Identifiers and Description

Gene Model Identifier

TTHERM_00630430

Standard Name

RRP62 (exosome component RRP6-2)

Aliases

PreTt06556 | 89.m00150 | 3831.m01451

Description

RRP62 3-prime-5-prime exonuclease

Genome Browser (Macronucleus)

Full Screen View

No Genome Browser Data Present

Genome Browser (Micronucleus)

Full Screen View

No Genome Browser Data Present

Gene Ontology Annotations

Molecular Function

• rhamnulokinase activity (IEA) | GO:0008993

Biological Process

• detection of virus (IEA) | GO:0009597
• protein import into peroxisome matrix, receptor recycling (IEA) | GO:0016562
• protein phosphorylation (IEA) | GO:0006468

Domains

No Data fetched for Domains

Gene Expression Profile

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source	Identifier	Score
Tetrahymena borealis	EI9_04330.1	9.997093137033517e-262
	Description: 3-5 exonuclease (729 aa)
Oxytricha	Contig8740.0.1.g10	1.9998745702418095e-48
	Description: 3-5 exonuclease
Stentor Coeruleus	SteCoe_7112	8.985825944049381e-37
	Description: None
DictyBase	DDB_G0278593	3.000842737734004e-34
	Description: exdl2B on chromosome: 3 position 240471 to 242531
SGD	YOR001W	4.998021988471165e-24
	Description: RRP6 Nuclear exosome exonuclease component; has 3-5 exonuclease activity; involved in RNA processing, maturation, surveillance, degradation, tethering, and export; has similarity to E. coli RNase D and to human PM-Sc1 100 (EXOSC10); mutant displays reduced transcription elongation in the G-less-based run-on (GLRO) assay
WormBase	WBGene00000796	8.000124778438792e-23
	Description: locus:crn-3 status:Confirmed UniProt:G5EBX6 protein_id:CAA90108.1

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>TTHERM_00630430(coding)
ATGAAAAATTACACAATTAAAGAGTTTTAACAATATAATCACAGTGTATTAAATCCCTTT
TAGCCTGAAAAGTATATTTTGATAGATACTTTAAATAAGCTGCAGGATTTAATTCCAATA
CTTTTAGAATAAACTAGGTTAGGAATAGATACAGAATAGAGCTTTGCCAAGACCTATGAA
GGATTTTTATGCTTGATACAAATTTCAACTGATTAAAATGACTATCTGATAGATGTTTTA
GGCATCAACAGCAAATAAGGAATTAATGAGTGTCTTTCTAAAGTTTTTTTGTGCAAAGAC
ATTATTAAAATTTTTTATGCTGGATAATAAGATATTTTATGGCTTAAGAGAGATTTTGAT
TTATCAGTAGTAAATTACTTCGATGTAAAAGAATGTGCAAGCTTCCTAAAAAAATCTGAT
GATAATTCACTTATTTAGCTGATTGATCGCTATTGCAATTACAAATTAGATAAGCAAAAG
AAAAAAGAGCTATAAGTTTCAGAGTGGTCAAATAGACCTTTAAGCAAAGAATAGTTAGAC
TATGCTGCTTTGGATTCTCATTACTTAATAAAAATTAGATATGAACTGTTGTGTGAGACT
ATATAAAGTGTCGGTTTTAAGAGAACTATTGAAGTCATTAACTAAATGCAGTAATAAACT
TTAAAGAAATATGAAAAGAAGAAGTTTGATTATTAGTACTTTTTTGATTTATTTTAGAAA
TAATTTAAGCATTAAGAGTTATATGCATCATAAATTGACAAGTAATCAGAAGTATACAGA
ATAATAAACGTAATATATTGTAGAATAGCCAAACTTAAAAATGAATATTCATAATTAAAT
AACTTAAATGCTAATAATTTGTTATTGGAACCTTCGCTTTTAGAACTAGCTTTTAAAATT
TATGATTTAAACAGTAATAAACTTGCTTTGTTGGAAGATTTAGACTTATAAACATTCTAA
AATATCAAATATCCCCAATCGCTTATATTTTTGTAAAGCTAAAGGGAGAAAATCATGTTA
ATTTTGAATTCATGGAATTAGAGTGAAGAAAAAAACAATTTATTATAAGAGTATGATAAA
TATGGATAAAAAAAGGCTAGCAGTCACACTGAAAAAGAAGAAAGGAAGCAGAAGAGAGCA
TAATAATTTGAGGAGTAGTTCTGCTTGAAAAAAGAACCATACGGAAATTGCTAAATTCTA
TCACCACTAGGTTTGAAACTTTGCAATTGTGATGAAAAAAAAGTTAAATGGTATCTCAAT
AAAGGACTAGCTACTTTAGTCAGTAGAGAGCCTTACACAATTATAAAATTAAATTTTTAG
CCTAATGGAAAGAATCATGAAGAATTAGAACAAGAAATTCATTTGAATGAAAACCAATTT
TATGCAAGCAAGAGAGAAACTGTTTGTGTAGTCTGTGGAAAAGATGAAAAATTCACTAAA
TATCATGTTATTCCCTCTATATACAGAACTCATTTTCCAAATAAATACAAAAGCCATAGA
TCTCATGACATTTTGTTATTATGTGTGAAATGTCACCAGAAAGCAGGAAAAAACGCAGAT
TTGTTAAAAGATTAACTATTGCAGTAATATAAAATAGAAAAACAGCAGTATTTTAAATAG
CAAAGCTTAAAATATATGGCTTAAAGAATGTATGCTAGTACTAAGTCATACTTAAAAAGC
AAAGAAAAAATGAATAAAGAAAATAGATAAAAGTGTAAAGAAAACATTAGACAATATTTC
GACGAATTGCTCAAAACACCTGATATTTAAAATAAGTTTCCTTAGTTAAAGGACAAACAA
TTTAAAGTCTCAACCACTGGAAAAATTAAAATTGATGAAGAATTTAGGAGTTTCTTTTCT
AATTTAGAAAAAGACTCTAAAAATATTAAAGATGAAGAAAAACAAAATGAGAGAATTTGG
GCTGGATAAAAAGTAGTTGAAAATTTGAAAACAGAAGATGACATTATTTTATTCATAAAA
ATGTGGAGACAGCACTTTTTAGATGTTATGCAACCAAAATATTTACCATTTGGATGGAAT
GTCAATCATAAATTTACAAGAGATTTTGGTAAAGAGTCTGTTTTCAATTAAATTGAAGGT
AATCAAACAGAAGATATCTCCTAACAAAGCCATATAACTGTTTCTGAAGGAATAAATTAG
CAACCATGA

>TTHERM_00630430(gene)
ATGAAAAATTACACAATTAAAGAGTTTTAACAATATAATCACAGTGTATTAAATCCCTTT
TAGCCTGAAAAGTATATTTTGATAGATACTTTAAATAAGCTGCAGGATTTAATTCCAATA
CTTTTAGAATAAACTAGGTTAGGTAACTTTTCAAATTTATTTATTTTTACATTGTTTATG
TAAATTATTTATAATATACAGGAATAGATACAGAATAGAGCTTTGCCAAGACCTATGAAG
GATTTTTATGCTTGATACAAATTTCAACTGATTAAAATGACTATCTGATAGATGTTTTAG
GCATCAACAGCAAATAAGGAATTAATGAGTGTCTTTCTAAAGTTTTTTTGTGCAAAGACA
TTATTAAAATTTTTTATGCTGGATAATAAGATATTTTATGGCTTAAGAGAGATTTTGATT
TATCAGTAGTAAATTACTTCGATGTAAAAGAATGTGCAAGCTTCCTAAAAAAATCTGATG
ATAATTCACTTATTTAGCTGATTGATCGCTATTGCAATTACAAATTAGATAAGCAAAAGA
AAAAAGAGCTATAAGTAAATAAATCAGTATTTATTTATATATATTTTTATTTTATTTATT
TTCCAAAAGGTTTCAGAGTGGTCAAATAGACCTTTAAGCAAAGAATAGTTAGACTATGCT
GCTTTGGATTCTCATTACTTAATAAAAATTAGATATGAACTGTTGTGTGAGACTATATAA
AGTGTCGGTTTTAAGAGAACTATTGAAGTCATTAACTAAATGCAGTAATAAACTTTAAAG
AAATATGAAAAGAAGAAGTTTGATTATTAGTACTTTTTTGATTTATTTTAGAAATAATTT
AAGCATTAAGAGTTATATGCATCATAAATTGACAAGTAATCAGAAGTATACAGAATAATA
AACGTAATATATTGTAGAATAGCCAAACTTAAAAATGAATATTCATAATTAAATAACTTA
AATGCTAATAATTTGTTATTGGAACCTTCGCTTTTAGAACTAGCTTTTAAAATTTATGAT
TTAAACAGTAATAAACTTGCTTTGTTGGAAGATTTAGACTTATAAACATTCTAAAATATC
AAATATCCCCAATCGCTTATATTTTTGTAAAGCTAAAGGGAGAAAATCATGTTAATTTTG
AATTCATGGAATTAGAGTGAAGAAAAAAACAATTTATTATAAGAGTATGATAAATATGGA
TAAAAAAAGGCTAGCAGTCACACTGAAAAAGAAGAAAGGAAGCAGAAGAGAGCATAATAA
TTTGAGGAGTAGTTCTGCTTGAAAAAAGAACCATACGGAAATTGCTAAATTCTATCACCA
CTAGGTTTGAAACTTTGCAATTGTGATGAAAAAAAAGTTAAATGGTATCTCAATAAAGGA
CTAGCTACTTTAGTCAGTAGAGAGCCTTACACAATTATAAAATTAAATTTTTAGCCTAAT
GGAAAGAATCATGAAGAATTAGAACAAGAAATTCATTTGAATGAAAACCAATTTTATGCA
AGCAAGAGAGAAACTGTTTGTGTAGTCTGTGGAAAAGATGAAAAATTCACTAAATATCAT
GTTATTCCCTCTATATACAGAACTCATTTTCCAAATAAGTAAATTTCATTTCCTTTCTCA
TAAAATATAAAATAGTTCGATGCATTAAAATAAAATTAAATAGATACAAAAGCCATAGAT
CTCATGACATTTTGTTATTATGTGTGAAATGTCACCAGAAAGCAGGAAAAAACGCAGATT
TGTTAAAAGATTAACTATTGCAGTAATATAAAATAGAAAAACAGCAGTATTTTAAATAGC
AAAGCTTAAAATATATGGCTTAAAGAATGTATGCTAGTACTAAGTCATACTTAAAAAGCA
AAGAAAAAATGAATAAAGAAAATAGATAAAAGTGTAAAGAAAACATTAGACAATATTTCG
ACGAATTGCTCAAAACACCTGATATTTAAAATAAGTTTCCTTAGTTAAAGGACAAACAAT
TTAAAGTCTCAACCACTGGAAAAATTAAAATTGATGAAGAATTTAGGAGTTTCTTTTCTA
ATTTAGAAAAAGACTCTAAAAATATTAAAGATGAAGAAAAACAAAATGAGAGAATTTGGG
CTGGATAAAAAGTAGTTGAAAATTTGAAAACAGAAGATGACATTATTTTATTCATAAAAA
TGTGGAGACAGCACTTTTTAGATGTTATGCAACCAAAATATTTACCATTTGGATGGAATG
TCAATCATAAATTTACAAGAGATTTTGGTAAAGAGTCTGTTTTCAATTAAATTGAAGGTA
ATCAAACAGAAGATATCTCCTAACAAAGCCATATAACTGTTTCTGAAGGAATAAATTAGC
AACCATGA

>TTHERM_00630430(protein)
MKNYTIKEFQQYNHSVLNPFQPEKYILIDTLNKLQDLIPILLEQTRLGIDTEQSFAKTYE
GFLCLIQISTDQNDYLIDVLGINSKQGINECLSKVFLCKDIIKIFYAGQQDILWLKRDFD
LSVVNYFDVKECASFLKKSDDNSLIQLIDRYCNYKLDKQKKKELQVSEWSNRPLSKEQLD
YAALDSHYLIKIRYELLCETIQSVGFKRTIEVINQMQQQTLKKYEKKKFDYQYFFDLFQK
QFKHQELYASQIDKQSEVYRIINVIYCRIAKLKNEYSQLNNLNANNLLLEPSLLELAFKI
YDLNSNKLALLEDLDLQTFQNIKYPQSLIFLQSQREKIMLILNSWNQSEEKNNLLQEYDK
YGQKKASSHTEKEERKQKRAQQFEEQFCLKKEPYGNCQILSPLGLKLCNCDEKKVKWYLN
KGLATLVSREPYTIIKLNFQPNGKNHEELEQEIHLNENQFYASKRETVCVVCGKDEKFTK
YHVIPSIYRTHFPNKYKSHRSHDILLLCVKCHQKAGKNADLLKDQLLQQYKIEKQQYFKQ
QSLKYMAQRMYASTKSYLKSKEKMNKENRQKCKENIRQYFDELLKTPDIQNKFPQLKDKQ
FKVSTTGKIKIDEEFRSFFSNLEKDSKNIKDEEKQNERIWAGQKVVENLKTEDDIILFIK
MWRQHFLDVMQPKYLPFGWNVNHKFTRDFGKESVFNQIEGNQTEDISQQSHITVSEGINQ
QP