Identifiers and Description

Gene Model Identifier

TTHERM_00711970

Standard Name

RAB55 (RAB GTPase 55)

Aliases

PreTt16857 | 112.m00101

Description

RAB55 small guanosine triphosphatase family (GTPase)-like Ras family protein; Novel Rab family protein; small monomeric GTPase that regulates membrane fusion and fission events

Genome Browser (Macronucleus)

Full Screen View

No Genome Browser Data Present

Genome Browser (Micronucleus)

Full Screen View

No Genome Browser Data Present

External Links

• Uniprot
• Alphafold

Gene Ontology Annotations

Cellular Component

• intracellular anatomical structure (IEA) | GO:0005622

Molecular Function

• GTP binding (IEA) | GO:0005525

Biological Process

• small GTPase-mediated signal transduction (IEA) | GO:0007264

Domains

• ( PF00025 ) ADP-ribosylation factor family
• ( PF00071 ) Ras family
• ( PF08477 ) Ras of Complex, Roc, domain of DAPkinase
• ( TIGR00231 ) small GTP-binding protein domain

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

No results were calculated for this gene in GeneMania.

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source	Identifier	Score
Tetrahymena borealis	EI9_14140.1	3.998604088504543e-111
	Description: Ras family protein (196 aa)
WormBase	WBGene00014208	3.998604088504543e-111
	Description: status:Partially_confirmed UniProt:Q23388 protein_id:CAA93884.2
Oxytricha	Contig15751.0.0.g87	4.000139296874041e-45
	Description: Ras family
WormBase	WBGene00004268	9.997441244797434e-45
	Description: locus:rab-5 status:Partially_confirmed UniProt:P91857 protein_id:CAB04205.1
SGD	YLR262C	3.00039543526891e-44
	Description: YPT6 Rab family GTPase, Ras-like GTP binding protein involved in the secretory pathway, required for fusion of endosome-derived vesicles with the late Golgi, maturation of the vacuolar carboxypeptidase Y; has similarity to the human GTPase, Rab6
DictyBase	DDB_G0268068	2.0000236365077126e-43
	Description: rab6 on chromosome: 1 position 1398472 to 1399280
Stentor Coeruleus	SteCoe_36776	7.095474162284704e-23
	Description: None

General Information

No Data fetched for General Information

Associated Literature

1. Ref:16933976: Eisen JA, Coyne RS, Wu M, Wu D, Thiagarajan M, Wortman JR, Badger JH, Ren Q, Amedeo P, Jones KM, Tallon LJ, Delcher AL, Salzberg SL, Silva JC, Haas BJ, Majoros WH, Farzad M, Carlton JM, Smith RK, Garg J, Pearlman RE, Karrer KM, Sun L, Manning G, Elde NC, Turkewitz AP, Asai DJ, Wilkes DE, Wang Y, Cai H, Collins K, Stewart BA, Lee SR, Wilamowska K, Weinberg Z, Ruzzo WL, Wloga D, Gaertig J, Frankel J, Tsao CC, Gorovsky MA, Keeling PJ, Waller RF, Patron NJ, Cherry JM, Stover NA,

Sequences

>TTHERM_00711970(coding)
ATGTAAATGCAATAGATATAAGTTAAAACAGTTTTTTTAGGAGATGCAAATGTAGGTAAA
AGCAGCATTCTCTGTAGATTTATAGATGATTAGTTTGATGAAAATATTTAGGCAACTTCT
GGAGCTGATTTTAAAGTTAAATCAATCACTTACAACAATAAAAAAATAGATTTTCATCTT
TGGGATACAGCTGGACAAGAACGCTTTCGCTCTCTTACATAGCTATACTATAAAGATGCT
TCTGTGGCTTGCATAGTTTATGACATAACAAATAGGAATTCGTTTGAAGTTTTAAATTAT
TGGTTTAAAGAGTTGAAATAGCATGCCAAAGAAAATATTATAAAAATTATAATTGGCAAC
AAAATGGATTTAAGTCAATAATAATAAGTCCAATTAGACAAGGCACAAACCATGGCTAAA
ACTAACGATGCTATTCTCGTATTAACAAGTGCAAGAGAAGGAACAGGAGTTCAAGAAGTC
TTTTAAAAGATAGCAGTTTAAATAGAGTAATCACAATCTGAGCAAATTAAATAAAAGCAA
GCCACAAAAATTATGAAGCCTTAAGAATAAAAAAAACCATCCTGTTGCTGA

>TTHERM_00711970(gene)
ATGTAAATGCAATAGATATAAGTTAAAACAGTTTTTTTAGGAGATGCAAGTAATCAGAAC
ATATTATGAATGGTGTGATTGAGTCTAAATTTCATTTTTTAATTTTAATTAGATGTAGGT
AAAAGCAGCATTCTCTGTAGATTTATAGATGATTAGTTTGATGAAAATATTTAGGCAACT
TCTGGAGCTGATTTTAAAGTTAAATCAATCACTTACAACAATAAAAAAATAGATTTTCAT
GTAAGTTGGTTAATTTAGAATTATTTAAGCAGCTAATTTAATCATTTTTTATTTTTCTTC
GTTTATTAAGCTTTGGGATACAGCTGGACAAGAACGCTTTCGCTCTCTTACATAGCTATA
CTATAAAGATGCTTCTGTGGCTTGCATAGTTTATGACATAACAAATAGGAATTCGTTTGA
AGTTTTAAATTATTGGTTTAAAGAGTTGAAATAGCATGCCAAAGAAAATATTAGTATGAA
TTATCAAATCCTTCAATACAAATTATTTTCTTGTTTATTTATTTCTTAGGAATTAATAAC
ATTTTTTTAAATAGTAAAAATTATAATTGGCAACAAAATGGATTTAAGTCAATAATAATA
AGTCCAATTAGACAAGGCACAAACCATGGCTAAAGTAAAACAAGCAACTTGTCTTTATTT
GTTGATACTTGTTTTATTAATATTTAGAAATATTTTAATTAGGAGAACATAATATTTGGT
ATTAATTTTATATTTATTTATTTAATAAGACTAACGATGCTATTCTCGTATTAACAAGTG
CAAGAGAAGGAACAGGAGTTCAAGTAGAATTTATTTAGTATAAACAAAAATTTACCTATT
TCATTTATTTACTTATTTAATCAAAGGAAGTCTTTTAAAAGATAGCAGTTTAAATAGAGT
AATCACAATCTGAGCAAATTAAATAAAAGCAAGCCACAAAAATTATGAAGCCTTAAGAAT
AAAAAAAACCATCCTGTTGCTGA

>TTHERM_00711970(protein)
MQMQQIQVKTVFLGDANVGKSSILCRFIDDQFDENIQATSGADFKVKSITYNNKKIDFHL
WDTAGQERFRSLTQLYYKDASVACIVYDITNRNSFEVLNYWFKELKQHAKENIIKIIIGN
KMDLSQQQQVQLDKAQTMAKTNDAILVLTSAREGTGVQEVFQKIAVQIEQSQSEQIKQKQ
ATKIMKPQEQKKPSCC