Identifiers and Description

Gene Model Identifier

TTHERM_00637170

Standard Name

PRP18 (Pre-mRNA-splicing factor PRP18)

Aliases

PreTt19720 | 91.m00135

Description

PRP18 PRP18 Pre-mRNA processing factor-like protein putative; Pre-mRNA-splicing factor

Genome Browser (Macronucleus)

Full Screen View

No Genome Browser Data Present

Genome Browser (Micronucleus)

Full Screen View

No Genome Browser Data Present

External Links

• Uniprot
• Alphafold

Gene Ontology Annotations

Cellular Component

• spliceosomal complex (IEA) | GO:0005681

Biological Process

• RNA splicing (IEA) | GO:0008380

Domains

• ( PF00123 ) Peptide hormone
• ( PF02840 ) Prp18 domain
• ( PF04081 ) DNA polymerase delta, subunit 4
• ( PF08799 ) pre-mRNA processing factor 4 (PRP4)

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

No results were calculated for this gene in GeneMania.

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source	Identifier	Score
Tetrahymena borealis	EI9_03535.1	9.997093137033517e-262
	Description: Prp18 domain-containing protein (375 aa)
DictyBase	DDB_G0274555	1.0000099287337047e-53
	Description: prp18 on chromosome: 2 position 4164827 to 4165996
Oxytricha	Contig7183.0.g74	1.9998745702418095e-48
	Description: Prp18 domain
WormBase	WBGene00009320	1.9994920269952867e-34
	Description: status:Confirmed UniProt:O45431 protein_id:CAB03039.2
SGD	YGR006W	0.0000000000000030004923591262316
	Description: PRP18 Splicing factor involved in the positioning of the 3 splice site during the second catalytic step of splicing, part of snRNP U5, interacts with Slu7p
Stentor Coeruleus	SteCoe_33148	0.000045399929762484854
	Description: None

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>TTHERM_00637170(coding)
ATGAATGAGGAAGACTTCAAAAAGAAATAAAGAGAGGAAGCTGATTATATTGATGAAGAA
AAAATTTAAAAACTTTTTGCAAGGTTAAACTAACCAGAATAAAATATTAGTACTGAAAAG
GTAACTAATAAAAAGCAGTAAGAATTAGAAATAGAAAAACTTAAGCAAGTGTCTAACGAT
ACTAAAAATGAAGATATTTTAATATGGAGTTAAAAAACACTTCGTGATTGGGAGTAGAAA
TTAGAATAGAGATTCACAACTGATGAATAGAAAAAATCTGTTTTAGCAAGAAAATTAATT
GGTAATTTCCGTCAAACATCAGAGTACTTGAAACCTTTGTTTAAGCTTTTAAAAGAAAAG
AAATGTAGTTAAGATATTCTAGATGGATTATACATAGTCGTAAATTATGCATTATAAAGG
GAGTATGTAAAAGCAAATGACAAATATTTAGCCTTAGCTATTGGTAATGCTGCTTGGCCT
ATGGGTGTCACAATGGTTGGTATCCACGAAAGAGCTGGTCGTTCCAAAATTTTTAGTTCT
TAAGTTGCACATATATTAAATGATGAAACAACCAGAAAGTATTTGTAATCAATGAAGAGA
CTTGTTACAGTTTAATAGCTTATGTATCCTTCTGAAGATAAAGCTAAGATGATAAATTAT
GACACAACAATGGAGGAGTTATTTTGA

>TTHERM_00637170(gene)
ATGAATGAGGAAGACTTCAAAAAGAAATAAAGAGAGGAAGCTGATTATATTGATGAAGAA
AAAATTTAAAAACTTTTTGCAAGGTTAAACTAACCAGAATAAAATATTAGTACTGAAAAG
GTAACTAATAAAAAGCAGTAAGAATTAGAAATAGAAAAACTTAAGCAAGTGTCTAACGAT
ACTAAAAATGAAGATATTTTAATATGGAGTTAAAAAACACTTCGTGATTGGGAGTAGAAA
TTAGAATAGAGATTCACAACTGATGAATAGAAAAAATCTGTTTTAGCAAGAAAATTAATT
GGTAATTTCCGTCAAACATCAGAGTACTTGAAACCTTTGTTTAAGCTTTTAAAAGAAAAG
AAATGTAGTTAAGATATTCTAGATGGATTATACATAGTCGTAAATTATGCATTATAAAGG
GAGTATGTAAAAGCAAATGACAAATATTTAGCCTTAGCTATTGGTAATGCTGCTTGGCCT
ATGGGTGTCACAATGGTTGGTATCCACGAAAGAGCTGGTCGTTCCAAAATTTTTAGTTCT
TAAGTTGCACGTAAAATTCTATTAAAATAAATTAAAATTTCTTTAAATGAAAATAATTAA
TAAAAAAGATATATTAAATGATGAAACAACCAGAAAGTATTTGTAATCAATGAAGAGACT
TGTTACAGTTTAATAGCTTATGTATCCTTCTGAAGATAAAGCTAAGATGATAAATTATGA
CAGTAAATATTTTTTTAATTTAAATAAAATAATATTAATCTATATTTTAAATAATTAGCA
ACAATGGAGGAGTTATTTTGA

>TTHERM_00637170(protein)
MNEEDFKKKQREEADYIDEEKIQKLFARLNQPEQNISTEKVTNKKQQELEIEKLKQVSND
TKNEDILIWSQKTLRDWEQKLEQRFTTDEQKKSVLARKLIGNFRQTSEYLKPLFKLLKEK
KCSQDILDGLYIVVNYALQREYVKANDKYLALAIGNAAWPMGVTMVGIHERAGRSKIFSS
QVAHILNDETTRKYLQSMKRLVTVQQLMYPSEDKAKMINYDTTMEELF