Identifiers and Description

Gene Model Identifier

TTHERM_00648910

Standard Name

IFT52 (IntraFlagellar Transport 52 homolog)

Aliases

PreTt09205 | 94.m00123 | 3677.m00031

Description

IFT52 intraflagellar transporter-like protein; Intraflagellar transport protein; essential for ciliary assembly, maintenance, and rotokinesis; Intraflagellar transport protein 52 homolog

Genome Browser (Macronucleus)

Full Screen View

No Genome Browser Data Present

Genome Browser (Micronucleus)

Full Screen View

No Genome Browser Data Present

External Links

• Uniprot
• Alphafold

Gene Ontology Annotations

Cellular Component

• cilium (IDA) | GO:0005929

Biological Process

• cilium assembly (IMP) | GO:0042384
• obsolete movement of cell or subcellular component (IMP) | GO:0006928
• septum digestion after cytokinesis (IMP) | GO:0000920

Domains

• ( PF09822 ) ABC-type uncharacterized transport system
• ( PF21178 ) Intraflagellar transport protein 52, C-terminal domain

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

No results were calculated for this gene in GeneMania.

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

No Data fetched for Homologs

General Information

No Data fetched for General Information

Associated Literature

1. Ref:12925756: Brown JM, Fine NA, Pandiyan G, Thazhath R, Gaertig J (2003) Hypoxia regulates assembly of cilia in suppressors of Tetrahymena lacking an intraflagellar transport subunit gene. Molecular biology of the cell 14(8):3192-207

Sequences

>TTHERM_00648910(coding)
ATGAGTGGAGAATAGAAAATTATTGTCTTCAACGCTTCAAAGAAGGAGGCTGGTAACCCT
AGTACAAATATTAAAAAGATTATCAAGAAATATAAAGAAACATATAAGTGCGGCAGAAAT
AAAGAAGATATCACATATGATAGACTAAAGATGGCTTCTTTGGTCATATTTTTTTGCCCC
AAAGAAATGTTTACCAAGGAGGAATTCGATGCCCTCAAATAATACTTAGAAAGTGGTGGT
CGTGTCTTAGTTTTGAGCTCTGAAGGTGGTGGTCATAAGAATCGCACAAATATAAATTTC
TTCTTGGAATAATATGGTATCAGTATCAATAACGATTGTGTCGTTAGAACTGCATTTTAT
AAATACTTCCATCCTAAGGAGACTTATGTTCATTCTGGTATTTTAAATGAAGAAGTAACA
AGAGTAGCAAATGGTTTACCTAAAGAAACAAAGAGACCCCAAAATACATTCTTGTAAAAC
GTTATTGGAAAGGATGATGAAGAAGATGAATATTAAAAGGAACAATCTAGAGTTGGTTTA
GATTTTGTTTATGCCTTTGGTGCTACCTTGACTGTTTAATAACCTGCACACGCTATTTTA
GGTTCTGGTCCTCTTTCTTACCCTTCTAATAGACCAGTTTCTGCTATCGTCTAAACTAAA
AATAATGGTAGACTTGCAGTTATTGGTTCATTCGAAATGTTTACAGATGAATATTTTGAC
AATGAAGATAACTCCAAGATTTTTGATTTCTTTATAAAATATTTGCTCACAAATGAGTGC
GAATTTGAATTTAGTCCTAAAGAACCTGATGTTGAATACTTCAAGGTTCCTGATATTGCT
GAATTAGCTGATAACCTCAAGAGTTGCTTACAAGAAAGTGACCCATTACCATTTGATAGC
AAGCAATTATTTATGACAGACTTGTTTAAGTATGATGTAGACTTAGTTCCAGAAGCTGTA
AAATTGTATGAAACTCTTGGAGTAAAGCACGATCCTCTTGCTCTTATAGTTCCTTAATTC
GAAACTCCACTCCTTGGACTTGTTTCAGCTGTTTTCCCACCTATTTTAAAAGAATTAGCT
CCTCCAAGTTTAGAATTGTTTGATTTAGATGATGAATTTGCTTCAGAAAAAGTAAGACTG
GCCTAACTCACAAATAAATGCAACAACAACGATTTAGATTATTACATTAAAGAATCAGGT
GATATCTTGGGTGTAACAGATAAAGTTAAGAACAAACATGATGCCAAAGCTATTTTAAGA
TATGTTTTAGAAGAATTAATAAATTTCAAGAAGCTCAATAACTGA

>TTHERM_00648910(gene)
AAATTAATTAGTCATTGATTAATAATAGAAAAGAATCAAACAAAAAATTAAATCTTTTTA
GAAGATAGTTAGATAGATAGATACATATTACTTACTATTTCAAAGAAAAGTTAATAAATC
CGACTAGAATAAATTATAACTAACTGCAGTCATTTAGCCGATAGACATGAGTGGAGAATA
GAAAATTATTGTCTTCAACGCTTCAAAGAAGGAGGCTGGTAACCCTAGTACAAATATTAA
AAAGATTATCAAGAAATATAAAGAAACATATAAGTGCGGCAGAAATAAAGAAGATATCAC
ATATGATAGACTAAAGATGGCTTCTTTGGTCATATTTTTTTGCCCCAAAGAAATGTTTAC
CAAGGAGGAATTCGATGCCCTCAAATAATACTTAGAAAGTGGTGGTCGTGTCTTAGTTTT
GAGCTCTGAAGGTGGTGGTCATAAGAATCGCACAAATATAAATTTCTTCTTGGAATAATA
TGGTATCAGTATCAATAACGATTGTGTCGTTAGAACTGCATTTTATAAATACTTCCATCC
TAAGGAGACTTATGTTCATTCTGGTATTTTAAATGAAGAAGTAACAAGAGTAGCAAATGG
TTTACCTAAAGAAACAAAGAGACCCCAAAATACATTCTTGTAAAACGTTATTGGAAAGGA
TGATGAAGAAGATGAATATTAAAAGGAACAATCTAGAGTTGGTTTAGATTTTGTTTATGC
CTTTGGTGCTACCTTGACTGTTTAATAACCTGCACACGCTATTTTAGGTTCTGGTCCTCT
TTCTTACCCTTCTAATAGACCAGTTTCTGCTATCGTCTAAACTAAAAATAATGGTAGACT
TGCAGTTATTGGTTCATTCGAAATGTTTACAGATGAATATTTTGACAATGAAGATAACTC
CAAGATTTTTGATTTCTTTATAAAATATTTGCTCACAAATGAGTGCGAATTTGAATTTAG
TCCTAAAGAACCTGATGTTGAATACTTCAAGGTTCCTGATATTGCTGAATTAGCTGATAA
CCTCAAGAGTTGCTTACAAGAAAGTGACCCATTACCATTTGATAGCAAGCAATTATTTAT
GACAGACTTGTTTAAGTATGATGTAGACTTAGTTCCAGAAGCTGTAAAATTGTATGAAAC
TCTTGGAGTAAAGCACGATCCTCTTGCTCTTATAGTTCCTTAATTCGAAACTCCACTCCT
TGGACTTGTTTCAGCTGTTTTCCCACCTATTTTAAAAGAATTAGCTCCTCCAAGTTTAGA
ATTGTTTGATTTAGATGATGAATTTGCTTCAGAAAAAGTAAGACTGGCCTAACTCACAAA
TAAATGCAACAACAACGATTTAGATTATTACATTAAAGAATCAGGTGATATCTTGGGTGT
AACAGATAAAGTTAAGAACAAACATGATGCCAAAGCTATTTTAAGATATGTTTTAGAAGA
ATTAATAAATTTCAAGAAGCTCAATAACTGAGAATTAACTATGTATGTATTTTGTATAAA
ATAAATTAATCACTTAAAAATTAATTGCATAATATTCGAAAATATTTTTATAATTAAGCA
AGCAGAGAAAATAAACAAATCATGCTTCCATTCAACAATTAATATATTAAAACTTAACTT
GAATTAAATTTTATTGCATTCATTTCATTCTTACTTACTTATATCATCTTGTATTGGCAT
TATCAAATCTTTTTCATATTTCTTTTTTTAAATTCTTTTTGTTTAATTTAACAAAAATAA
TCTAACAACTATCAAAAATAATTTAATTTCCTATTTTTTATA

>TTHERM_00648910(protein)
MSGEQKIIVFNASKKEAGNPSTNIKKIIKKYKETYKCGRNKEDITYDRLKMASLVIFFCP
KEMFTKEEFDALKQYLESGGRVLVLSSEGGGHKNRTNINFFLEQYGISINNDCVVRTAFY
KYFHPKETYVHSGILNEEVTRVANGLPKETKRPQNTFLQNVIGKDDEEDEYQKEQSRVGL
DFVYAFGATLTVQQPAHAILGSGPLSYPSNRPVSAIVQTKNNGRLAVIGSFEMFTDEYFD
NEDNSKIFDFFIKYLLTNECEFEFSPKEPDVEYFKVPDIAELADNLKSCLQESDPLPFDS
KQLFMTDLFKYDVDLVPEAVKLYETLGVKHDPLALIVPQFETPLLGLVSAVFPPILKELA
PPSLELFDLDDEFASEKVRLAQLTNKCNNNDLDYYIKESGDILGVTDKVKNKHDAKAILR
YVLEELINFKKLNN