Identifiers and Description

Gene Model Identifier

TTHERM_00640040

Standard Name

PHR1 (PHotolyase Repair 1)

Aliases

PreTt10572 | 92.m00114

Description

PHR1 DNA photolyase FAD-binding domain protein; FAD binding domain of DNA photolyase family protein; utilizes visible light and long wavelength UV light to repair cyclobutane pyrimidine dimers

Genome Browser (Macronucleus)

Full Screen View

No Genome Browser Data Present

Genome Browser (Micronucleus)

Full Screen View

No Genome Browser Data Present

External Links

• Uniprot
• Alphafold

Gene Ontology Annotations

Molecular Function

• DNA photolyase activity (IEA) | GO:0003913

Biological Process

• DNA repair (IEA) | GO:0006281

Domains

• ( PF00875 ) DNA photolyase
• ( PF03441 ) FAD binding domain of DNA photolyase
• ( TIGR00591 ) deoxyribodipyrimidine photolyase
• ( TIGR02765 ) cryptochrome, DASH family
• ( TIGR02766 ) cryptochrome, plant family

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

No results were calculated for this gene in GeneMania.

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source	Identifier	Score
Tetrahymena borealis	EI9_01777.1	9.997093137033517e-262
	Description: FAD binding domain-DNA photolyase (489 aa)
SGD	YOR386W	9.999353957415832e-59
	Description: PHR1 DNA photolyase involved in photoreactivation, repairs pyrimidine dimers in the presence of visible light; induced by DNA damage; regulated by transcriptional repressor Rph1p
Oxytricha	Contig17048.0.g64	8.001655364039598e-37
	Description: FAD binding domain of DNA photolyase

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>TTHERM_00640040(coding)
ATGGATATATTAAATAGCAAATAATTTAGTGAAAATCAAAAGAAACAAAAAGTGAATTTG
TTTTGGTTTAGAAGAGATCTTAGATTATTTGACAACGTTGGGCTTTATCATGCTTTAAAG
GAATCTATACCTGTCGTACCTCTGTTTATATTTGACAAAGACATTTTAAATGAGCTCGAA
GATAAAAAGGATTGCAGAGTAGAATTCATTCATAATTATTTGAGTTAAATGTAAGATAAC
CTTAGAAAACATGGATCAACAATGGTTGTCAAACATTCTAATGCAGAAAGTGCTTTCAAG
AGTCTTATGGAGGAATTTGATATCTCTTGTGTATTCACAAACAGAGACTATGAACCATAC
GCAAAAAAGAGAGATTAATAGATTAAAGAGATACTAAACAGTAAAGGAATAGGATTCAAA
GATTTTAAGGACTAGGTTATTTTTGAAGCTAAAGAAGTACATCAAGACGATGGAAGTGCA
TTTAAGGTCTATACTCCTTTCAGTAAAAAATGGATCTCTTTACTTAGTGAACCTGATTAT
TAGAGTTACAAATCAGAGTCACTCATGAATAATTACTGGAAAAGCTAAGTAGAAGTTCCT
TTTCCTACTTTAGAATAGATAGGGTTTTAAAAAACAGGAATAGAGTTTCCACCAAGCTAG
TTAGATGAAGAATTGGTTAAAAATTATGATAAGACAAGAGATTACCCTCACATTAAAACA
TCTTTGATGAGTGTTCATTTGAGATTTGGCACTGTTTCTATCAGAGAGCTTGTTAGGAAA
GCCGTTCTCCTTAATTAGAAATATCTTGATGAGCTCTGCTGGAGAGAGTTCTTTATGATG
ATGATAGATTAGTTTCCTCTATTTGCTACAGAAAATTTCAAAAAGGCTTATAATAAAGTA
GAATGGAGAAACAACCCAGAGGAGTTTAAGGCATGGTGCGAAGGCAAAACTGGTTACCCT
TTATTAGATGCAGGAATGAGGTAACTAAATAAAACAGGTTACTTACCTAATAAGCTTAGA
ATGATTGCTGCAAGCTTCTTAACTAAAAATTTACTTATCGATTGGAGATGGGGCGAGAGG
TACTTTGCCTAAAAGTTAATAGATTACGACCTAGCAGCTAATGTAGGAGGATGGCAGTGG
GTAAATGGTTCAGGAACAGACTAAGCCCCATACATTAGAGTATTAGATCCTGTAATGCAA
CAAAAAAAGTATGATCCTGATTTCAAATACGTTAAAACTTGGGTTGAAGATTTTAATGAA
GATACCTACCCAAAAAGAATTGTTAACTATGAAGAGTCAAGACAAAGAGCCCTAGATGCT
TTCTCAATAGTTTTCAAAAAAAATTAAATTAAGCAGCATTAGCAATAAATAAAGGAAAAA
AAAGCAAATTATTAGCACTATTATAAAAATAAAAAATGA

>TTHERM_00640040(gene)
ATGGATATATTAAATAGCAAATAATTTAGTGAAAATCAAAAGAAACAAAAAGTGAATTTG
TTTTGGTTTAGAAGAGATCTTAGATTATTTGACAACGTTGGGCTTTATCATGCTTTAAAG
GAATCTATACCTGTCGTACCTCTGTTTATATTTGACAAAGACATTTTAAATGAGCTCGAA
GATAAAAAGGATTGCAGAGTAGAATTCATTCATAATTATTTGAGTTAAATGTAAGATAAC
CTTAGAAAACATGGATCAACAATGGTTGTCAAACATTCTAATGCAGAAAGTGCTTTCAAG
AGTCTTATGGAGGAATTTGATATCTCTTGTGTATTCACAAACAGAGACTATGAACCATAC
GCAAAAAAGAGAGATTAATAGATTAAAGAGATACTAAACAGTAAAGGAATAGGATTCAAA
GATTTTAAGGACTAGGTTATTTTTGAAGCTAAAGAAGTACATCAAGACGATGGAAGTGCA
TTTAAGGTCTATACTCCTTTCAGTAAAAAATGGATCTCTTTACTTAGTGAACCTGATTAT
TAGAGTTACAAATCAGAGTCACTCATGAATAATTACTGGAAAAGCTAAGTAGAAGTTCCT
TTTCCTACTTTAGAATAGATAGGGTTTTAAAAAACAGGAATAGAGTTTCCACCAAGCTAG
TTAGATGAAGAATTGGTTAAAAATTATGATAAGACAAGAGATTACCCTCACATTAAAACA
TCTTTGATGAGTGTTCATTTGAGATTTGGCACTGTTTCTATCAGAGAGCTTGTTAGGAAA
GCCGTTCTCCTTAATTAGAAATATCTTGATGAGCTCTGCTGGAGAGAGTTCTTTATGATG
ATGATAGATTAGTTTCCTCTATTTGCTACAGAAAATTTCAAAAAGGCTTATAATAAAGTA
GAATGGAGAAACAACCCAGAGGAGTTTAAGGCATGGTGCGAAGGCAAAACTGGTTACCCT
TTATTAGATGCAGGAATGAGGTAACTAAATAAAACAGGTTACTTACCTAATAAGCTTAGA
ATGATTGCTGCAAGCTTCTTAACTAAAAATTTACTTATCGATTGGAGATGGGGCGAGAGG
TACTTTGCCTAAAAGTTAATAGATTACGACCTAGCAGCTAATGTAGGAGGATGGCAGTGG
GTAAATGGTTCAGGAACAGACTAAGCCCCATACATTAGAGTATTAGATCCTGTAATGCAA
CAAAAAAAGTATGATCCTGATTTCAAATACGTTAAAACTTGGGTTGAAGATTTTAATGAA
GATACCTACCCAAAAAGAATTGTTAACTATGAAGAGTCAAGACAAAGAGCCCTAGATGCT
TTCTCAATAGTTTTCAAAAAAAATTAAATTAAGCAGCATTAGCAATAAATAAAGGAAAAA
AAAGCAAATTATTAGCACTATTATAAAAATAAAAAATGA

>TTHERM_00640040(protein)
MDILNSKQFSENQKKQKVNLFWFRRDLRLFDNVGLYHALKESIPVVPLFIFDKDILNELE
DKKDCRVEFIHNYLSQMQDNLRKHGSTMVVKHSNAESAFKSLMEEFDISCVFTNRDYEPY
AKKRDQQIKEILNSKGIGFKDFKDQVIFEAKEVHQDDGSAFKVYTPFSKKWISLLSEPDY
QSYKSESLMNNYWKSQVEVPFPTLEQIGFQKTGIEFPPSQLDEELVKNYDKTRDYPHIKT
SLMSVHLRFGTVSIRELVRKAVLLNQKYLDELCWREFFMMMIDQFPLFATENFKKAYNKV
EWRNNPEEFKAWCEGKTGYPLLDAGMRQLNKTGYLPNKLRMIAASFLTKNLLIDWRWGER
YFAQKLIDYDLAANVGGWQWVNGSGTDQAPYIRVLDPVMQQKKYDPDFKYVKTWVEDFNE
DTYPKRIVNYEESRQRALDAFSIVFKKNQIKQHQQQIKEKKANYQHYYKNKK