Identifiers and Description

Gene Model Identifier

TTHERM_00729230

Standard Name

IBD1 (Interactive BromoDomain Protein 1)

Aliases

PreTt07324 | 118.m00152 | 3739.m00074 | Brop-5

Description

IBD1 bromodomain protein; Bromodomain containing protein; Member of the SWI/SNF, SAGA, SWR complexes and a putative HMT complex during vegetative growth; Member of the SAGA and SWR complex during conjugation at 5 hours; Bromodomain

Genome Browser (Macronucleus)

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Genome Browser (Micronucleus)

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External Links

Gene Ontology Annotations

No Data fetched for Gene Ontology Annotations

Domains

  • ( PF00439 ) Bromodomain
  • ( PF17035 ) Bromodomain extra-terminal - transcription regulation

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

No Data fetched for Homologs

General Information

No Data fetched for General Information

Associated Literature

  1. Ref:31664892: Saettone A, Ponce M, Nabeel-Shah S, Fillingham J (2019) RACS: rapid analysis of ChIP-Seq data for contig based genomes. BMC bioinformatics 20(1):533
  2. Ref:29523178: Saettone A, Garg J, Lambert JP, Nabeel-Shah S, Ponce M, Burtch A, Thuppu Mudalige C, Gingras AC, Pearlman RE, Fillingham J (2018) The bromodomain-containing protein Ibd1 links multiple chromatin-related protein complexes to highly expressed genes in Tetrahymena thermophila. Epigenetics & chromatin 11(1):10

Sequences 

>TTHERM_00729230(coding)
ATGTCAGGTTTTAAGTCTTCTCTTAAATTAAACTAGCATACTAATATAGGAAAAGAAGAA
CTCAAAAAGCTAAATCAAATGCTAAGTTAGCTCTTGCAAAACAATGATTCAATTGAATTT
AGATAAGCAGTTGATTGGAAAGCTTTGGGTTTGATGGACTATCCAAATATTATTAAATAC
CCCATGGATTTAGGCACATGTAAAGAAAAGTTAAAGAATAATGAATACAACTTCGTCGAA
GATTGCCTTGATGATATATAAATAGTTTGGGATAACTGTAAAAATTATAATGCTGAAGGA
TCTTGGATTTATAAATTAGCAGAAAAGTTGGAAAAGCACTTTAAAAATATGATTAAGAAT
TATCTCCCTTCCATATAATTTATGAATGCTGTAGTCAAAAAGGAAAAGCTCTCCTAGATG
AAGATTAATCAAGATGAGAATAGTTCATCTCAAAATGGAGACTAACCAACTCCAGCTAAT
AATACAACTAATGGAAACAAAAATAATGATGCAAATAATGGTACAAGCTAGAATTAAAAT
TAAATATATCAAGAAGAAGAAGCCAGTGAATCTATAACATCTTAAGATAAAATATTATTC
TCCTAGAAAATAAAGATGCTACCCACTGAATAGCTCGGTATGATAGTACTTATGATTTAG
AATAGTGCTTCTTAAGCATTTAAAGATATTGATAAAGAAAAATGTTAGATTCTAGTAGAC
TAAATAGATCCAGAAACATTTAAGAAAATTAATCAGTAAATCGATTTATGGAATGTTAGT
ACTGAAACTACTACAAAGAGAGTGAAGATTTGA



>TTHERM_00729230(gene)
TATTTATCAAAAAAGAAAGAAGATTTAATTAACTTCATTGAAAAATAATAAAAATTGAGA
TAAAATAAACAAAAGGAATAAATAAAAGTATTTAAAAAAAGAAAATAGCTTTTCATAATA
TATATTTAAAAATAGAAATGTCAGGTTTTAAGTCTTCTCTTAAATTAAACTAGCATACTA
ATATAGGAAAAGAAGAACTCAAAAAGCTAAATCAAATGCTAAGTTAGCTCTTGCAAAACA
ATGATTCAATTGAATTTAGATAAGCAGTTGATTGGAAAGCTTTGGGTTTGATGGACTATC
CAAATATTATTAAATACCCCATGGATTTAGGCACATGTAAAGAAAAGTTAAAGAATAATG
AATACAACTTCGTCGAAGATTGCCTTGATGATATATAAATAGTTTGGGATAACTGTAAAA
ATTATAATGCTGAAGGATCTTGGATTTATAAATTAGCAGAAAAGTTGGAAAAGCACTTTA
AAAATATGATTAAGAATTATCTCCCTTCCATATAATTTATGAATGCTGTAGTCAAAAAGG
AAAAGCTCTCCTAGATGAAGATTAATCAAGATGAGAATAGTTCATCTCAAAATGGAGACT
AACCAACTCCAGCTAATAATACAACTAATGGAAACAAAAATAATGATGCAAATAATGGTA
CAAGCTAGAATTAAAATTAAATATATCAAGAAGAAGAAGCCAGTGAATCTATAACATCTT
AAGATAAAATATTATTCTCCTAGAAAATAAAGATGCTACCCACTGAATAGCTCGGTATGA
TAGTACTTATGATTTAGAATAGTGCTTCTTAAGCATTTAAAGATATTGATAAAGAAAAAT
GTTAGATTCTAGTAGACTAAATAGATCCAGAAACATTTAAGAAAATTAATCAGTAAATCG
ATTTATGGAATGTTAGTACTGAAACTACTACAAAGAGAGTGAAGATTTGAAGTAGAAAGA
AGAAATTTTAAAGAAGCTTGTGTGGCTATTTAAACAATTTTACTGCTAAATATGATAAAC
TTAGTTAATTACTATAATATTTTTATATTCATTTTAATAAAGATTGCTTGCTGGAGAAAT
ATATTTAGATAATTTACCAAGATAAGCTTGACTTAAAATAAAAATTCTTATTTGGTAGAA
ATAATTATAAATATAAACCTTTTTATTCATTTAATTAATTGAATTTTTGTAATGATTTTT
TGTAACATATGATGCATATTTGCTTACTGGTATCTTATAATTGC



>TTHERM_00729230(protein)
MSGFKSSLKLNQHTNIGKEELKKLNQMLSQLLQNNDSIEFRQAVDWKALGLMDYPNIIKY
PMDLGTCKEKLKNNEYNFVEDCLDDIQIVWDNCKNYNAEGSWIYKLAEKLEKHFKNMIKN
YLPSIQFMNAVVKKEKLSQMKINQDENSSSQNGDQPTPANNTTNGNKNNDANNGTSQNQN
QIYQEEEASESITSQDKILFSQKIKMLPTEQLGMIVLMIQNSASQAFKDIDKEKCQILVD
QIDPETFKKINQQIDLWNVSTETTTKRVKI