Identifiers and Description

Gene Model Identifier

TTHERM_00700970

Standard Name

PRP4 (pre-mRNA processing factor 4)

Aliases

PreTt14894 | 109.m00112

Description

PRP4 U4 U6 small nuclear ribonucleoprotein Prp4; U4/U6 small nuclear ribonucleoprotein

Genome Browser (Macronucleus)

Full Screen View

No Genome Browser Data Present

Genome Browser (Micronucleus)

Full Screen View

No Genome Browser Data Present

External Links

• Uniprot
• Alphafold

Gene Ontology Annotations

No Data fetched for Gene Ontology Annotations

Domains

• ( PF00400 ) WD domain, G-beta repeat
• ( PF01839 ) FG-GAP repeat
• ( PF08799 ) pre-mRNA processing factor 4 (PRP4)

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

No results were calculated for this gene in GeneMania.

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source	Identifier	Score
Tetrahymena borealis	EI9_01239.1	9.997093137033517e-262
	Description: hypothetical protein (536 aa)
Oxytricha	Contig6514.0.g50	7.002925050786358e-139
	Description: WD domain, G-beta repeat
WormBase	WBGene00007972	1.999469658314961e-75
	Description: locus:prp-4 status:Partially_confirmed UniProt:Q93339 protein_id:CAB02270.1
DictyBase	DDB_G0287635	6.000034430729774e-56
	Description: prpf4 on chromosome: 5 position 533367 to 535169
SGD	YPR178W	7.997143886232904e-48
	Description: PRP4 Splicing factor, component of the U4/U6-U5 snRNP complex
Stentor Coeruleus	SteCoe_34005	4.359610000063081e-28
	Description: None

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>TTHERM_00700970(coding)
ATGTCTTCAGATAAGCAAGAAGAGAGAATCTATTATGGTTCTCTTGAAGAATAGGAGAGA
CAAAGAATAATAGATGAAGAAAAGCAAAAATAAGAAAGAAAATAGCAATAAGCTTCTCAA
TCTGCTCCTAATAGCAGCTCAGATTAATAATAATCATAATAAGTCTAAACAGGATAATTA
AAAAGCTTGGGAGGAAAGTAATTAAAATCTTTAGCTGACAAAGATAAGTCACAAACAAAT
GTGTAGATAGAAGTATTGGAATTATCAGAACATGCTCTAGAAGAAAAGAGAAGACATGAT
GAAAATATGAGAAAGTTAGAACTTCAAAAAAAAGCATCAACTATGATTGTACCTACAAAT
GATAAAGAAGTAAAATATAGATTGAGATAATTAGGTCATCCTATTTGCTACTTTGGTGAA
AATAATGCTGACAGAAGAGAGCGTTTGAAAAAGGTTTAAGCTGAATATATTATGGAACAC
GGCGATTTACCTCAATTTATTAAATTAGAAGAAAAGCAAAAGTAAAATGATGAGAATGAA
CATTTCTACTACCCAGGTATTAAAGAATTGAAAGAAATTAGAGAAGAAATAGCTACTTAC
TCTCTTCTTAAGTCTTCGCGTAGAGTCTATAAATCTAAAGTTGGTAGAATGGAGGAAGAC
CCATTAGTAGAAGAAAAAAAGCAAATTAGTTCTCTCAACAGAGCTATGAAATTTGATGTT
TGTGTTAGTTAATTCGCTGATTCAAGTATTGTTTTAAGAGGTGCTTTTTCTCCTGAATGT
GATCTTTTAGCAACAGCAGGCGGTTCTGGAGTCTCCAAAATATGGAATATTCCTAATTCA
GATTTAAAATGCAGATTAGAAGGCCATCTTAGTAAGGTCCATGATATTGTTTGGAATCCA
GAAACAGGTAGTATGAGTCATAACTCTTTTGGGCATTTGGCTACAGGATCTAGTGATACA
AATATTCGTTTATGGACTATGGACCCTGCTGCTGAATTATAAAAATCAATTGTTTTAAGT
GGACATGAAGATAGAGTTAATAGACTCAGTTTCCATCAAACAGGAAAATATCTCTTTTCT
ACTTCTCACGATATGACTTGGCGTTTTTGGGACATCGAGCGTCAGAAAGAAATTTACGTA
TAAACTGGTCATACTAAAGGAGTATATGCTAATGCACTTCATCCTGATGGATCTCTTATT
TTTACAGGAGATCTCTAAGGTTATGGAATGATTTGGGATTTAAGAACTGGTAAAGGTATA
CTACCTTTTTCAGGTTATCATGTTAAAGGTATTTTAGCAGCTGATTTCTCTGAAAATGGT
TTCTAATTTGTAACTGGTAGTGAAGATAATACACTTAGAGTATTCGATATTAGAAGAAGG
GCTTGTATGCATACTCTTCCTGGTCATCTTAAACTTATCAGTGATGTTAAATTTTAGAAA
AATGGAAGCAATTACTTTGTCTCTGTTAGTTATGACAACACACTCAAATTATGGAATGCA
AAAGACTTTTCACTAGCCAAAACATATAAATCCCACGAATCTAAAATCACTTCAGTTACC
TTGGATTAATCTCAGAAGTATTTTGCAACTACATCTCTAGATAGAAAGTGGATGTTATGG
GAATATAAAGATTTCTGA

>TTHERM_00700970(gene)
ATGTCTTCAGATAAGCAAGAAGAGAGAATCTATTATGGTTCTCTTGAAGAATAGGAGAGA
CAAAGAATAATAGATGAAGAAAAGCAAAAATAAGAAAGAAAATAGCAATAAGCTTCTCAA
TCTGCTCCTAATAGCAGCTCAGATTAATAATAATCATAATAAGTCTAAACAGGATAATTA
AAAAGCTTGGGAGGAAAGTAATTAAAATCTTTAGCTGACAAAGATAAGTCACAAACAAAT
GTGTAGATAGAAGTATTGGAATTATCAGAACATGCTCTAGAAGAAAAGAGAAGACATGAT
GAAAATATGAGAAAGTTAGAACTTCAAAAAAAAGCATCAACTATGATTGTACCTACAAAT
GATAAAGAAGTAAAATATAGATTGAGATAATTAGGTCATCCTATTTGCTACTTTGGTGAA
AATAATGCTGACAGAAGAGAGCGTTTGAAAAAGGTTTAAGCTGAATATATTATGGAACAC
GGCGATTTACCTCAATTTATTAAATTAGAAGAAAAGCAAAAGTAAAATGATGAGAATGAA
CATTTCTACTACCCAGGTATTAAAGAATTGAAAGAAATTAGAGAAGAAATAGCTACTTAC
TCTCTTCTTAAGTCTTCGCGTAGAGTCTATAAATCTAAAGTTGGTAGAATGGAGGAAGAC
CCATTAGTAGAAGAAAAAAAGCAAATTAGTTCTCTCAACAGAGCTATGAAATTTGATGTT
TGTGTTAGTTAATTCGCTGATTCAAGTATTGTTTTAAGAGGTGCTTTTTCTCCTGAATGT
GATCTTTTAGCAACAGCAGGCGGTTCTGGAGTCTCCAAAATATGGAATATTCCTAATTCA
GATTTAAAATGCAGATTAGAAGGCCATCTTAGTAAGGTCCATGATATTGTTTGGAATCCA
GAAACAGGTAGTATGAGTCATAACTCTTTTGGGCATTTGGCTACAGGATCTAGTGATACA
AATATTCGTTTATGGACTATGGACCCTGCTGCTGAATTATAAAAATCAATTGTTTTAAGT
GGACATGAAGATAGAGTTAATAGACTCAGTTTCCATCAAACAGGAAAATATCTCTTTTCT
ACTTCTCACGATATGACTTGGCGTTTTTGGGACATCGAGCGTCAGAAAGAAATTTACGTA
TAAACTGGTCATACTAAAGGAGTATATGCTAATGCACTTCATCCTGATGGATCTCTTATT
TTTACAGGAGATCTCTAAGGTTATGGAATGATTTGGGATTTAAGAACTGGTAAAGGTATA
CTACCTTTTTCAGGTTATCATGTTAAAGGTATTTTAGCAGCTGATTTCTCTGAAAATGGT
TTCTAATTTGTAACTGGTAGTGAAGATAATACACTTAGAGTATTCGATATTAGAAGAAGG
GCTTGTATGCATACTCTTCCTGGTCATCTTAAACTTATCAGTGATGTTAAATTTTAGAAA
AATGGAAGCAATTACTTTGTCTCTGTTAGTTATGACAACACACTCAAATTATGGAATGCA
AAAGACTTTTCACTAGCCAAAACATATAAATCCCACGAATCTAAAATCACTTCAGTTACC
TTGGATTAATCTCAGAAGTATTTTGCAACTACATCTCTAGATAGAAAGTGGATGTTATGG
GAATATAAAGATTTCTGA

>TTHERM_00700970(protein)
MSSDKQEERIYYGSLEEQERQRIIDEEKQKQERKQQQASQSAPNSSSDQQQSQQVQTGQL
KSLGGKQLKSLADKDKSQTNVQIEVLELSEHALEEKRRHDENMRKLELQKKASTMIVPTN
DKEVKYRLRQLGHPICYFGENNADRRERLKKVQAEYIMEHGDLPQFIKLEEKQKQNDENE
HFYYPGIKELKEIREEIATYSLLKSSRRVYKSKVGRMEEDPLVEEKKQISSLNRAMKFDV
CVSQFADSSIVLRGAFSPECDLLATAGGSGVSKIWNIPNSDLKCRLEGHLSKVHDIVWNP
ETGSMSHNSFGHLATGSSDTNIRLWTMDPAAELQKSIVLSGHEDRVNRLSFHQTGKYLFS
TSHDMTWRFWDIERQKEIYVQTGHTKGVYANALHPDGSLIFTGDLQGYGMIWDLRTGKGI
LPFSGYHVKGILAADFSENGFQFVTGSEDNTLRVFDIRRRACMHTLPGHLKLISDVKFQK
NGSNYFVSVSYDNTLKLWNAKDFSLAKTYKSHESKITSVTLDQSQKYFATTSLDRKWMLW
EYKDF