Identifiers and Description

Gene Model Identifier

TTHERM_00579280

Standard Name

RPC25 (DNA-dependent RNA polymerase III subunit Rpc25 )

Aliases

PreTt05821 | 78.m00193 | 3733.m00088

Description

RPC25 RNA polymerase Rpb7 amine-terminal domain protein; DNA-dependent RNA polymerase III subunit

Genome Browser (Macronucleus)

Full Screen View

No Genome Browser Data Present

Genome Browser (Micronucleus)

Full Screen View

No Genome Browser Data Present

External Links

• Uniprot
• Alphafold

Gene Ontology Annotations

Molecular Function

• DNA-directed 5'-3' RNA polymerase activity (IEA) | GO:0003899

Biological Process

• transcription (IEA) | GO:0006350

Domains

• ( PF03293 ) Poxvirus DNA-directed RNA polymerase, 18 kD subunit
• ( PF03876 ) SHS2 domain found in N terminus of Rpb7p/Rpc25p/MJ0397
• ( PF08292 ) RNA polymerase III subunit Rpc25
• ( TIGR00448 ) DNA-directed RNA polymerase

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

No results were calculated for this gene in GeneMania.

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source	Identifier	Score
Tetrahymena borealis	EI9_16339.1	1.9992982665753866e-121
	Description: RNA polymerase Rpb7 domain-containing protein (217 aa)
SGD	YKL144C	0.00000000002000577768187062
	Description: RPC25 RNA polymerase III subunit C25, required for transcription initiation; forms a heterodimer with Rpc17p; paralog of Rpb7p
WormBase	WBGene00014111	0.00000000007999955850159168
	Description: locus:rpc-25 status:Partially_confirmed UniProt:Q23645 protein_id:CAA94858.1
DictyBase	DDB_G0273425	0.000000009996807949091551
	Description: rpc25-1 on chromosome: 2 position 2980579 to 2981451
Oxytricha	Contig21831.0.g92	0.000000009996807949091551
	Description: SHS2 domain found in N terminus of Rpb7p/Rpc25p/MJ0397

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>TTHERM_00579280(coding)
ATGTTTATTTTATGCACTAAAAGAGAAAAGATCAGACTTAAACCTGACAGTCTTGGAAAG
GATTACCAAAAAAACATTACAAAATTATTATATGAAACATATTTATTCAAGGCAATTAAT
GAAAATGAGGTTATTGTAGCTATTAAAGATGTTACTCTGTATGATGGATTTGTAGAATAA
GTAACAGGAGAAGTCGTTTTCGAAATCTAAATGACTTATCTCGTCCAGTAAATAGTTTAA
AATGAAGTCTATGAAGGAACAATCGTTTCATAAAATGCTAAAGGAATTACTGTTAAATTT
GGATAGCTCTAGGCTTTTATTGGTAAACATCTACTTCAGCCAAACTCTACATTTTTCAAG
GATAAAAACGAATGGATTTGGTAGAATGATGAAGAAGACAGCTCTAGCGTGCTCTTCTAT
GAAGCAGATGCTTAGGTTAAATTCAAAATATTTGCCATTAATTTCTTGGCGAAGATTGAC
GAAGTTAACCCAGAAGGATAAAAGCAAATCATAGGTGCGATGAATGAAGATGGCCTTGGT
TTGATATAATGGTGGGATTTCTGA

>TTHERM_00579280(gene)
ATGTTTATTTTATGCACTAAAAGAGAAAAGATCAGACTTAAACCTGACAGTCTTGGAAAG
GATTACCAAAAAAACATTACAAAATTATTATATGAAACATATTTATTCAAGGTGCGAACT
ATTTACTAAATTAACCAATCAATCATTAATTGCTTGAATTTAATGAATTTTTTATTTACT
AATACACTTCATATTTATTAATACAAAATATTATTCAAAAGGCAATTAATGAAAATGAGG
TTATTGTAGCTATTAAAGATGTTACTCTGTATGATGGATTTGTAGAATAAGTAACAGGAG
AAGTCGTTTTCGAAGTAAGTTGCGCAATTAAATTTATAGATTATAATAAATTTATTATTG
TTCAAAACTAGATCTAAATGACTTATCTCGTCCAGTAAATAGTTTAAAATGAAGTCTATG
AAGGAACAATCGTTTCATAAAATGCTAAAGGAATTACTGGTAAAATTAAAATTATTCTTT
TTTTGAAAAAATAAAAAAAACCTTAATCTACTTAATGTTTTTAATTCTCAATCAATAATT
AAATATTTCTCATTTAAATTTAATTAATTAAGTTAAATTTGGATAGCTCTAGGCTTTTAT
TGGTAAACATCTACTTCAGCCAAACTCTACATTGTATCTTTTTTCTTATATTTAATATAT
ATATTTACATTTATTTATTAATCATTACGAAATATCTTTTAATTTTTTAATTCATTTGAT
TAACTCTTCTAATAACAGCAAACTTATTTTAAAATACTTGTTTAGATAATTCAAAACGTA
TTTTTAATAGTTTTTATTTAAATTTCATACATAAAATAGTTTCAAGGATAAAAACGAATG
GATTTGGTAGAATGATGAAGAAGACAGCTCTAGCGTGCTCTTCTATGAAGCAGATGCTTA
GGTTAAATTCAAAATATTTGCCATTAATTTCTGTAATTTTAATTAATTTAAACAATTTTC
GTTTTGTATTAATAATTTTCTTTAAACAACAAAAGTGGCGAAGATTGACGAAGTTAACCC
AGAAGGATAAAAGCAAATCATAGTATTTTATTATTTTGAACATAAATTGCTTAATAAAGT
TCATGTGTAAATTTTATCTCTAAAATTCATAAAAAATAGGGTGCGATGAATGAAGATGGC
CTTGGTTTGATATAATGGTGGGATTTCTGA

>TTHERM_00579280(protein)
MFILCTKREKIRLKPDSLGKDYQKNITKLLYETYLFKAINENEVIVAIKDVTLYDGFVEQ
VTGEVVFEIQMTYLVQQIVQNEVYEGTIVSQNAKGITVKFGQLQAFIGKHLLQPNSTFFK
DKNEWIWQNDEEDSSSVLFYEADAQVKFKIFAINFLAKIDEVNPEGQKQIIGAMNEDGLG
LIQWWDF