Identifiers and Description

Gene Model Identifier

TTHERM_00579220

Standard Name

RAB2D (RAB GTPase 2D)

Aliases

PreTt05815 | 78.m00187 | 3733.m00082

Description

RAB2D small guanosine triphosphatase family (GTPase)-like Ras family protein; Rab II family protein; small monomeric GTPase that regulates membrane fusion and fission events

Genome Browser (Macronucleus)

Full Screen View

No Genome Browser Data Present

Genome Browser (Micronucleus)

Full Screen View

No Genome Browser Data Present

External Links

• Uniprot
• Alphafold

Gene Ontology Annotations

Cellular Component

• intracellular anatomical structure (IEA) | GO:0005622

Molecular Function

• GTP binding (IEA) | GO:0005525

Biological Process

• small GTPase-mediated signal transduction (IEA) | GO:0007264

Domains

• ( PF00025 ) ADP-ribosylation factor family
• ( PF00071 ) Ras family
• ( PF01926 ) 50S ribosome-binding GTPase
• ( PF08477 ) Ras of Complex, Roc, domain of DAPkinase
• ( TIGR00137 ) tRNA:m(5)U-54 methyltransferase
• ( TIGR00231 ) small GTP-binding protein domain

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

No results were calculated for this gene in GeneMania.

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source	Identifier	Score
Tetrahymena borealis	EI9_16334.1	1.000211181581171e-120
	Description: Ras-like protein Rab-2A (236 aa)
Tetrahymena borealis	EI9_18265.1	1.000211181581171e-120
	Description: hypothetical protein (469 aa)
Oxytricha	Contig9955.0.g63	2.000597631390999e-64
	Description: Ras family
WormBase	WBGene00006833	8.000035279590482e-64
	Description: locus:unc-108 status:Confirmed UniProt:O01577 protein_id:CCD66422.1
DictyBase	DDB_G0292268	3.998564387823535e-58
	Description: rab2A on chromosome: 6 position 1422661 to 1423817
SGD	YER031C	6.002524403568988e-55
	Description: YPT31 Rab family GTPase, very similar to Ypt32p; involved in the exocytic pathway; mediates intra-Golgi traffic or the budding of post-Golgi vesicles from the trans-Golgi
Stentor Coeruleus	SteCoe_11568	2.9374821117108028e-30
	Description: None

General Information

No Data fetched for General Information

Associated Literature

1. Ref:16933976: Eisen JA, Coyne RS, Wu M, Wu D, Thiagarajan M, Wortman JR, Badger JH, Ren Q, Amedeo P, Jones KM, Tallon LJ, Delcher AL, Salzberg SL, Silva JC, Haas BJ, Majoros WH, Farzad M, Carlton JM, Smith RK, Garg J, Pearlman RE, Karrer KM, Sun L, Manning G, Elde NC, Turkewitz AP, Asai DJ, Wilkes DE, Wang Y, Cai H, Collins K, Stewart BA, Lee SR, Wilamowska K, Weinberg Z, Ruzzo WL, Wloga D, Gaertig J, Frankel J, Tsao CC, Gorovsky MA, Keeling PJ, Waller RF, Patron NJ, Cherry JM, Stover NA,

Sequences

>TTHERM_00579220(coding)
ATGAATTAGTACGACTATTTATTTAAGTTCATCATTATCGGAAATACAAGTGTTGGGAAA
TCTTGCATTCTTTCTTAGTTTACTGAAAACAGATTTAAAAGAGAACACGATGCGACTATA
GGAGTTGAATTTGGTTCAAAAAATATAGAGGTTGATGGATACACTATTAAAATATAAATA
TGGGATACAGCAGGATAGGAATCATTTAGAAGTATCACAAGATCCTACTACAGAGGATCT
GTTGGCGCTTTACTAGTTTATGATGTGACAAAAGAAGATAGCTTCTAAGATTTAAACAAA
TGGATCAGTGATGTCTCTGAAAACGCTAATAAAGATTTATCAGTAGCTGTTTTAGGCAAC
AAAATTGATTTAGATAATCGTGAAGTAAAAGCAAAAGATGGTGAAGCATTTGCATCAGAA
AGAAATTTTCTTTTCTTTGAAACATCAGCTTTAAATGGAGATAATATTGGTGAGGCTTTT
TATGCATTAGCTAAACATGTATTAGATAGAATTATAGAAAAGCAAATAGATTTAACAGAT
CAAGTAATAATAATAGATAAATAAAAAAATATAGTTTTAATTTTAATAATAATAATAATA
ATAATAATAGAGCAGTGGAGTAAAAGTAGGAGCTAAAAGGGGAAAGCAAAAGAATTTTAT
ATAGAATTAAGTATAAAATACAGCTATAGAAAGCTAAAAATAGAATATAGAATTAGATCA
AAGCAGCGAATCTATCTCTATATCCAAAAAAGGATAAAATTGCAGTTGTTGAAAAATTAA
AATCATTTCTAAACAATAAAATTTAAAAAATTAGCTTTTGTTATGTCATATATAGATAGA
TACTGCTAAAGCGAAAGTAACAAATAAGTTCTAATTTTAAATACAAGTTCTTTCTAAATT
TAAAATAAAATGTAATAATAAATTAACACAAGGCAATTCATTAAATTATTTCTGTATTAA
AATAAATTGTCTCTTTATGTAATATATAAAGTTTTATATCTCTTTTAAAAAAATTACTAT
TTATAATTGTTCAAATTATATTCAAATTCTTCAAACATAAGAATTCAACAGAAATAAAAA
TAAAAAATATATGTGAAAATCTAAAAATTAATCAAGATGCTTATTCAAATTTTAGAAATT
ATATTGCCATTTCTCATAAATGAAAGCTTCAATATAATTAACATTCAAAAGCATTTTATT
AAAAAAAAACTATTTATTTATTTATACAAATTTATCAATAAAATACTTAATTTGTAAGAA
TCTAAGGTATAGTATGGTTACAAAATAGTAAAATAAAATTGTTAATATTTTTTTGAAATA
TTTATTCAAAAAATAAATTATTAAAGTGTTAAAAAAAATTATTTAGATATAGCTTCAAAA
TTAACTTTTTCAAAAATCAAACATCAAGATTAAAAAATCATAATATTAAAATAAAAAGAT
AAATTAATTTAGATTTTGCTAAGAATTGTTAAATAGTTTTTGAAAAATTTTCTTTGCCTT
TTAAGTAATAAATAAATAAATTAATTACTTATATAATTAGTTTAATTATTACACATACTT
GAAAATAAATACAAATAATTAAAATGA

>TTHERM_00579220(gene)
ATGAATTAGTACGACTATTTATTTAAGTTCATCATTATCGGAAATACAAGTAATTTTAAG
TTGTTAAACAAAACATTTTAGCTATGTTTCAATGCTATAGAGTTTATCCTACATATAAAA
ATGAACTACTTATTTTTATAAATAAATAAATAAATACATCAATATTTTATTAATAGGTGT
TGGGAAATCTTGCATTCTTTCTTAGTTTACTGAAAACAGATTTAAAAGAGAACACGATGC
GACTATAGGAGTTGAATTTGGTTCAAAAAATATAGAGGTTGATGGATACACTATTAAAAT
ATAAATATGGGATACAGTAATTAATTGCTAGAAATTTTCAAATTATAAAGCTTATCATTT
ATAATTATGTAAATAGGCAGGATAGGAATCATTTAGAAGTATCACAAGATCCTACTACAG
AGGGTAAATTATATATAACATTATTTTATAGAATTAAATTAATGAAATTTCCTTAAAATA
GATCTGTTGGCGCTTTACTAGTTTATGATGTGACAAAAGAAGATAGCTTCTAAGATTTAA
ACAAATGGATCAGTGATGTCTCTGAAAACGCTAATAAAGATTTATCAGTAGCTGTTTTAG
GCAACAAAATTGATTTAGATAAGTAATATTTATCAATCAACTTTTTTTATTTTGATTGAG
AAAATAAAATATATTTAATCTTAACTTCCTTAACTTAGTCGTGAAGTAAAAGCAAAAGAT
GGTGAAGCATTTGCATCAGAAAGAAATTTTCTTTTCTTTGAAACATCAGCTTTAAATGGA
GATAATATTGGTGAGGCTTTTTATGCATTAGCTAAACATGTATTAGATAGAATTATAGAA
AAGCAAATAGATTTAACAGATCAAGTAATAATAATAGATAAATAAAAAAATATAGTTTTA
ATTTTAATAATAATAATAATAATAATAATAGAGCAGTGGAGTAAAAGTAGGAGCTAAAAG
GGGAAAGCAAAAGAATTTTATATAGAATTAAGTATAAAATACAGCTATAGAAAGCTAAAA
ATAGAATATAGAATTAGATCAAAGCAGCGAATCTATCTCTATATCCAAAAAAGGATAAAA
TTGCAGTTGTTGAAAAATTAAAATCATTTCTAAACAATAAAATTTAAAAAATTAGCTTTT
GTTATGTCATATATAGATAGATACTGCTAAAGCGAAAGTAACAAATAAGTTCTAATTTTA
AATACAAGTTCTTTCTAAATTTAAAATAAAATGTAATAATAAATTAACACAAGGCAATTC
ATTAAATTATTTCTGTATTAAAATAAATTGTCTCTTTATGTAATATATAAAGTTTTATAT
CTCTTTTAAAAAAATTACTATTTATAATTGTTCAAATTATATTCAAATTCTTCAAACATA
AGAATTCAACAGAAATAAAAATAAAAAATATATGTGAAAATCTAAAAATTAATCAAGATG
CTTATTCAAATTTTAGAAATTATATTGCCATTTCTCATAAATGAAAGCTTCAATATAATT
AACATTCAAAAGCATTTTATTAAAAAAAAACTATTTATTTATTTATACAAATTTATCAAT
AAAATACTTAATTTGTAAGAATCTAAGGTATAGTATGGTTACAAAATAGTAAAATAAAAT
TGTTAATATTTTTTTGAAATATTTATTCAAAAAATAAATTATTAAAGTGTTAAAAAAAAT
TATTTAGATATAGCTTCAAAATTAACTTTTTCAAAAATCAAACATCAAGATTAAAAAATC
ATAATATTAAAATAAAAAGATAAATTAATTTAGATTTTGCTAAGAATTGTTAAATAGTTT
TTGAAAAATTTTCTTTGCCTTTTAAGTAATAAATAAATAAATTAATTACTTATATAATTA
GTTTAATTATTACACATACTTGAAAATAAATACAAATAATTAAAATGA

>TTHERM_00579220(protein)
MNQYDYLFKFIIIGNTSVGKSCILSQFTENRFKREHDATIGVEFGSKNIEVDGYTIKIQI
WDTAGQESFRSITRSYYRGSVGALLVYDVTKEDSFQDLNKWISDVSENANKDLSVAVLGN
KIDLDNREVKAKDGEAFASERNFLFFETSALNGDNIGEAFYALAKHVLDRIIEKQIDLTD
QVIIIDKQKNIVLILIIIIIIIIEQWSKSRSQKGKAKEFYIELSIKYSYRKLKIEYRIRS
KQRIYLYIQKRIKLQLLKNQNHFQTIKFKKLAFVMSYIDRYCQSESNKQVLILNTSSFQI
QNKMQQQINTRQFIKLFLYQNKLSLYVIYKVLYLFQKNYYLQLFKLYSNSSNIRIQQKQK
QKIYVKIQKLIKMLIQILEIILPFLINESFNIINIQKHFIKKKLFIYLYKFINKILNLQE
SKVQYGYKIVKQNCQYFFEIFIQKINYQSVKKNYLDIASKLTFSKIKHQDQKIIILKQKD
KLIQILLRIVKQFLKNFLCLLSNKQINQLLIQLVQLLHILENKYKQLK