Identifiers and Description

Gene Model Identifier

TTHERM_00590200

Standard Name

CLP1

Aliases

PreTt24135 | 81.m00192 | 3726.m00068

Description

CLP1 Pre-mRNA cleavage complex II protein Clp1 putative; pre-mRNA cleavage complex II protein

Genome Browser (Macronucleus)

Full Screen View

No Genome Browser Data Present

Genome Browser (Micronucleus)

Full Screen View

No Genome Browser Data Present

External Links

• Uniprot
• Alphafold

Gene Ontology Annotations

No Data fetched for Gene Ontology Annotations

Domains

No Data fetched for Domains

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

No results were calculated for this gene in GeneMania.

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source	Identifier	Score
Tetrahymena borealis	EI9_16966.1	9.997093137033517e-262
	Description: hypothetical protein (505 aa)
Oxytricha	Contig11030.0.g71	4.000437458487249e-40
	Description: Molybdopterin guanine dinucleotide synthesis protein B
WormBase	WBGene00010304	3.999970367130025e-21
	Description: locus:clpf-1 Protein clpf-1 status:Confirmed UniProt:P52874 protein_id:CAA84329.1
DictyBase	DDB_G0285507	2.000769134519826e-18
	Description: clp1 on chromosome: 4 position 3327387 to 3328942
SGD	YOR250C	0.00000000030007160092483236
	Description: CLP1 Subunit of cleavage factor I (CFI), involved in both the endonucleolyitc cleavage and polyadenylation steps of mRNA 3-end maturation

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>TTHERM_00590200(coding)
ATGATGGAAGAATAGTTCATATGCGATGAAAAAAAGTTTATTAGATAGGAGGTAGAAAAA
ATGAGGGAATTTTCATTTAACATAAATAATGAAGATGGTTTAAAACTCTTTCTGAAAGAG
GGTACTGCTGAAATCTTCGGTAGAGAATTACCACAATATACAATTTAATAATTTTAAAAG
GGAGATCGTTTTTCAATATTTACATGGACAGGCTGTGTACTCTATTTAGAATATATGAGT
CATTCTGACTTCTTTTAGTCTACAGATGAGTCACAGTATCCCATATATGCAAACATAAAT
TAATATTTACACGAAATGAGATCATAAGCATAAGATTAGCGTAAAATAGGCCCTAAAATT
TTAATATGTGGACCAAACTAAAGTGGAAAAACAACTGTTTCAAAGACACTGACTAACTAT
TGCTGTAAGCTGGGATGGACTCCTATTTTAGTTGATTTAGACCCTATGCTTAATACAGTG
ATGGCAGGAGGATGTATTGGAGCTTGTGTCTGCAAAGACTCTTATCCTACAAATGGAATA
GAAATTAAAAATAAAATTATATTCTTTCATGGATACAGTCGCATTCAATTAGGCCTTCTT
AAGAATTAGATAGAAGTCTTAGGAAACACAGTTCAAAAAAAGCTCTAAAATAACTTAGAA
TAATTCCTTAAAAAGCATAACTTGCAAACTGCTCCAGATGCAGAAGGAGCCTAACAGAAG
ACCAACAAATAAAAATATCCATCGTAATAAAATATTTAAAACTCAACTGCATAGATTAAA
CTACCATCAGGTGTCAACATAAATTAAATGCTGTTACTCCCTTAAGACAAGCAAATGTTT
TCAAGTGGATGCATAATTAATATGCCTCCTCTCTAATCTAGAGAATAGAAAGAAGTTATT
GACCTTATCATAAAACATTTTCAAGTTGATGTGATAATTGGTCTAGACGATTAAGTATTT
AATTCTTTAAAGCAAAACTAGCTTTTGACTAATGGATATAGTGTTATACGTACCACAAAA
CCTTCAGGATTAAAAACTAAAGAAGAGTCAGAGCTAGTTGAGGAAGCTAGAAAAATAAAT
TAAAAGCTCTTTTAATAGTACTTTAAAGGACTTAATAATGACATTGATTGTCATAATTAA
GAAGTTAACTTAAATGATTTACTTGTTTATAGATTAAAAATAAATGAAAAAAATAGCTTA
GCAAATACTTCAATGTAATAATAAAAGCAAATTTATGAAAGAGTTGATCTTTCCAAAGAA
AATGTGACAAAGAGTATAGTTGGCGTACTAAACCTTACAAGATCCTCTGTTGAAAAATTA
AAAGAAGAAGAAATATTTGAAAAAATATCTAAAAGTACTCTCAGTCTTTTGGTTCATTTA
TCAGATATGAGAACAAACCAGCCCTATGTACGTTTGTTTTTACCTGGGCTAAATATGGAA
AATATAATTAAAGAAAATGTATGTGTAATAGGAGACATAACATGGTTTGAATCATCAAGT
GATAAAAAAAAATGA

>TTHERM_00590200(gene)
ATGATGGAAGAATAGTTCATATGCGATGAAAAAAAGTTTATTAGATAGGAGGTAGAAAAA
ATGAGGGAATTTTCATTTAACATAAATAATGAAGATGGTTTAAAACTCTTTCTGAAAGAG
GGTACTGCTGAAATCTTCGGTAGAGAATTACCACAATATACAATTTAATAATTTTAAAAG
GGAGATCGTTTTTCAATATTTACATGGACAGGCTGTGTACTCTATTTAGAATATATGAGT
CATTCTGACTTCTTTTAGTCTACAGATGAGTCACAGTATCCCATATATGCAAACATAAAT
TAATATTTACACGAAATGAGATCATAAGCATAAGATTAGCGTAAAATAGGCCCTAAAATT
TTAATATGTGGACCAAACTAAAGTGGAAAAACAACTGTAAGTACTTCTTATTGATTTTCA
TTCAGTGATTGAATACTTAATATTTTAGTTAGAGCAAATTATATTATAAATGAAGATAAA
TTTGAGTAAATCTTTCGCTTGCATAGCAGCGAGAGAGTATTAAATTCATTTATTTTTGTT
ATAATTATTAGGTTTCAAAGACACTGACTAACTATTGCTGTAAGCTGGGATGGACTCCTA
TTTTAGTTGATTTAGACCCTATGCTTAATACAGTGATGGCAGGAGGATGTATTGGAGCTT
GTGTCTGCAAAGACTCTTATCCTACAAATGGAATAGAAATTAAAAATAAAATTATATTCT
TTCATGGATACAGTCGCATTCAATTAGGCCTTCTTAAGAATTAGATAGAAGTCTTAGGAA
ACACAGTTCAAAAAAAGCTCTAAAATAACTTAGAATAATTCCTTAAAAAGCATAACTTGC
AAACTGCTCCAGATGCAGAAGGAGCCTAACAGAAGACCAACAAATAAAAATATCCATCGT
AATAAAATATTTAAAACTCAACTGCATAGATTAAACTACCATCAGGTGTCAACATAAATT
AAATGCTGTTACTCCCTTAAGACAAGCAAATGTTTTCAAGTGGATGCATAATTAATATGC
CTCCTCTCTAATCTAGAGAATAGAAAGAAGTTATTGACCTTATCATAAAACATTTTCAAG
TTGATGTGATAATTGGTCTAGACGATTAAGTATTTAATTCTTTAAAGCAAAACTAGCTTT
TGACTAATGGATATAGTGTTATACGTACCACAAAACCTTCAGGATTAAAAACTAAAGAAG
AGTCAGAGCTAGTTGAGGAAGCTAGAAAAATAAATTAAAAGCTCTTTTAATAGTACTTTA
AAGGACTTAATAATGACATTGAGTATTTTTTTTTTCATTCATTCATTTTTTCTTTAAAAA
TTTTTAAGCTAAATCAAAATAAATTCATCATAAAAGTCTTTCAATTTATAAATTTTCTAA
CAATTTAATCTTTATGAAATGCTAATTTTAAGTCTCCTAATAAGATTACTAAAATAATTT
TATGAATAAGCAATAAATAAACTTCATACATAAAAATATTTAATTAATTAAATTCTAAAA
AATTAGGTTTTTTATATAAATTGCTTATATTTTTAATTAAGCAAAAGATTTATTTAAATA
TTTAATTATGTTTGAATAAACTCTTATATTTGCTTCAATTTAAGATGATTTTATTTTTGA
TATTTCAATTTCCAAATAAATTTAACGATTTTTAAGATATTTTAATAAAATTTTTATATT
ATAAAATAGTTGTCATAATTAAGAAGTTAACTTAAATGATTTACTTGTTTATAGATTAAA
AATAAATGAAAAAAATAGCTTAGCAAATACTTCAATGTAATAATAAAAGCAAATTTATGA
AAGAGTTGATCTTTCCAAAGAAAATGTGACAAAGAGTATAGTTGGCGTACTAAACCTTAC
AAGATCCTCTGTTGAAAAATTAAAAGAAGAAGAAATATTTGAAAAAATATCTAAAAGTAC
TCTCAGTCTTTTGGTTCATTTATCAGATATGAGAACAAACCAGCCCTATGTACGTTTGTT
TTTACCTGGGCTAAATATGGAAAATATAATTAAAGAAAATGTATGTGTAATAGGAGACAT
AACATGGTTTGAATCATCAAGTGATAAAAAAAAATGA

>TTHERM_00590200(protein)
MMEEQFICDEKKFIRQEVEKMREFSFNINNEDGLKLFLKEGTAEIFGRELPQYTIQQFQK
GDRFSIFTWTGCVLYLEYMSHSDFFQSTDESQYPIYANINQYLHEMRSQAQDQRKIGPKI
LICGPNQSGKTTVSKTLTNYCCKLGWTPILVDLDPMLNTVMAGGCIGACVCKDSYPTNGI
EIKNKIIFFHGYSRIQLGLLKNQIEVLGNTVQKKLQNNLEQFLKKHNLQTAPDAEGAQQK
TNKQKYPSQQNIQNSTAQIKLPSGVNINQMLLLPQDKQMFSSGCIINMPPLQSREQKEVI
DLIIKHFQVDVIIGLDDQVFNSLKQNQLLTNGYSVIRTTKPSGLKTKEESELVEEARKIN
QKLFQQYFKGLNNDIDCHNQEVNLNDLLVYRLKINEKNSLANTSMQQQKQIYERVDLSKE
NVTKSIVGVLNLTRSSVEKLKEEEIFEKISKSTLSLLVHLSDMRTNQPYVRLFLPGLNME
NIIKENVCVIGDITWFESSSDKKK