Identifiers and Description

Gene Model Identifier

TTHERM_00600670

Standard Name

LSD2

Aliases

PreTt22130 | 83.m00199 | 3685.m00091

Description

flavin containing family amine oxidase

Genome Browser (Macronucleus)

Full Screen View

No Genome Browser Data Present

Genome Browser (Micronucleus)

Full Screen View

No Genome Browser Data Present

External Links

• Uniprot
• Alphafold

Gene Ontology Annotations

Molecular Function

• electron transfer activity (IEA) | GO:0009055
• oxidoreductase activity (IEA) | GO:0016491

Domains

• ( PF01266 ) FAD dependent oxidoreductase
• ( PF01593 ) Flavin containing amine oxidoreductase
• ( PF03778 ) Protein of unknown function (DUF321)
• ( TIGR00031 ) UDP-galactopyranose mutase
• ( TIGR00137 ) tRNA:m(5)U-54 methyltransferase
• ( TIGR02731 ) phytoene desaturase
• ( TIGR02732 ) carotene 7,8-desaturase
• ( TIGR02734 ) phytoene desaturase

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

No results were calculated for this gene in GeneMania.

Tetrahymena Stock Center

• ( SD01740 ) Micronucleus: PAR1 gene partially replaced by neo4-KanR2 cassette. Macronucleus: LSD2 gene partially replaced by neo4-KanR2 cassette.

Homologs

Source	Identifier	Score
Stentor Coeruleus	SteCoe_4768	0
	Description: None
Tetrahymena borealis	EI9_14924.1	9.997093137033517e-262
	Description: amine oxidase, flavin-containing family protein (455 aa)
WormBase	WBGene00001568	9.997093137033517e-262
	Description: locus:snpc-4 status:Partially_confirmed UniProt:O62208 protein_id:CAB04248.1
DictyBase	DDB_G0289265	2.0008113830639685e-30
	Description: DDB_G0289265 on chromosome: 5 position 2564981 to 2566834
WormBase	WBGene00000137	1.000116773704384e-19
	Description: locus:amx-1 Amine oxidase family member 1 status:Partially_confirmed UniProt:Q21988 protein_id:CAA84671.3
WormBase	WBGene00003572	1.000116773704384e-19
	Description: locus:ncx-7 Putative sodium/calcium exchanger 7 status:Partially_confirmed UniProt:P34322 protein_id:CAA82341.3
SGD	YMR020W	0.0000000039998859049333245
	Description: FMS1 Polyamine oxidase, converts spermine to spermidine, which is required for the essential hypusination modification of translation factor eIF-5A; also involved in pantothenic acid biosynthesis
Oxytricha	Contig18181.0.g40	0.000000004999139696582238
	Description: Flavin containing amine oxidoreductase

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>TTHERM_00600670(coding)
ATGAGTACCAAACGGAAATCTGTTTTAATTATTGGTGCTGGTATATCTGGTTTAGCTGCT
GCTCATTCTTTGCATGAGAATGGATTTGATGTTCAAATTTTTGAAGCTCGAAAGGAGTTT
GGAGGAAGAATACGTAAGGATGATTCATTTGCTGGGTTCACCCTCGAGGTAGGCGGCGAG
GAAATCCACAAAGTGAACAGTCCTTATTACCATCTAGCCCTGAAAATGGGAGCTGATCTT
AAACCTGATGACACACTCAATCATTACTTTGAAGACATTGAAAAAGAAGAACTCATTGAT
AGAGAAGAATTTTTAAACAAGTACAATGACTAATACTTCTACAATGAAGTTGTTTAAAAT
AGAGACATCTAAGACGACTCTCAGTCACTCTAAAATTTCTTTACCAAAAAGGGACTAAAA
TCTCAATTTTACCAGTGGTACGAAGCTTTCTGGGGTATTGAAAACGGAGGTTCTCTGAAT
GAAATTTCTGTAAAAGCATACGGAGATTACGAAAGTGGTAGAAAGAGTGATCATGACTTA
AATTTCATATTGATGAACACTTCTCACTATGAGATCATTGAAAAAGCTTTTGAATCTGTA
TTACCTTTCATTCATTACTCTACTCCTATCACTGAAATCAACTACTTTGGTGAAAAAGAA
CACCCATTATAAAGAGACGAAGATGATGAAGATGAAGATAATGACGAAGATGACTGTAAA
GGAAAGGATTTCAATAGAGTTATCATTTTCGATAAGTAGGGAAATAGATACGAAGGAGAC
TATATCATTGTCACAGTTCCTATTTCTTAGTTGTAAAATAAAACAATTCGCTTTAATCCA
GAATTACCACCTTAAAAGTAAGATGCTATTCGTCGTATGAAGCTCGGAAGAGGAGGTAAA
ATCCATTTCAAATTTAAGAATAGATTCTGGCCTGATAATGCAAGGACAATCTTTTTAAGA
TCTAAAATCAGTTTCTTGTGGAATCAATACCACGAATAGAAAGATACTGATGAAATTCAA
ACTAATGTCTTGGCTGGTCTTTTAGCTGGTGATATTATGGATGAAATGCAAGATCCTGAA
AAAAGGTAGGCTCTTATTGATGAAGTTTTAGAAAAAATGACTCGTGTCTTCAAATACCCA
AATGCAAAGGAAGAATTATTAGATGTTATGTGGAATGATTTTACTAATTTTGAATACATC
TAAGGTAACTACTCAATGCCAACTTTAAATATTGGTAGCTCTCGCTATATTTATTAATAG
CCAGTTGATAACATACTATTCTTTGCTGGAGAAGCTTCTCATACTACCGATTCGATGACA
ATTCATGGTGCTTATGAGACAGGTTTGCGTGACGCATAGCGCATCATCGATCTTCAGAAG
GAAAAGAAGTGA

>TTHERM_00600670(gene)
ATGAGTACCAAACGGAAATCTGTTTTAATTATTGGTGCTGGTATATCTGGTTTAGCTGCT
GCTCATTCTTTGCATGAGAATGGATTTGATGTTCAAATTTTTGAAGCTCGAAAGGAGTTT
GGAGGAAGAATACGTAAGGATGATTCATTTGCTGGGTTCACCCTCGAGGTAGGCGGCGAG
GAAATCCACAAAGTGAACAGTCCTTATTACCATCTAGCCCTGAAAATGGGAGCTGATCTT
AAACCTGATGACACACTCAATCATTACTTTGAAGACATTGAAAAAGAAGAACTCATTGAT
AGAGAAGAATTTTTAAACAAGTACAATGACTAATACTTCTACAATGAAGTTGTTTAAAAT
AGAGACATCTAAGACGACTCTCAGTCACTCTAAAATTTCTTTACCAAAAAGGGACTAAAA
TCTCAATTTTACCAGTGGTACGAAGCTTTCTGGGGTATTGAAAACGGAGGTTCTCTGAAT
GAAATTTCTGTAAAAGCATACGGAGATTACGAAAGTGGTAGAAAGAGTGATCATGACTTA
AATTTCATATTGATGAACACTTCTCACTATGAGATCATTGAAAAAGCTTTTGAATCTGTA
TTACCTTTCATTCATTACTCTACTCCTATCACTGAAATCAACTACTTTGGTGAAAAAGAA
CACCCATTATAAAGAGACGAAGATGATGAAGATGAAGATAATGACGAAGATGACTGTAAA
GGAAAGGATTTCAATAGAGTTATCATTTTCGATAAGTAGGGAAATAGATACGAAGGAGAC
TATATCATTGTCACAGTTCCTATTTCTTAGTTGTAAAATAAAACAATTCGCTTTAATCCA
GAATTACCACCTTAAAAGTAAGATGCTATTCGTCGTATGAAGCTCGGAAGAGGAGGTAAA
ATCCATTTCAAATTTAAGAATAGATTCTGGCCTGATAATGCAAGGACAATCTTTTTAAGA
TCTAAAATCAGTTTCTTGTGGAATCAATACCACGAATAGAAAGATACTGATGAAATTCAA
ACTAATGTCTTGGCTGGTCTTTTAGCTGGTGATATTATGGATGAAATGCAAGATCCTGAA
AAAAGGTAGGCTCTTATTGATGAAGTTTTAGAAAAAATGACTCGTGTCTTCAAATACCCA
AATGCAAAGGAAGAATTATTAGATGTTATGTGGAATGATTTTACTAATTTTGAATACATC
TAAGGTAACTACTCAATGCCAACTTTAAATATTGGTAGCTCTCGCTATATTTATTAATAG
CCAGTTGATAACATACTATTCTTTGCTGGAGAAGCTTCTCATACTACCGATTCGATGACA
ATTCATGGTGCTTATGAGACAGGTTTGCGTGACGCATAGCGCATCATCGATCTTCAGAAG
GAAAAGAAGTGA

>TTHERM_00600670(protein)
MSTKRKSVLIIGAGISGLAAAHSLHENGFDVQIFEARKEFGGRIRKDDSFAGFTLEVGGE
EIHKVNSPYYHLALKMGADLKPDDTLNHYFEDIEKEELIDREEFLNKYNDQYFYNEVVQN
RDIQDDSQSLQNFFTKKGLKSQFYQWYEAFWGIENGGSLNEISVKAYGDYESGRKSDHDL
NFILMNTSHYEIIEKAFESVLPFIHYSTPITEINYFGEKEHPLQRDEDDEDEDNDEDDCK
GKDFNRVIIFDKQGNRYEGDYIIVTVPISQLQNKTIRFNPELPPQKQDAIRRMKLGRGGK
IHFKFKNRFWPDNARTIFLRSKISFLWNQYHEQKDTDEIQTNVLAGLLAGDIMDEMQDPE
KRQALIDEVLEKMTRVFKYPNAKEELLDVMWNDFTNFEYIQGNYSMPTLNIGSSRYIYQQ
PVDNILFFAGEASHTTDSMTIHGAYETGLRDAQRIIDLQKEKK