Identifiers and Description

Gene Model Identifier

TTHERM_00641210

Standard Name

IXR1 (Intrastrand crosslink recognition protein)

Aliases

PreTt10589 | 92.m00131

Description

IXR1 High mobility group (HMG) box protein; HMG box family protein; Homologue of Yeast IXR1 (Nabeel-Shah et al., 2020); hypothetical protein

Genome Browser (Macronucleus)

Full Screen View


Genome Browser (Micronucleus)

Full Screen View

External Links

Gene Ontology Annotations

No Data fetched for Gene Ontology Annotations

Domains

No Data fetched for Domains

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

No Data fetched for Homologs

General Information

No Data fetched for General Information

Associated Literature

  1. Ref:31932604: Nabeel-Shah S, Ashraf K, Saettone A, Garg J, Derynck J, Lambert JP, Pearlman RE, Fillingham J (2020) Nucleus-specific linker histones Hho1 and Mlh1 form distinct protein interactions during growth, starvation and development in Tetrahymena thermophila. Scientific reports 10(1):168

Sequences 

>TTHERM_00641210(coding)
ATGGCATTTAGTTCAAAGACTTCTTACTAAATTTATTACGAAGAGCAGTGTAAAATCTAC
AAGTAAAAAGGTATTACAGGAAATGAAGCTGCTAAGCTTATAGGAAAATAATGGAGCAGC
CTCTCTCCTTAGGAGAAAAAACCATATGATGATAAAAAGAAGGAGTATGAGTAATAAGTA
TTAAGAGAATAAAAAGTCATGAAGGACTTTTAAAAGAAGAGCTAACAAGATAATCAACAA
GCTAACAATAAATCTAATGCTACTTAGAAAAATGTAAATGATGAAAAACAAAACAGCTAA
TAAAAACAAGGAAATATTAAGAAATTTATGAAGGAAGATCTTCAAAAAGAAAAGTAAGAT
ATTCACAAAAAAGTTATTATCAAAAAGGTTGATAGCTCAGGAAAAGTATTATCATCCAAC
TCTTAGTAGCCCTAAACTTAAAGTCAGTAATCAGAAAAGTAAAAACCTTCGAATTAGCAG
CAAAAAAATACTCAAGCTAATAAAGCATCTGAGTAAAAGTAATAGAATAATAATAATAAT
AATCAAAACTCTCAAGAAAAGAAGGTCTAAAAACCAAAAGAGTAATAGCAATACTTTTAG
ATGAACAGTGAATAGGAAAATCTTAGAAAATCTAATCACTAAATTTATATTGATTTCTAC
AAAGAGAGACTTGCTTTTTACTAAAAACGCTTCCCATAGAGAACAGCAAAAGAATTAACT
CAAGTAGTTAAAGAAGAGTGGGACTGCGTTAAACTGCAAAGTAAAATTCAATAAAAAAAT
TAAAAAAAAGAAGTAAAATAAAACAAGGAAGTTTAAACAGTTTAAAAAGAAGGGAAAAAA
ATAGTTGAAATTGATGGTAAACAATTAGAAGTCCCTAAAAAACCTCTTTCAGGATATCTC
AGATACTATTAAGAAGTTTAGCATAAGCTTAAATTAAAAAATCCAGATTAAGCTTAAAAT
GAAATTGCTAAATTAGCTAGTGATTAATGGAAGGCTTTGTCAAAAGAATAATAAGAATAA
TACAATAGTTAATATCGTAAAGAATAATTGGAATATACTAATAAAATAAATGAAATCAAA
TAAAAATATAATATCGTACCTGTTGGAACAAGCTAAAAGAAAACTAAAAAGAACTCTAAA
AACTTTATTATCGTAGATAACTAAAAAGTTTTCTATCCTTTGAGACTTGGAGGCTATTTT
GTATATTAAAGAGTTGCCAGGGAACAATTAAGTAAATAAAATCATAATCGTGACTCGAGA
GAGATTTCTTCAATTATAGGATAAACATGGAAGTAGATGTCTGAGCTAGAAAAATAATAC
TATGAAAATTAAAGTGAAGTTGAATACTAGGAGCAAAAGAAAAACTTTATAGAAAAATAT
GGAGAGTTCCCTGAATAAGAAGTTAAAATAAAGCAAAAACCTAGTTAAAAAATTGAGTAA
AGCCAGTCTAAAAAGATTAATCAAAAAAGAAAAGCTCCTTCTTAAAAAGCAGAACCAGAA
ATTTCCAGTGAAGAAAAGGAAGAATAAATTAAGAAAAAGTATGAAAGAAAAATGAGAATA
AATTATGATGATGTTGAAAGTGAAATTGAAGATATTTACAGTGACATAGAAAAGGATTAA
AAGAAAAAATAAACTAGAGTTTAATACCAAGACGAAACAGATCAAGAAGAAGAAGAAGAT
GAAATTTAAGATCTTAGAAAATAGAATTTAAACAATAGAACATAGTAAAAAACAGGAAAA
GAAGAAAATTTTGATGAAATAGAAAAATAATCTACAAAAAATAAAAAAATTAAAACTGAA
AAAAGAAATTCTTCTGTGCCTAAACCAGGTTCTGCTTCTAAATAAACGAATCGTTTGTTT
GAAATGTTGAAGCAACCTATATAAGCACCAGAAGGTTTTGATTTTTAATTTGAATGA



>TTHERM_00641210(gene)
AAATAAGCTCAAATTAATAAAGAGTTTCTATAGTAATTTGAATAATTAATTCAAAAAGCA
AATTAAAAAATAGGAGAGATAGATAAATAGAAAAAATAGATTAGAGCAGTTGCAAACAAA
ATGGCATTTAGTTCAAAGACTTCTTACTAAATTTATTACGAAGAGCAGTGTAAAATCTAC
AAGTAAAAAGGTATTACAGGAAATGAAGCTGCTAAGCTTATAGGAAAATAATGGAGCAGC
CTCTCTCCTTAGGAGAAAAAACCATATGATGATAAAAAGAAGGAGTATGAGTAATAAGTA
TTAAGAGAATAAAAAGTCATGAAGGACTTTTAAAAGAAGAGCTAACAAGATAATCAACAA
GCTAACAATAAATCTAATGCTACTTAGAAAAATGTAAATGATGAAAAACAAAACAGCTAA
TAAAAACAAGGAAATATTAAGAAATTTATGAAGGAAGATCTTCAAAAAGAAAAGTAAGAT
ATTCACAAAAAAGTTATTATCAAAAAGGTTGATAGCTCAGGAAAAGTATTATCATCCAAC
TCTTAGTAGCCCTAAACTTAAAGTCAGTAATCAGAAAAGTAAAAACCTTCGAATTAGCAG
CAAAAAAATACTCAAGCTAATAAAGCATCTGAGTAAAAGTAATAGAATAATAATAATAAT
AATCAAAACTCTCAAGAAAAGAAGGTCTAAAAACCAAAAGAGTAATAGCAATACTTTTAG
ATGAACAGTGAATAGGAAAATCTTAGAAAATCTAATCACTAAATTTATATTGATTTCTAC
AAAGAGAGACTTGCTTTTTACTAAAAACGCTTCCCATAGAGAACAGCAAAAGAATTAACT
CAAGTAGTTAAAGAAGAGTGGGACTGCGTTAAACTGCAAAGTAAAATTCAATAAAAAAAT
TAAAAAAAAGAAGTAAAATAAAACAAGGAAGTTTAAACAGTTTAAAAAGAAGGGAAAAAA
ATAGTTGAAATTGATGGTAAACAATTAGAAGTCCCTAAAAAACCTCTTTCAGGATATCTC
AGATACTATTAAGAAGTTTAGCATAAGCTTAAATTAAAAAATCCAGATTAAGCTTAAAAT
GAAATTGCTAAATTAGCTAGTGATTAATGGAAGGCTTTGTCAAAAGAATAATAAGAATAA
TACAATAGTTAATATCGTAAAGAATAATTGGAATATACTAATAAAATAAATGAAATCAAA
TAAAAATATAATATCGTACCTGTTGGAACAAGCTAAAAGAAAACTAAAAAGAACTCTAAA
AACTTTATTATCGTAGATAACTAAAAAGTTTTCTATCCTTTGAGACTTGGAGGCTATTTT
GTATATTAAAGAGTTGCCAGGGAACAATTAAGTAAATAAAATCATAATCGTGACTCGAGA
GAGATTTCTTCAATTATAGGATAAACATGGAAGTAGATGTCTGAGCTAGAAAAATAATAC
TATGAAAATTAAAGTGAAGTTGAATACTAGGAGCAAAAGAAAAACTTTATAGAAAAATAT
GGAGAGTTCCCTGAATAAGAAGTTAAAATAAAGCAAAAACCTAGTTAAAAAATTGAGTAA
AGCCAGTCTAAAAAGATTAATCAAAAAAGAAAAGCTCCTTCTTAAAAAGCAGAACCAGAA
ATTTCCAGTGAAGAAAAGGAAGAATAAATTAAGAAAAAGTATGAAAGAAAAATGAGAATA
AATTATGATGATGTTGAAAGTGAAATTGAAGATATTTACAGTGACATAGAAAAGGATTAA
AAGAAAAAATAAACTAGAGTTTAATACCAAGACGAAACAGATCAAGAAGAAGAAGAAGAT
GAAATTTAAGATCTTAGAAAATAGAATTTAAACAATAGAACATAGTAAAAAACAGGAAAA
GAAGAAAATTTTGATGAAATAGAAAAATAATCTACAAAAAATAAAAAAATTAAAACTGAA
AAAAGAAATTCTTCTGTGCCTAAACCAGGTTCTGCTTCTAAATAAACGAATCGTTTGTTT
GAAATGTTGAAGCAACCTATATAAGCACCAGAAGGTTTTGATTTTTAATTTGAATGATTT
TAGCATAGGATTATTTGAATAATTTAATGTTATTTTGTTATTTAATTTTAAATTTAGATA
TATTAGAATTTATAGTTATTTATTTATTTGTCTTTTATATACAGTTTTATATAAAAATAA
ATATACCATACAATATCA



>TTHERM_00641210(protein)
MAFSSKTSYQIYYEEQCKIYKQKGITGNEAAKLIGKQWSSLSPQEKKPYDDKKKEYEQQV
LREQKVMKDFQKKSQQDNQQANNKSNATQKNVNDEKQNSQQKQGNIKKFMKEDLQKEKQD
IHKKVIIKKVDSSGKVLSSNSQQPQTQSQQSEKQKPSNQQQKNTQANKASEQKQQNNNNN
NQNSQEKKVQKPKEQQQYFQMNSEQENLRKSNHQIYIDFYKERLAFYQKRFPQRTAKELT
QVVKEEWDCVKLQSKIQQKNQKKEVKQNKEVQTVQKEGKKIVEIDGKQLEVPKKPLSGYL
RYYQEVQHKLKLKNPDQAQNEIAKLASDQWKALSKEQQEQYNSQYRKEQLEYTNKINEIK
QKYNIVPVGTSQKKTKKNSKNFIIVDNQKVFYPLRLGGYFVYQRVAREQLSKQNHNRDSR
EISSIIGQTWKQMSELEKQYYENQSEVEYQEQKKNFIEKYGEFPEQEVKIKQKPSQKIEQ
SQSKKINQKRKAPSQKAEPEISSEEKEEQIKKKYERKMRINYDDVESEIEDIYSDIEKDQ
KKKQTRVQYQDETDQEEEEDEIQDLRKQNLNNRTQQKTGKEENFDEIEKQSTKNKKIKTE
KRNSSVPKPGSASKQTNRLFEMLKQPIQAPEGFDFQFE