Identifiers and Description

Gene Model Identifier

TTHERM_00663840

Standard Name

THD3 (Tetrahymena histone deacetylase 3)

Aliases

PreTt23831 | 98.m00174 | 3736.m00072 | THD3

Description

THD3 class I histone deacetylase family protein; Histone deacetylase family protein

Genome Browser (Macronucleus)

Full Screen View


Genome Browser (Micronucleus)

Full Screen View

Gene Ontology Annotations

No Data fetched for Gene Ontology Annotations

Domains

  • ( PF00850 ) Histone deacetylase family

Gene Expression Profile

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source Identifier Score
Tetrahymena borealis EI9_17202.1 9.997093137033517e-262
Description: histone deacetylase (473 aa)
DictyBase DDB_G0268024 2.000851114308011e-136
Description: hdaA on chromosome: 1 position 1320084 to 1322172
WormBase WBGene00001834 2.9988601762256104e-132
Description: locus:hda-1 Histone deacetylase 1 status:Confirmed UniProt:O17695 protein_id:CAB03984.1
SGD YNL330C 3.999751664085691e-132
Description: RPD3 Histone deacetylase; regulates transcription, silencing, and other processes by influencing chromatin remodeling; forms at least two different complexes which have distinct functions and members
Oxytricha Contig1866.0.g68 5.0014192254601655e-126
Description: Histone deacetylase domain
Stentor Coeruleus SteCoe_31554 1.1677812485237086e-60
Description: None

General Information

No Data fetched for General Information

Associated Literature

  1. Ref:18178773: Smith JJ, Torigoe SE, Maxson J, Fish LC, Wiley EA (2008) A class II histone deacetylase acts on newly synthesized histones in Tetrahymena. Eukaryotic cell 7(3):471-82

Sequences 

>TTHERM_00663840(coding)
ATGGAAACAAAAAAAAGAGTAGCTTATTTTTACAATAACGAAATAGGTAACTACAACTAT
GGAAAGTTGCATTTAATGAACCCAAAAAGAATTTCAATGACTCATTCCTTGATTGTAGGT
TATGGTGTCTATAAAGATCTTGACGTATACACAACAAGAGAAGCCACCAAAGAAGAGATA
ATGCAGTTTCATGATTAGGATTATGTTGAGTACCTTTCTAACTATGTATCGAGTACTAAA
ATAGATTTTCTAAGAAAGAATGGATGCACTGCTCCTATCATAGATGAGGAAGCTAAAAAT
GATGTAGAAAAAAAGAGATAATATGGCATAGATGTTCAAGCTGATTGTCCTGGCTTTGAT
GGTGTCTATACCTTTAGCCAACTTTCAACAGGTGGTTCGATTGATGCAGCTCACTTAATT
ATAAATAATGCTGCAGATGTAGCTATTAACTGGGGTGGTGGATTGCATCATGCTAAGAAG
GGAGAAGCTTATGGCTTCTGTTATGTTAATGATATAGTAATATGCATTTTGGAGCTTTTA
AAAGTATTTCCTCGTGTGCTTTACATAGATATAGATGTACACCATGGAGATGGCGTAGAA
GAGGCTTTCTTTACTACAAATAGAGTAATGACAGTTAGTTTTCATGAATTTGGAGAAGAT
TTCTTTCCTGGAACAGGTGGCCTCAACAGTAGTGGAGAAGGATTGGGCAAAAATTATGCT
GTGAATGTACCACTTAGACCTGGTATGGATGATGAAAGTTATAAATAACTATTTAAAAAT
GTAATGAATAAAGTAATGGAAGTGTTTAGACCTGACGTAGTTGTATTCTAAACTGGAGCT
GATAGTTTAGCTAATGACAAAATTGGGCATTTTAATTTATCTATTAGAGGACATGGCGAA
TGCTTGACTTACATGCTAAGGTTTAATGTTCCTGTAGTAGTTTTAGGAGGAGGTGGATAT
ACTATTTAAAATGTAAGTCGTTGCTGGGCATATGAAACAGGATTACTTGTTAAAAAAAAT
TTAAATGGACCTATACCTGTTGATGATCCCTTTTTCCATTTATATGAAAAATAGAATATG
CTTCACGTTCCAATTTAGCAAGTAGAAAATAAGAATAGTAAAGAAGATTTAAATAAAATA
TAAGAAGAGGTCTTTAAGCAACTAAAAGAAGTAGATGCTGCCCCATCAATACCTTTTCAT
AATGTTCCCAAAGCATTCTAGTATGATGACGATGAATATTTCGAGGAAAATGAATAAGAT
TAACATCATGATTTTTCTGGAAATACTTATAATTTCAATAAGCTTAATGACTATATAAAC
GGATATTAAACAATGGAGGTCGAATAAAATGAAGAAGTTGGAGTATATAGAAAACAACCT
CTATTAATAGAAAAGAATAGTAGTAGATTTAATCATATTTGA


>TTHERM_00663840(gene)
ATGGAAACAAAAAAAAGAGTAGCTTATTTTTACAATAACGAAATAGGTAACTACAACTAT
GGAAAGTTGCATTTAATGAACCCAAAAAGAATTTCAATGACTCATTCCTTGATTGTAGGT
TATGGTGTCTATAAAGATCTTGACGTATACACAACAAGAGAAGCCACCAAAGAAGAGATA
ATGCAGTTTCATGATTAGGATTATGTTGAGTACCTTTCTAACTATGTATCGAGTACTAAA
ATAGATTTTCTAAGAAAGAATGGATGCACTGCTCCTATCATAGATGAGGAAGCTAAAAAT
GATGTAGAAAAAAAGAGATAATATGGCATAGATGTTCAAGCTGATTGTCCTGGCTTTGAT
GGTGTCTATACCTTTAGCCAACTTTCAACAGGTAATAAATTATATTTCCATTTTGAACAA
GAATTTGAGTTAGTTGGATTTACAGTTTTCAAAATATATACTAGAAAAAATTTACTTGCT
TAAATCTTCTCCTTCTATTTAAAGAATTTGAGTAGAAGAAAGTAATAAATATTCAATAAA
TAATTAATTATTATCCTAGAAAATGGTGAAAAATAATAGTTAAACACAATTTCAAAAAAA
ATTATTTTTAACCCAAATTTATATTTTAAAATATTTAAAAAATATTCATTTTAGTAAAAA
TAAAATTTAAATTTAATATCTTAATATTTTTTTTCTTTAAACCATAATTAGGTGGTTCGA
TTGATGCAGCTCACTTAATTATAAATAATGCTGCAGATGTAGCTATTAACTGGGGTGGTG
GATTGCATCATGCTAAGAAGGGAGAAGCTTATGGCTTCTGTTATGTTAATGATATAGTAA
TATGCATTTTGGAGCTTTTAAAAGTATTTCCTCGTGTGCTTTACATAGATATAGATGTAC
ACCATGGAGATGGCGTAGAAGAGGCTTTCTTTACTACAAATAGAGTAATGACAGTTAGTT
TTCATGAATTTGGAGAAGATTTCTTTCCTGGAACAGGTGGCCTCAACAGTAGTGGAGAAG
GATTGGGCAAAAATTATGCTGTGAATGTACCACTTAGACCTGGTATGGATGATGAAAGTT
ATAAATAACTATTTAAAAATGTAATGAATAAAGTAATGGAAGTGTTTAGACCTGACGTAG
TTGTATTCTAAACTGGAGCTGATAGTTTAGCTAATGACAAAATTGGGCATTTTAATTTAT
CTATTAGAGGACATGGCGAATGCTTGACTTACATGCTAAGGTTTAATGTTCCTGTAGTAG
TTTTAGGAGGAGGTGGATATACTATTTAAAATGTAAGTCGTTGCTGGGCATATGAAACAG
GATTACTTGTTAAAAAAAATTTAAATGGACCTATACCTGTTGATGATCCCTTTTTCCATT
TATATGAAAAATAGAATATGCTTCACGTTCCAATTTAGCAAGTAGAAAATAAGAATAGTA
AAGAAGATTTAAATAAAATATAAGAAGAGGTCTTTAAGCAACTAAAAGAAGTAGATGCTG
CCCCATCAATACCTTTTCATAATGTTCCCAAAGCATTCTAGTATGATGACGATGAATATT
TCGAGGAAAATGAATAAGATTAACATCATGATTTTTCTGGAAATACTTATAATTTCAATA
AGCTTAATGACTATATAAACGGATATTAAACAATGGAGGTCGAATAAAATGAAGAAGTTG
GAGTATATAGAAAACAACCTCTATTAATAGAAAAGAATAGTAGTAGATTTAATCATATTT
GA


>TTHERM_00663840(protein)
METKKRVAYFYNNEIGNYNYGKLHLMNPKRISMTHSLIVGYGVYKDLDVYTTREATKEEI
MQFHDQDYVEYLSNYVSSTKIDFLRKNGCTAPIIDEEAKNDVEKKRQYGIDVQADCPGFD
GVYTFSQLSTGGSIDAAHLIINNAADVAINWGGGLHHAKKGEAYGFCYVNDIVICILELL
KVFPRVLYIDIDVHHGDGVEEAFFTTNRVMTVSFHEFGEDFFPGTGGLNSSGEGLGKNYA
VNVPLRPGMDDESYKQLFKNVMNKVMEVFRPDVVVFQTGADSLANDKIGHFNLSIRGHGE
CLTYMLRFNVPVVVLGGGGYTIQNVSRCWAYETGLLVKKNLNGPIPVDDPFFHLYEKQNM
LHVPIQQVENKNSKEDLNKIQEEVFKQLKEVDAAPSIPFHNVPKAFQYDDDEYFEENEQD
QHHDFSGNTYNFNKLNDYINGYQTMEVEQNEEVGVYRKQPLLIEKNSSRFNHI