Identifiers and Description

Gene Model Identifier

TTHERM_00711980

Standard Name

RAB5A

Aliases

PreTt16858 | 112.m00102

Description

RAB5A small guanosine triphosphatase family (GTPase)-like Ras family protein; Rab V family protein; small monomeric GTPase that regulates membrane fusion and fission events

Genome Browser (Macronucleus)

Full Screen View

No Genome Browser Data Present

Genome Browser (Micronucleus)

Full Screen View

No Genome Browser Data Present

External Links

• Uniprot
• Alphafold

Gene Ontology Annotations

Cellular Component

• intracellular anatomical structure (IEA) | GO:0005622

Molecular Function

• GTP binding (IEA) | GO:0005525

Biological Process

• small GTPase-mediated signal transduction (IEA) | GO:0007264

Domains

• ( PF00025 ) ADP-ribosylation factor family
• ( PF00071 ) Ras family
• ( PF01926 ) GTPase of unknown function
• ( PF08477 ) Miro-like protein
• ( TIGR00231 ) small GTP-binding protein domain

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

No results were calculated for this gene in GeneMania.

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source	Identifier	Score
Tetrahymena borealis	EI9_14141.1	1.9992982665753866e-121
	Description: small GTP-binding protein domain-containing protein (204 aa)
WormBase	WBGene00004268	2.9987037581344066e-55
	Description: locus:rab-5 status:Partially_confirmed UniProt:P91857 protein_id:CAB04205.1
Oxytricha	Contig9887.0.g77	3.998181939598921e-51
	Description: Ras family
DictyBase	DDB_G0271984	7.002411919958887e-50
	Description: rab5A on chromosome: 2 position 1113320 to 1114208
SGD	YOR089C	2.999661265281073e-47
	Description: VPS21 Rab family GTPase required for endocytic transport and for sorting of vacuolar hydrolases; localized in endocytic intermediates; detected in mitochondria; geranylgeranylation required for membrane association; mammalian Rab5 homolog
Stentor Coeruleus	SteCoe_24212	4.780892883885469e-25
	Description: None

General Information

No Data fetched for General Information

Associated Literature

1. Ref:16933976: Eisen JA, Coyne RS, Wu M, Wu D, Thiagarajan M, Wortman JR, Badger JH, Ren Q, Amedeo P, Jones KM, Tallon LJ, Delcher AL, Salzberg SL, Silva JC, Haas BJ, Majoros WH, Farzad M, Carlton JM, Smith RK, Garg J, Pearlman RE, Karrer KM, Sun L, Manning G, Elde NC, Turkewitz AP, Asai DJ, Wilkes DE, Wang Y, Cai H, Collins K, Stewart BA, Lee SR, Wilamowska K, Weinberg Z, Ruzzo WL, Wloga D, Gaertig J, Frankel J, Tsao CC, Gorovsky MA, Keeling PJ, Waller RF, Patron NJ, Cherry JM, Stover NA,

Sequences

>TTHERM_00711980(coding)
ATGTACGCAGAAGAAATTAAAGTTGTCATATTAGGAAATTCAGGTGTTGGAAAAAGCAGC
ATTATGATGAGATTTGTCAAGGATGAGTTTTCAGCTACTTAGCCAACAACAATGGGTGCA
GCATTTATGTCAAAAATAATCAAGACAAATGATAATTAATTTAAATTTTAGATTTGGGAT
ACTGCAGGACAAGAGAAGTATAAATCTTTGGCACCCCTTTACTATAGAGAGGCCAGAATA
GGAATTGTAGTTTATGATATAACTTCTTTAGCTTCTTTTGGAGTATTAAAGACTTGGATT
ACAGAATTACAAAAATAAGGCCCAGAAAACTTGATATTAGCAATAGTCGGCAATAAATCA
GATTTACAGGATAAATAAGAAGTTCCTTACGAAGATGCAATGAATTTCGCTAAGTAAGTT
GACGCCCTTTTTGAGCTGACTAGTGCCAAAGAAAACAGAGGAATCAATGATTTATTCATG
AAGTTAGCTAGTAAAATCGAGTAGTAAAAAATATAAAACAGCATGAAAAAAAATGTCAGT
AGTTAATCTTTTGCAGTTAATAGCAATTAACATAATAAACAAGGATCTTGCCCCTGTTGA

>TTHERM_00711980(gene)
ATGTACGCAGAAGAAATTAAAGTTGTCATATTAGGAAATTCAGGTTTTTTTTAGAACTTT
TGACAATATTCCAAACAAAAGTATTAATTAACCCTATTTGGTTATTCTAAAAAAGGTGTT
GGAAAAAGCAGCATTATGATGAGATTTGTCAAGGATGAGTTTTCAGCTACTTAGCCAACA
ACAATGGGTGCAGCATTTATGTCAAAAATAATCAAGACAAATGATAATTAATTTAAATTT
TAGGTAACAAATTATTTCTACTGATTATATTGAAAGAAAGAAATAAACAAACATATTAAT
TAATTGAACAGATTTGGGATACTGCAGGACAAGAGAAGTATAAATCTTTGGCACCCCTTT
ACTATAGAGGTAAGTAAACTTTATAAGTTTAATTTAAAATTGCAAAATTTATTTTTATAT
AAAAAGAGGCCAGAATAGGAATTGTAGTTTATGATATAACTTCTTTAGCTTCTTTTGGAG
TATTAAAGACTTGGATTACAGAATTACAAAAATAAGGCCCAGAAAACTTGAGTAAATAAA
TAAAATTAAGATGATTAAGGACTAGAATTGATTCATTGATTGTATTTATAAATAATAAAA
ATAGTATTAGCAATAGTCGGCAATAAATCAGATTTACAGGATAAATAAGAAGTTCCTTAC
GAAGATGCAATGAATTTCGCTAAGGTATAATTTTAGAACAAACTAAACAAAGCAGCAATT
TATTAATTAATTGAAATTAATAATTCTTTTATTAAAAAACTAAAAAGTAAGTTGACGCCC
TTTTTGAGCTGACTAGTGCCAAAGAAAACAGAGGAATCAATGTAAAAATAGCATTTTATA
CATTTAGAATGATTTGAAATAAATAAACTTTTAATTATTCGTTCATTCATTTTAATTCCT
TCATTAATTTAATTGGTTGATTAATTATTTAGGATTTATTCATGAAGTTAGCTAGTAAAA
TCGAGTAGTAAAAAATATAAAACAGCATGAAAAAAAATGTCAGTAGTTAATCTTTTGCAG
TTAATAGCAATTAACATAATAAACAAGGATCTTGCCCCTGTTGA

>TTHERM_00711980(protein)
MYAEEIKVVILGNSGVGKSSIMMRFVKDEFSATQPTTMGAAFMSKIIKTNDNQFKFQIWD
TAGQEKYKSLAPLYYREARIGIVVYDITSLASFGVLKTWITELQKQGPENLILAIVGNKS
DLQDKQEVPYEDAMNFAKQVDALFELTSAKENRGINDLFMKLASKIEQQKIQNSMKKNVS
SQSFAVNSNQHNKQGSCPC