Identifiers and Description

Gene Model Identifier

TTHERM_00653810

Standard Name

TWI12 (Tetrahymena piWI 12)

Aliases

PreTt12868 | 95.m00114 | 3825.m02522

Description

TWI12 piwi domain protein; Argonaute/Piwi family protein

Genome Browser (Macronucleus)



Genome Browser (Micronucleus)

External Links

Gene Ontology Annotations

Molecular Function

Biological Process

Domains

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source Identifier Score
Tetrahymena borealis EI9_00722.1 9.997093137033517e-262
Description: PAZ domain-containing protein (881 aa)
Oxytricha Contig276.0.g87 6.002718307283067e-26
Description: Piwi domain
Stentor Coeruleus SteCoe_15480 0.0000000001026187963170189
Description: None
WormBase WBGene00004179 0.000000000500206551404915
Description: locus:prg-2 status:Partially_confirmed UniProt:Q17567 protein_id:CCD62443.1
DictyBase DDB_G0289367 0.000000019990673443141236
Description: agnE on chromosome: 5 position 2710003 to 2713807

General Information

No. Gene Name(s) Paragraph Text
59 TWI12 Gene Model error: The open reading frame for the major protein product starts at an upstream in-frame ATG, adding 17 amino acids to the N-terminus of the predicted protein (Couvillion et al., Mol. Cell, 2012).

Associated Literature

  1. Ref:23084833: Couvillion MT, Bounova G, Purdom E, Speed TP, Collins K (2012) A Tetrahymena Piwi bound to mature tRNA 3' fragments activates the exonuclease Xrn2 for RNA processing in the nucleus. Molecular cell 48(4):509-20
  2. Ref:21106669: Couvillion MT, Sachidanandam R, Collins K (2010) A growth-essential Tetrahymena Piwi protein carries tRNA fragment cargo. Genes & development 24(24):2742-7
  3. Ref:19656801: Couvillion MT, Lee SR, Hogstad B, Malone CD, Tonkin LA, Sachidanandam R, Hannon GJ, Collins K (2009) Sequence, biogenesis, and function of diverse small RNA classes bound to the Piwi family proteins of Tetrahymena thermophila. Genes & development 23(17):2016-32

Sequences

>TTHERM_00653810(coding)
ATGGATCAGCAATAGATTTATAAGTTATTTTTGTATTCCAATCTTTTGAAGATGGATATA
CAATCACCCATTTATAAGCAAGATGTTTAGATAACTCCTGAAAAATTTGCTTCTAGTTCA
GATAGAGAAGCTGTATTCTTGGGAGTGCGCAAAATATTACATATCTCTCATGATATGGAC
AATTGTATTTTTTTAAAGAAAAACAATATTCACCTTAGTGAAGAAGTTTAAGAGAATCCA
TAAGCACAATGGGTTTGCTATAGCAGTAAATAAATGTACTAAGGTTAGGATAGTATGAGT
GTTTTAGGATACTAGGTTAGTATTAAATAGATTTAACAAAATGGTAGTCCTGCATTTATA
ACTACCAACAAAGAGAGATAGCTTGTTTTAAATTATATTGCAAGAGAAATTTTTTCAAAA
CTAAATTATCATTAATACTAAAAAGGGTTTTTCAATCCTATTGACCCCCCTAATGCTGCC
CTTAGTAAAGATAAAACTGTTGTTTATCAAACTTACTCATGGAATGGGCTAAGACCTAAG
GCAATTGAATTTAGAGGTAAAGTTTATCTGGAAATTGAAACCACTCCTGTGCGCTTCTTG
CGTATGAATTTGTTCTAAATTATTAACAAACTTGAAGATAAAAAAATTCCAAGAGAAGAA
ATAAGCAATTTTTTGGTAGGACGCACTGTTAAGACATCTTATTTCTCCACTAATCTATAT
TATGAAATTTTAGAAATAGATTTTAATATGACTCCTGACAGTAAATTTGTCGTAAAATAA
AACTAAATTTAAGATGAAGGAGATATGATTGCAGAAAAAGGTGATGAAGAACTCTCTTAT
TATTCTTATGTTAAGAACAAATATAGAATTAACATTAGAGACAGAGTTTAGCCAATGATT
AGAGTTCGCCCTCTTCACAAAGGCTTTAAATCCGAATTTCATAGTAGTTAAGATTAGCAA
ATGTACCTCATTCCAAGTCTTTGCAATCTTTTTGGATAGATTTCTCAAAAAGGTTTTATT
GACGATAATGTTGGAACAGAATTCTACTTTGAACCTTATGATGTATATGATTATACTAAT
TAAATTACTAGATTTTTAAAAAATAGCTCTGAAGCTTAAAGTTTGCTAAATGGATGGTAA
ATTAAAATAGGAGAAGAGTTCGAACAGATTGGTTTTAACTACCTCAAATTATCTCCTTTA
TAACTCAAAGTTAATAATGTCAATGAGTCTTTTTCTCCTAACGACTTATGCTGTAAGCGT
TTATGTAACGAATTCGATGGATATTATAAATAGCTATTCTGTTCTGATGGAGCTTTCACT
AAATTCACTGAAGTTAATAGATGGGTTATTTTTGTCCACTCTAGCGATTCACCATTAGTT
GAAGCTCTGGTCTCTTCGATCTCTCAGTTTAAGCTATACTACAATTACCCTATTTCAGAA
CCAAAATATTATAAGATAGATGATTTAAATATTGAAACATGGACAAGCACCTTTAATACT
GCCTTATCTGAGAGTCCTACTACATTTGCATTGATTATTATGAACAGTGAATTAGAGCAC
TATCACTTTTATAAAACTTGTAAGCAAGCAATTACAGTGGATAAAGGCATTTGCTGTTCA
CTTATTAAGGCTTCTACTCTCTAGCAATATGTTCCTACTTAATAATATCCATAAATACCC
CCAGGAAACTCGATTGAAGCTTTTGCAAGCCGTTTCTTATCATAAATGCAAGCTAAGCTT
GGTGAGTCACCTTGGCTTATGTAGGAATTACCATACAATTAAAATCCTTGCACAATGATA
GGGTTTAGTGTATTACGCCAACGTAATGCTAGAAAAATTATAGTAGCAGGAGCTGCTTCT
ATTAATAAATAGTATAGCAAATATCTCCCTGATTATAGAGTTATTAGTGAAGTTTCAACT
AAAATCAAGGAAGATGGTACTTTAGAGATAGTAGAGCTTTCAGAACAAGAAATAAACAAT
TCAATAACTAATAGCATGAAAGATATTCTTCAAGGATTTTTAAGTTAGTTTGCAACAACT
CACAAAATAAATCCAACCTGGGTTATTATTATTCGTGACGGTATATTTATTTAAAATGCA
CAAAATGAAAAAGATGCTATATTCTCTATGATGAGCACTCGCCGTTCCTAAAGTGAAAAC
AAATCATTCCACCTTTTGTTTGCAACATCTCGTTATCAAACTAGCTTCCGTACTTATAAT
TTCTATGGATCATCAGAACTTAATGCTAACACATAAAACGTATCTTCTCCAGGAACAGGT
GCTATAGTTGAAAAGTAGTTGAACAAGCGCGAATTTTATCTTTATACATAAAAAATAGTT
AAAAACTGTCCATTTTCTGTGCTATACAATGTATTACATATAGATAAATTTATTGGATTA
GACGAGCATTCTTTGTTAGCTGATTTCTAAGACTTGGTATATAACACTTATGTGCTAAAT
TATACATACCACACAAAGACAACTTCACCAGCTTGTGTACAAAATGCTTATAAATTAGCA
GAATTTGTTAAAATGTTTGTAACACCTGCAGGGTCTTAATAAAATACAATAGATCTATCA
AACTTGAGAGTGCTGTGCTCAAATTATAAGCTCTTCTTCATTTGA


>TTHERM_00653810(gene)
ATGGATCAGCAATAGATTTATAAGTTATTTTTGTATTCCAATCTTTTGAAGATGGATATA
CAATCACCCATTTATAAGCAAGATGTTTAGATAACTCCTGAAAAATTTGCTTCTAGTTCA
GATAGAGAAGCTGTATTCTTGGGAGTGCGCAAAATATTACATATCTCTCATGATATGGAC
AATTGTATTTTTTTAAAGAAAAACAATATTCACCTTAGTGAAGAAGTTTAAGAGAATCCA
TAAGCACAATGGGTTTGCTATAGCAGTAAATAAATGTACTAAGGTTAGGATAGTATGAGT
GTTTTAGGATACTAGGTTAGTATTAAATAGATTTAACAAAATGGTAGTCCTGCATTTATA
ACTACCAACAAAGAGAGATAGCTTGTTTTAAATTATATTGCAAGAGAAATTTTTTCAAAA
CTAAATTATCATTAATACTAAAAAGGGTTTTTCAATCCTATTGACCCCCCTAATGCTGCC
CTTAGTAAAGATAAAACTGTTGTTTATCAAACTTACTCATGGAATGGGCTAAGACCTAAG
GCAATTGAATTTAGAGGTAAAGTTTATCTGGAAATTGAAACCACTCCTGTGCGCTTCTTG
CGTATGAATTTGTTCTAAATTATTAACAAACTTGAAGATAAAAAAATTCCAAGAGAAGAA
ATAAGCAATTTTTTGGTAGGACGCACTGTTAAGACATCTTATTTCTCCACTAATCTATAT
TATGAAATTTTAGAAATAGATTTTAATATGACTCCTGACAGTAAATTTGTCGTAAAATAA
AACTAAATTTAAGATGAAGGAGATATGATTGCAGAAAAAGGTGATGAAGAACTCTCTTAT
TATTCTTATGTTAAGAACAAATATAGAATTAACATTAGAGACAGAGTTTAGCCAATGATT
AGAGTTCGCCCTCTTCACAAAGGCTTTAAATCCGAATTTCATAGTAGTTAAGATTAGCAA
ATGTACCTCATTCCAAGTCTTTGCAATCTTTTTGGATAGATTTCTCAAAAAGGTTTTATT
GACGATAATGTTGGAACAGAATTCTACTTTGAACCTTATGATGTATATGATTATACTAAT
TAAATTACTAGATTTTTAAAAAATAGCTCTGAAGCTTAAAGTTTGCTAAATGGATGGTAA
ATTAAAATAGGAGAAGAGTTCGAACAGATTGGTTTTAACTACCTCAAATTATCTCCTTTA
TAACTCAAAGTTAATAATGTCAATGAGTCTTTTTCTCCTAACGACTTATGCTGTAAGCGT
TTATGTAACGAATTCGATGGATATTATAAATAGCTATTCTGTTCTGATGGAGCTTTCACT
AAATTCACTGAAGTTAATAGATGGGTTATTTTTGTCCACTCTAGCGATTCACCATTAGTT
GAAGCTCTGGTCTCTTCGATCTCTCAGTTTAAGCTATACTACAATTACCCTATTTCAGAA
CCAAAATATTATAAGATAGATGATTTAAATATTGAAACATGGACAAGCACCTTTAATACT
GCCTTATCTGAGAGTCCTACTACATTTGCATTGATTATTATGAACAGTGAATTAGAGCAC
TATCACTTTTATAAAACTTGTAAGCAAGCAATTACAGTGGATAAAGGCATTTGCTGTTCA
CTTATTAAGGCTTCTACTCTCTAGCAATATGTTCCTACTTAATAATATCCATAAATACCC
CCAGGAAACTCGATTGAAGCTTTTGCAAGCCGTTTCTTATCATAAATGCAAGCTAAGCTT
GGTGAGTCACCTTGGCTTATGTAGGAATTACCATACAATTAAAATCCTTGCACAATGATA
GGGTTTAGTGTATTACGCCAACGTAATGCTAGAAAAATTATAGTAGCAGGAGCTGCTTCT
ATTAATAAATAGTATAGCAAATATCTCCCTGATTATAGAGTTATTAGTGAAGTTTCAACT
AAAATCAAGGAAGATGGTACTTTAGAGATAGTAGAGCTTTCAGAACAAGAAATAAACAAT
TCAATAACTAATAGCATGAAAGATATTCTTCAAGGATTTTTAAGTTAGTTTGCAACAACT
CACAAAATAAATCCAACCTGGGTTATTATTATTCGTGACGGTATATTTATTTAAAATGCA
CAAAATGAAAAAGATGCTATATTCTCTATGATGAGCACTCGCCGTTCCTAAAGTGAAAAC
AAATCATTCCACCTTTTGTTTGCAACATCTCGTTATCAAACTAGCTTCCGTACTTATAAT
TTCTATGGATCATCAGAACTTAATGCTAACACATAAAACGTATCTTCTCCAGGAACAGGT
GCTATAGTTGAAAAGTAGTTGAACAAGCGCGAATTTTATCTTTATACATAAAAAATAGTT
AAAAACTGTCCATTTTCTGTGCTATACAATGTATTACATATAGATAAATTTATTGGATTA
GACGAGCATTCTTTGTTAGCTGATTTCTAAGACTTGGTATATAACACTTATGTGCTAAAT
TATACATACCACACAAAGACAACTTCACCAGCTTGTGTACAAAATGCTTATAAATTAGCA
GAATTTGTTAAAATGTTTGTAACACCTGCAGGGTCTTAATAAAATACAATAGATCTATCA
AACTTGAGAGTGCTGTGCTCAAATTATAAGCTCTTCTTCATTTGA


>TTHERM_00653810(protein)
MDQQQIYKLFLYSNLLKMDIQSPIYKQDVQITPEKFASSSDREAVFLGVRKILHISHDMD
NCIFLKKNNIHLSEEVQENPQAQWVCYSSKQMYQGQDSMSVLGYQVSIKQIQQNGSPAFI
TTNKERQLVLNYIAREIFSKLNYHQYQKGFFNPIDPPNAALSKDKTVVYQTYSWNGLRPK
AIEFRGKVYLEIETTPVRFLRMNLFQIINKLEDKKIPREEISNFLVGRTVKTSYFSTNLY
YEILEIDFNMTPDSKFVVKQNQIQDEGDMIAEKGDEELSYYSYVKNKYRINIRDRVQPMI
RVRPLHKGFKSEFHSSQDQQMYLIPSLCNLFGQISQKGFIDDNVGTEFYFEPYDVYDYTN
QITRFLKNSSEAQSLLNGWQIKIGEEFEQIGFNYLKLSPLQLKVNNVNESFSPNDLCCKR
LCNEFDGYYKQLFCSDGAFTKFTEVNRWVIFVHSSDSPLVEALVSSISQFKLYYNYPISE
PKYYKIDDLNIETWTSTFNTALSESPTTFALIIMNSELEHYHFYKTCKQAITVDKGICCS
LIKASTLQQYVPTQQYPQIPPGNSIEAFASRFLSQMQAKLGESPWLMQELPYNQNPCTMI
GFSVLRQRNARKIIVAGAASINKQYSKYLPDYRVISEVSTKIKEDGTLEIVELSEQEINN
SITNSMKDILQGFLSQFATTHKINPTWVIIIRDGIFIQNAQNEKDAIFSMMSTRRSQSEN
KSFHLLFATSRYQTSFRTYNFYGSSELNANTQNVSSPGTGAIVEKQLNKREFYLYTQKIV
KNCPFSVLYNVLHIDKFIGLDEHSLLADFQDLVYNTYVLNYTYHTKTTSPACVQNAYKLA
EFVKMFVTPAGSQQNTIDLSNLRVLCSNYKLFFI