Identifiers and Description

Gene Model Identifier

TTHERM_00600630

Standard Name

RRM38 (RNA recognition motif-containing protein 38)

Aliases

PreTt22126 | 83.m00195 | 3685.m00087

Description

RRM38 RNA recognition motif (RRM) superfamily protein

Genome Browser (Macronucleus)

Full Screen View


Genome Browser (Micronucleus)

Full Screen View

External Links

Gene Ontology Annotations

No Data fetched for Gene Ontology Annotations

Domains

  • ( PF00076 ) RNA recognition motif
  • ( PF04702 ) Vicilin N terminal region
  • ( PF04950 ) 40S ribosome biogenesis protein Tsr1 and BMS1 C-terminal

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source Identifier Score
Tetrahymena borealis EI9_14920.1 9.997093137033517e-262
Description: RNA recognition domain-containing protein domain-containing protein (942 aa)
Stentor Coeruleus SteCoe_21798 0.00000000027894680928689246
Description: None
Oxytricha Contig1235.1.g124 0.000000009000371344152433
Description: RNA recognition motif_ (a_k_a_ RRM, RBD, or RNP domain)
SGD YER165W 0.0004999512321494991
Description: PAB1 Poly(A) binding protein, part of the 3-end RNA-processing complex, mediates interactions between the 5 cap structure and the 3 mRNA poly(A) tail, involved in control of poly(A) tail length, interacts with translation factor eIF-4G

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences 

>TTHERM_00600630(coding)
ATGAGTTAAGGCGAAGAAACTTTCAAAAGCTTATCTGCCGCATTGGAAGGCTTGAAAAAC
AGTCAATCTCTAGCATACTTTTAGTAATAGAATGCTGATCCTTACAATTAAATGCATAAA
TAAAAAAATACCTACAACAGCAATTATCTTACACAAGATGAGTAGAATCTTCATTATCTT
GAGGATTCTCCTGAGCCAGAGCATTTTGAATTCTAGAATGTGAACGACCCTCATGAATAA
CTTAACTAGATGTATCAAAGTAGATAAATCTATAAGTAGCAATAATAGGGTGCAGGATTT
TAGAGTTCTTAAAAGCCTTACTATAAAAATAACTATGAAGGTACCCAAGGTAGTCATAGA
TAGTATAATAATCCATAATCTTATAACTAAGCTGCTTAAAGTCACACTAATGGTTATCAA
GGTTAAAGAGTATCTAATTACAACAGATATCAAGGCTAGCAAACTGGCTATTAAGGATAA
AACTATATTCCTAATGAAAGAAACTTTTCACAAGGAGCAAAATATCAAGGTTAAAAACCT
CCAGGCGCTTTTAATGCTCATCATTAGAACCAATTTAACAACCAAAATTCGCAATAGCAA
GGATAACAATATCATGGTCATTCAAATACATTCCCCTAAGGAGAAAAGTCAGCAGGTGGT
ATTCATATTGAAGGTACAAAGATATTTATAAATAATATTGAACCCACTGTGAGCTAAGAA
GAAATTCACCACTATTTTGATCCTTATGGAAAGATCAATGATTTAAAAGTATTCCACAGA
AATGGGTAAAACTATGCTTATGTTATTTTTGAGAAGTACGAAGACGCTTTCAGAGCAACT
AATGATGTTTCTCCCTAACCTAATTGGACAGTATCATTAGCTAAGTCAAAGAACACAGTT
ATGCAGTATCAAAGATCAACACTTTTCGAATAAGATGGTTAAAATCCTAATCCTCCATAT
ACAGGCACAAGCAAATATAATAATCCTGCAGGAAATCCACCTCATTTCAAAAAGCCATTT
AATAAATATTAATAAAATCCTAACATACAAAACCAACATCCAAATCCAAGATATGAAAAA
TCTGCAGGCACCAACTTTAGCCAAAACTAGTATGAATCATCTAATGGGGAAAAAATTCTT
TAAAATATCAGTAATTTCAATGATAATAATGCAAATGGTCATAATAACTTAGGAGAAGTT
CTTTCCAACCATAAAACTTAAATTAACTAAACTATCTTAGTTAGAGAAATCTGGGTGAGC
AACATAGATGAAAAGTGCAAGCCTTATATTAGAGAAATTATTGAAGACTTCTTTGGAGGT
ATAGAAGAGGTAGAGTTCTTTGATAGAGGCAAAGACTCTTTTGCATTTATAAAATTTTTT
ATGGTTTAAACTGCTTATTTAGCTTTTACAAATAAGGAAAAAATTGCAGAACTTCTTGAG
ACAGATTAAGTAAAATTAACATACTCTGATCCTTCTAGAAGAAAAAATATCATTGGTGAT
CACGAAGATTATATGAGAGATGAAAATTTATCTCCTGTTTTGTATATCAGTTTCCCTTAT
GGTTTCAAAGTGAAAAAAAGTGTCATCTAAAAAATTGCCAGTGACTACGGAACAGTATTA
AACGTTACTTTGAAGAGAAGTGAAGATCCTAAATAAACTTCCAGTGTTTTAGTAGAATTC
TAGGATTTAAAAGATGCTAAATTTGCTTTCAAACATATGAGAGAAGATCATGATAAGATG
CATCCTAAATGTGAATTTGCAATTTTGCTCAATTCTGAAAAGTTTGTTAAAGAAAACAAT
TTAAAACTCAAAGAAAAAATCAAACCTACTGTATTACCTGGGTAAGCACCAACAACTACT
TTCATTTAGTAAAAGCCTTTAGCTAGAAAACCTATTAATATAAATGAAAACGCTAATAAT
GCTTTATCAGATATAGCTGGTATTCGAATTTAAAAGTAACTTTAGTCCAAAGGAAGATAG
TTTTCTCCTGAAAAAGATGCTGAAATAAATTAAAAACGTACTTATAATTAATTCAAGCAA
AGTTCTTTAAATACAAGCTAGGATTAAGGTTATAATCCGGATGAGTAAGATGCAGAATTA
CTTGTAGAAGACGACGATGATGAAAATTTCATTTGGTCTGGTTTCATTTCAATTAATAAA
AAGGGTAGATGTGGTATGGATGCAAAAGTAATCTAAAGCCAAGGCTAATTAGATCTTGAT
ACTTATAATCTCGTGATGACTACTAAATGTTAGCTTTCTGAGCCCTTGAGATATCCCCCT
TATTCAGTACTTATATTTAGACCTTCAAACGAAACAGAAAAGAAACCTTTCAAAGATGTT
AAAACATTTTTGAATAGCAACCCTAATTAAGCTGGTGTAATTCACACTAAAAATCTTATA
ATTTATATGTTCCCATCTAATGAGTAAGCCTTAAAATTCTACCCTCAACTCAAAGAAGGA
AATATTTTAGCTCTATGTCACAACCAAGACTCTATCAGAGGGAATTTATCAAAGAAAGAA
GGAAAGTATGATGAAAAATTGTAAGCAAGATAAAAAGCTGCTTTGAATGATTCACATGAG
GATGACGAAGAAGATAATATGATTTATGATCCTACATCTATCTTACAAGATACATCAAAA
TATAATGGTAAAAAAGGTTAATAACAACACAGATATGAACATGATGAAGACAACTAATAC
TAAGAAGAAAATATTTATGATCCAAACAAAATAAATATGTAAAAAGATGATCCAAAAACT
GATATTTCTGACTTAATAGATAATCCCTCACTTATGGATAGCATGTTGAAGAGTTTGTAT
TGA


>TTHERM_00600630(gene)
ATGAGTTAAGGCGAAGAAACTTTCAAAAGCTTATCTGCCGCATTGGAAGGCTTGAAAAAC
AGTCAATCTCTAGCATACTTTTAGTAATAGAATGCTGATCCTTACAATTAAATGCATAAA
TAAAAAAATACCTACAACAGCAATTATCTTACACAAGATGAGTAGAATCTTCATTATCTT
GAGGATTCTCCTGAGCCAGAGCATTTTGAATTCTAGAATGTGAACGACCCTCATGAATAA
CTTAACTAGATGTATCAAAGTAGATAAATCTATAAGTAGCAATAATAGGGTGCAGGATTT
TAGAGTTCTTAAAAGCCTTACTATAAAAATAACTATGAAGGTACCCAAGGTAGTCATAGA
TAGTATAATAATCCATAATCTTATAACTAAGCTGCTTAAAGTCACACTAATGGTTATCAA
GGTTAAAGAGTATCTAATTACAACAGATATCAAGGCTAGCAAACTGGCTATTAAGGATAA
AACTATATTCCTAATGAAAGAAACTTTTCACAAGGAGCAAAATATCAAGGTTAAAAACCT
CCAGGCGCTTTTAATGCTCATCATTAGAACCAATTTAACAACCAAAATTCGCAATAGCAA
GGATAACAATATCATGGTCATTCAAATACATTCCCCTAAGGAGAAAAGTCAGCAGGTGGT
ATTCATATTGAAGGTACAAAGATATTTATAAATAATATTGAACCCACTGTGAGCTAAGAA
GAAATTCACCACTATTTTGATCCTTATGGAAAGATCAATGATTTAAAAGTATTCCACAGA
AATGGGTAAAACTATGCTTATGTTATTTTTGAGAAGTACGAAGACGCTTTCAGAGCAACT
AATGATGTTTCTCCCTAACCTAATTGGACAGTATCATTAGCTAAGTCAAAGAACACAGTT
ATGCAGTATCAAAGATCAACACTTTTCGAATAAGATGGTTAAAATCCTAATCCTCCATAT
ACAGGCACAAGCAAATATAATAATCCTGCAGGAAATCCACCTCATTTCAAAAAGCCATTT
AATAAATATTAATAAAATCCTAACATACAAAACCAACATCCAAATCCAAGATATGAAAAA
TCTGCAGGCACCAACTTTAGCCAAAACTAGTATGAATCATCTAATGGGGAAAAAATTCTT
TAAAATATCAGTAATTTCAATGATAATAATGCAAATGGTCATAATAACTTAGGAGAAGTT
CTTTCCAACCATAAAACTTAAATTAACTAAACTATCTTAGTTAGAGAAATCTGGGTGAGC
AACATAGATGAAAAGTGCAAGCCTTATATTAGAGAAATTATTGAAGACTTCTTTGGAGGT
ATAGAAGAGGTAGAGTTCTTTGATAGAGGCAAAGACTCTTTTGCATTTATAAAATTTTTT
ATGGTTTAAACTGCTTATTTAGCTTTTACAAATAAGGAAAAAATTGCAGAACTTCTTGAG
ACAGGTAAATATTTATTCTTCATAACATATTATTTTATTTTTATGAATCTGAAAAATTCA
AACAAATTTGATTTTTTCACCATTTCAATATCTATCTATCCTAAATAAAAATCCCTATTA
AAAAATCAAAATAAAATTCAAAAAATATAAAGATAAGAAATTAAAAAGAAAAGAAAAAAT
AAATCAAATCTAAAATTCGCGCGTAATAAAATAAATTAAAAATAATAAGAAAGTAAATCA
TAAATCTATAAAAAAGAAATAATAATAATAATAATAATTATAATAATAAATAAAACTCTT
ATCTGAAATTTAAAAGACAATCAAAAGAAAAATATTGGGGAATATCAAACCATAAATAAA
TAAATAAATAAATAAATAAACAAAAAAATAAAGACAAACGGGGGAATCATTTATGAATAA
TAAAATCTAATAAATACTAAATTTAAAAAAGATCATTTATATAAAGTTTTACAAAAGATA
AAAAATATCATCAACAAAAATAAAAATTTTACATTAGAATTTTACTTTCAAAAATTTTTA
AATAAAACTAAATGAAATTTAAATCAAATTTGTTAAAAAGACTTTATAAAAAGATAACAA
ACAAACATGATTTGTAAAATTAAATAACAGAAATGTGATAATTTTCTTAAGTAAAATATT
AATAAAATAATAAAACTTTAAGTGTGATATTTATTAATTAATTAATCAATATGAAAATCC
ATAGTTACAAAAATAAAAAATAATTTACCTAAAATCAAATAACACACACAACCAATTGTT
GGATGAATTTAATTTAAATTATAAAAATATAATTTAACTATTATAAAATATAAATTAAAA
TATAGATTAAGTAAAATTAACATACTCTGATCCTTCTAGAAGAAAAAATATCATTGGTGA
TCACGAAGATTATATGAGAGATGAAAATTTATCTCCTGTTTTGTATATCAGTTTCCCTTA
TGGTTTCAAAGTGAAAAAAAGTGTCATCTAAAAAATTGCCAGTGACTACGGAACAGTATT
AAACGTTACTTTGAAGAGAAGTGAAGATCCTAAATAAACTTCCAGTGTTTTAGTAGAATT
CTAGGATTTAAAAGATGCTAAATTTGCTTTCAAACATATGAGAGAAGATCATGATAAGAT
GCATCCTAAATGTGAATTTGCAATTTTGCTCAATTCTGAAAAGTTTGTTAAAGAAAACAA
TTTAAAACTCAAAGAAAAAATCAAACCTACTGTATTACCTGGGTAAGCACCAACAACTAC
TTTCATTTAGTAAAAGCCTTTAGCTAGAAAACCTATTAATATAAATGAAAACGCTAATAA
TGCTTTATCAGATATAGCTGGTATTCGAATTTAAAAGTAACTTTAGTCCAAAGGAAGATA
GTTTTCTCCTGAAAAAGATGCTGAAATAAATTAAAAACGTACTTATAATTAATTCAAGCA
AAGTTCTTTAAATACAAGCTAGGATTAAGGTTATAATCCGGATGAGTAAGATGCAGAATT
ACTTGTAGAAGACGACGATGATGAAAATTTCATTTGGTCTGGTTTCATTTCAGTAATTAT
TTTTTCAAAACTTTAATAAACTAAATTTATTTAAAAATCTTTTAACAGATTAATAAAAAG
GGTAGATGTGGTATGGATGCAAAAGTAATCTAAAGCCAAGGCTAATTAGATCTTGATACT
TATAATCTCGTGATGACTACTAAATGTTAGCTTTCTGAGCCCTTGAGATATCCCCCTTAT
TCAGTACTTATATTTAGACCTTCAAACGAAACAGAAAAGAAACCTTTCAAAGATGTTAAA
ACATTTTTGAATAGCAACCCTAATTAAGCTGGTGTAATTCACACTAAAAATCTTATAATT
TATATGTTCCCATCTAATGAGTAAGCCTTAAAATTCTACCCTCAACTCAAAGAAGGAAAT
ATTTTAGCTCTATGTCACAACCAAGACTCTATCAGAGGGAATTTATCAAAGAAAGAAGGA
AAGTATGATGAAAAATTGTAAGCAAGATAAAAAGCTGCTTTGAATGATTCACATGAGGAT
GACGAAGAAGATAATATGATTTATGATCCTACATCTATCTTACAAGATACATCAAAATAT
AATGGTAAAAAAGGTTAATAACAACACAGATATGAACATGATGAAGACAACTAATACTAA
GAAGAAAATATTTATGATCCAAACAAAATAAATATGTAAAAAGATGATCCAAAAACTGAT
ATTTCTGACTTAATAGATAATCCCTCACTTATGGATAGCATGTTGAAGAGTTTGTATTGA


>TTHERM_00600630(protein)
MSQGEETFKSLSAALEGLKNSQSLAYFQQQNADPYNQMHKQKNTYNSNYLTQDEQNLHYL
EDSPEPEHFEFQNVNDPHEQLNQMYQSRQIYKQQQQGAGFQSSQKPYYKNNYEGTQGSHR
QYNNPQSYNQAAQSHTNGYQGQRVSNYNRYQGQQTGYQGQNYIPNERNFSQGAKYQGQKP
PGAFNAHHQNQFNNQNSQQQGQQYHGHSNTFPQGEKSAGGIHIEGTKIFINNIEPTVSQE
EIHHYFDPYGKINDLKVFHRNGQNYAYVIFEKYEDAFRATNDVSPQPNWTVSLAKSKNTV
MQYQRSTLFEQDGQNPNPPYTGTSKYNNPAGNPPHFKKPFNKYQQNPNIQNQHPNPRYEK
SAGTNFSQNQYESSNGEKILQNISNFNDNNANGHNNLGEVLSNHKTQINQTILVREIWVS
NIDEKCKPYIREIIEDFFGGIEEVEFFDRGKDSFAFIKFFMVQTAYLAFTNKEKIAELLE
TDQVKLTYSDPSRRKNIIGDHEDYMRDENLSPVLYISFPYGFKVKKSVIQKIASDYGTVL
NVTLKRSEDPKQTSSVLVEFQDLKDAKFAFKHMREDHDKMHPKCEFAILLNSEKFVKENN
LKLKEKIKPTVLPGQAPTTTFIQQKPLARKPININENANNALSDIAGIRIQKQLQSKGRQ
FSPEKDAEINQKRTYNQFKQSSLNTSQDQGYNPDEQDAELLVEDDDDENFIWSGFISINK
KGRCGMDAKVIQSQGQLDLDTYNLVMTTKCQLSEPLRYPPYSVLIFRPSNETEKKPFKDV
KTFLNSNPNQAGVIHTKNLIIYMFPSNEQALKFYPQLKEGNILALCHNQDSIRGNLSKKE
GKYDEKLQARQKAALNDSHEDDEEDNMIYDPTSILQDTSKYNGKKGQQQHRYEHDEDNQY
QEENIYDPNKINMQKDDPKTDISDLIDNPSLMDSMLKSLY