Identifiers and Description

Gene Model Identifier

TTHERM_00630440

Standard Name

RRP63 (exosome component RRP6-3)

Aliases

PreTt06557 | 89.m00151 | 3831.m01452

Description

RRP63 3-prime-5-prime exonuclease

Genome Browser (Macronucleus)

Full Screen View

No Genome Browser Data Present

Genome Browser (Micronucleus)

Full Screen View

No Genome Browser Data Present

External Links

• Uniprot
• Alphafold

Gene Ontology Annotations

Cellular Component

• intracellular anatomical structure (IEA) | GO:0005622

Molecular Function

• 3'-5' exonuclease activity (IEA) | GO:0008408
• nucleic acid binding (IEA) | GO:0003676

Biological Process

• nucleobase-containing compound metabolic process (IEA) | GO:0006139

Domains

No Data fetched for Domains

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

No results were calculated for this gene in GeneMania.

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source	Identifier	Score
Tetrahymena borealis	EI9_04332.1	9.997093137033517e-262
	Description: 3-5 exonuclease (506 aa)
Oxytricha	Contig8740.0.1.g10	3.00017180903994e-49
	Description: 3-5 exonuclease
Stentor Coeruleus	SteCoe_7112	2.031092662734811e-42
	Description: None
DictyBase	DDB_G0278079	2.0003218023735366e-33
	Description: exdl2A on chromosome: 3 position 242964 to 245120
SGD	YOR001W	2.000470901975128e-28
	Description: RRP6 Nuclear exosome exonuclease component; has 3-5 exonuclease activity; involved in RNA processing, maturation, surveillance, degradation, tethering, and export; has similarity to E. coli RNase D and to human PM-Sc1 100 (EXOSC10); mutant displays reduced transcription elongation in the G-less-based run-on (GLRO) assay
WormBase	WBGene00000796	4.9988726541653934e-26
	Description: locus:crn-3 status:Confirmed UniProt:G5EBX6 protein_id:CAA90108.1

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>TTHERM_00630440(coding)
ATGAGTGTTAAAAATAAGTATAATATATAAGACTTCGTAAATTCAAACTATTGTGAAACT
AAACCATTTTATAATGGTTAATATATTTTAGTTTAAACAAAAGAGCAACTCCGCGAATGC
ATTTAAGAGATCAAACAGTTTAACAAAATAGGAGTTGATACAGAATAGAGCTTCATGCAG
ACTTATTAGGCCTTTCTTTGTTTAATTTAAATATCTACTGAAGAGAAAGATTATCTGATT
GATTTACTCTCAATAAATGACAAATAATATATTAAGTCAGAGATTGAGTAAATATTCCTG
GATAAAAATATAATTAAAATTTTTTATGCAGGATAAACTGATATCGTATGGCTATAAAGA
GACTATGATATTTTAATATCTAACTATTTTGATATTTAAACTGCTGCAATATTTTTAAAT
AAGGATGAAAGCTGGTCTTTAACTTATCTTCTTTAAAAATACTGCGACTATACTCTTGAA
AAGAAAGAGAAGAAATAACTTTAACTTTCAGAATGGTCTGATCGCCCACTAAGTGAAGAA
TAATTAAATTATGCAGCTCTCGACTCTCATTTCTTAATAAAAATAAGATACGAGCTACTT
CACGAAATGATCAAAAGACTGGATTTCTAAAGAACACTAGAACTTCTTTACAAAATGCAG
AAAGCTACATCTAAAAAATATGAGAAAAAGCCATTTGATGAGTTATTTTACTTCTAAGCT
TTCGAAAAGTAATCTAAAATTTAGGTTAATAGTATTGGAGCTGGGCTTAAGAGTACAACA
GAATGGAAAATTCTTAATATAATTTTCTTAGAACTTGCAGAATTGAGAGAGAGTTACTCT
GAATAGTAAAATAGATATATTCAAAGTGTTTTAACAGAAGAATCATTGCTGCAAATAGCT
TATTCTACCTTTGATGAAATATAATATAAATTAAAAAGTGTATACGAAATTCAAAACTAA
GACTAATTTACTGAAAAGCATTCTTAAGATTTCTTGAATTCAAATAAGGAGAAAATAATT
TCAATTCTAAATAGACACACAATTGAATTAGATAAAATTATTGAGAAATACGAATTGCTA
TGCATACCAATTAAAAATAAAATGCATATCCTTCAGCAAAGAATTGAGAGGAAAAATAAG
ACATTCTAAGAAAAATACTCGATGAAGACTGTACCTTACGAAAACTGCTAAATACTTTCA
CCAGATGGACAGCAATTATGTAACTGTAACAGTAAAAAAATTTAATGGTATCTTAAGAAA
GGGTTAGCTCATCTTGTAAGCGAAAATCCTACAGTTATCAAACTTAACTTCTAGCCAAGT
GGAAAGGGAAATTTTGATTTGGAGGATTAGAAGATCTTTGAAAACAATTACTATTATGTA
ACAGAAAGAGAAAACAAATGTGTTGTCTGTGGTTCTACAGAAAAATTTGCTAAATTTTAC
GTTATTCCATCTCTCTATAGGCGTCATTTTCCAGATATTTTGAAGAGTCATAGATCTTAG
GATATACTGCTTTTGTGTATGAATTGCCATCAAAGAGCAGGAACTTACTGTGATAAAAAG
ATTGACGAAATTTGTTAGTAATATCAAGTTGATAAAATTAGTTTGTAGTATGCTTCAGTG
GTGTAAGACGTTATCTAAAGATTGAGCAGGAGTGCTAGGTCTTTCCAGAAAAATAAGTCT
CATATGCCCAAAGAGAATAAGAAGAAACTAAAATCAATAATTAGATAGAACTATTAGGAT
TTTATAGAGTTAAAGGATATTCAATAAAAGATAGATATTCACCCTGATTCTTATTTTGGA
ATTAACAAGTAAAATTAAATTAAGATTAATGATAAGTTTATATCATATTGCTTGGAAATT
GATAACTTTAAAAAAATTGGTAAAGAGAATTCATGTAATGATTTTAAGAATTAGCATGGT
AAATATGTAGTAGAATAACTTAAAAACTTAAAAGATCTTACTGAATTTGTTCTTATGTGG
CGTTAGTATTTCATTAAAACAATGTAGCCTAAATATTTACCAAGAGATTGGACAGAAAAG
CCTAAAAGAGTAGAACCAGATAACGAAAGTAAATATGATAAAAAGCTTGAATAGATTCAA
ATATTTTCAAACTAATGA

>TTHERM_00630440(gene)
ATGAGTGTTAAAAATAAGTATAATATATAAGACTTCGTAAATTCAAACTATTGTGAAACT
AAACCATTTTATAATGGTTAATATATTTTAGTTTAAACAAAAGAGCAACTCCGCGAATGC
ATTTAAGAGATCAAACAGTTTAACAAAATAGGTATTATTTAAAAATTTTTTTTACCAATC
ATTCAATAAATCATTAAAAATATTTATATATTTATTTATTTATTAATTATAAAAGGAGTT
GATACAGAATAGAGCTTCATGCAGACTTATTAGGCCTTTCTTTGTTTAATTTAAATATCT
ACTGAAGAGAAAGATTATCTGATTGATTTACTCTCAATAAATGACAAATAATATATTAAG
TCAGAGATTGAGTAAATATTCCTGGATAAAAATATAATTAAAATTTTTTATGCAGGATAA
ACTGATATCGTATGGCTATAAAGAGACTATGATATTTTAATATCTAACTATTTTGATATT
TAAACTGCTGCAATATTTTTAAATAAGGATGAAAGCTGGTCTTTAACTTATCTTCTTTAA
AAATACTGCGACTATACTCTTGAAAAGAAAGAGAAGAAATAACTTTAAGTAGAATTTCTT
TATTTGTTTATTTGTTTTATTAACTTCTATTTTTAATTGTTGATAAAAATTAGCTTTCAG
AATGGTCTGATCGCCCACTAAGTGAAGAATAATTAAATTATGCAGCTCTCGACTCTCATT
TCTTAATAAAAATAAGATACGAGCTACTTCACGAAATGATCAAAAGACTGGATTTCTAAA
GAACACTAGAACTTCTTTACAAAATGCAGAAAGCTACATCTAAAAAATATGAGAAAAAGC
CATTTGATGAGTTATTTTACTTCTAAGCTTTCGAAAAGTAATCTAAAATTTAGGTTAATA
GTATTGGAGCTGGGCTTAAGAGTACAACAGAATGGAAAATTCTTAATATAATTTTCTTAG
AACTTGCAGAATTGAGAGAGAGTTACTCTGAATAGTAAAATAGATATATTCAAAGTGTTT
TAACAGAAGAATCATTGCTGCAAATAGCTTATTCTACCTTTGATGAAATATAATATAAAT
TAAAAAGTGTATACGAAATTCAAAACTAAGACTAATTTACTGAAAAGCATTCTTAAGATT
TCTTGAATTCAAATAAGGAGAAAATAATTTCAATTCTAAATAGACACACAATTGAATTAG
ATAAAATTATTGAGAAATACGAATTGCTATGCATACCAATTAAAAATAAAATGCATATCC
TTCAGCAAAGAATTGAGAGGAAAAATAAGACATTCTAAGAAAAATACTCGATGAAGACTG
TACCTTACGAAAACTGCTAAATACTTTCACCAGATGGACAGCAATTATGTAACTGTAACA
GTAAAAAAATTTAATGGTATCTTAAGAAAGGGTTAGCTCATCTTGTAAGCGAAAATCCTA
CAGTTATCAAACTTAACTTCTAGCCAAGTGGAAAGGGAAATTTTGATTTGGAGGATTAGA
AGATCTTTGAAAACAATTACTATTATGTAACAGAAAGAGAAAACAAATGTGTTGTCTGTG
GTTCTACAGAAAAATTTGCTAAATTTTACGTTATTCCATCTCTCTATAGGCGTCATTTTC
CAGATATGTAACAAATCAATTTCACAAAAATTTTTGTTTCACCTTTAATAAATTATTTGC
AATGAGGTTTTATTTAATTAAAAATTATATTAATTAAATTTAGAAATACTGTAATTTTTA
TACACTTCCCTCCTCCATGAACCCTCCTAATTTTTTATCTATAAAGGCTAAACAAGCCAT
TAAATTTTAAAATTTAAAGAAAATGGAAGGGCTAAAACTAGAATAATTACAGTACTTAGA
ACTTTAAATTTTAATTGAAAATAAAAAAAATAATTGAAAGTATTCAATAGTTTAATGAAG
GACTATTCAAACATGAAATATATTTTACAAATCAAATAAAATTAAAATAAATTTTTGAAT
ATAAAAAAATTAGTTTGAAGAGTCATAGATCTTAGGATATACTGCTTTTGTGTATGAATT
GCCATCAAAGAGCAGGAACTTACTGTGATAAAAAGATTGACGAAATTTGTTAGTAATATC
AAGTTGATAAAATTAGTTTGTAGTATGCTTCAGTGGTGTAAGACGTTATCTAAAGATTGA
GCAGGAGTGCTAGGTCTTTCCAGAAAAATAAGTCTCATATGCCCAAAGAGAATAAGAAGA
AACTAAAATCAATAATTAGATAGAACTATTAGGATTTTATAGAGTTAAAGGATATTCAAT
AAAAGATAGATATTCACCCTGATTCTTATTTTGGAATTAACAAGTAAAATTAAATTAAGA
TTAATGATAAGTTTATATCATATTGCTTGGAAATTGATAACTTTAAAAAAATTGGTAAAG
AGAATTCATGTAATGATTTTAAGAATTAGCATGGTAAATATGTAGTAGAATAACTTAAAA
ACTTAAAAGATCTTACTGAATTTGTTCTTATGTGGCGTTAGTATTTCATTAAAACAATGT
AGCCTAAATATTTACCAAGAGATTGGACAGAAAAGCCTAAAAGAGTAGAACCAGATAACG
AAAGTAAATATGATAAAAAGCTTGAATAGATTCAAATATTTTCAAACTAATGA

>TTHERM_00630440(protein)
MSVKNKYNIQDFVNSNYCETKPFYNGQYILVQTKEQLRECIQEIKQFNKIGVDTEQSFMQ
TYQAFLCLIQISTEEKDYLIDLLSINDKQYIKSEIEQIFLDKNIIKIFYAGQTDIVWLQR
DYDILISNYFDIQTAAIFLNKDESWSLTYLLQKYCDYTLEKKEKKQLQLSEWSDRPLSEE
QLNYAALDSHFLIKIRYELLHEMIKRLDFQRTLELLYKMQKATSKKYEKKPFDELFYFQA
FEKQSKIQVNSIGAGLKSTTEWKILNIIFLELAELRESYSEQQNRYIQSVLTEESLLQIA
YSTFDEIQYKLKSVYEIQNQDQFTEKHSQDFLNSNKEKIISILNRHTIELDKIIEKYELL
CIPIKNKMHILQQRIERKNKTFQEKYSMKTVPYENCQILSPDGQQLCNCNSKKIQWYLKK
GLAHLVSENPTVIKLNFQPSGKGNFDLEDQKIFENNYYYVTERENKCVVCGSTEKFAKFY
VIPSLYRRHFPDILKSHRSQDILLLCMNCHQRAGTYCDKKIDEICQQYQVDKISLQYASV
VQDVIQRLSRSARSFQKNKSHMPKENKKKLKSIIRQNYQDFIELKDIQQKIDIHPDSYFG
INKQNQIKINDKFISYCLEIDNFKKIGKENSCNDFKNQHGKYVVEQLKNLKDLTEFVLMW
RQYFIKTMQPKYLPRDWTEKPKRVEPDNESKYDKKLEQIQIFSNQ