Identifiers and Description

Gene Model Identifier

TTHERM_00732640

Standard Name

RPL16 (Ribosomal Protein of the Large subunit #16)

Aliases

PreTt02785 | 119.m00110 | RPL13-E.coli | RPL13A

Description

RPL16 60S ribosomal protein L13/L16; Homolog of yeast RPL16, Human RPL13A, Bacteria RPL13; Ribosomal protein L13 containing protein; Large ribosomal subunit protein uL13

Genome Browser (Macronucleus)

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Genome Browser (Micronucleus)

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External Links

Gene Ontology Annotations

Molecular Function

Biological Process

  • asymmetric protein localization (IEA) | GO:0008105
  • basement membrane organization (IEA) | GO:0071711
  • cell wall modification involved in fruit ripening (IEA) | GO:0009829
  • coenzyme A metabolic process (IEA) | GO:0015936
  • heme A biosynthetic process (IEA) | GO:0006784
  • heme biosynthetic process (IEA) | GO:0006783
  • immunoglobulin heavy chain V-D-J recombination (IEA) | GO:0071707
  • microtubule depolymerization (IEA) | GO:0007019
  • mitochondrial membrane organization (IEA) | GO:0007006
  • negative regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolic process (IEA) | GO:1902642
  • negative regulation of complement-dependent cytotoxicity (IEA) | GO:1903660
  • negative regulation of epithelial cell-cell adhesion involved in epithelium migration (IEA) | GO:1903682
  • negative regulation of glycoprotein metabolic process (IEA) | GO:1903019
  • negative regulation of macrophage derived foam cell differentiation (IEA) | GO:0010745
  • negative regulation of PERK-mediated unfolded protein response (IEA) | GO:1903898
  • negative regulation of sprouting angiogenesis (IEA) | GO:1903671
  • negative regulation of stomatal opening (IEA) | GO:1902457
  • negative regulation of telomere single strand break repair (IEA) | GO:1903824
  • neutral lipid metabolic process (IEA) | GO:0006638
  • obsolete bent DNA binding (IEA) | GO:0006326
  • obsolete larval behavior (sensu Insecta) (IEA) | GO:0007627
  • obsolete MAPK cascade involved in ascospore formation (IEA) | GO:1903695
  • obsolete mRNA endonucleolytic cleavage involved in unfolded protein response (IEA) | GO:0070055
  • ommochrome biosynthetic process (IEA) | GO:0006727
  • phagocytosis (IEA) | GO:0006909
  • pigment accumulation in response to UV light (IEA) | GO:0043478
  • pigment accumulation in tissues in response to UV light (IEA) | GO:0043479
  • plant-type cell wall modification (IEA) | GO:0009827
  • positive regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolic process (IEA) | GO:1902643
  • positive regulation of macrophage derived foam cell differentiation (IEA) | GO:0010744
  • positive regulation of peroxisome proliferator activated receptor signaling pathway (IEA) | GO:0035360
  • positive regulation of response to water deprivation (IEA) | GO:1902584
  • positive regulation of wound healing, spreading of epidermal cells (IEA) | GO:1903691
  • propan-2-ol biosynthetic process (IEA) | GO:1902640
  • protein localization to old growing cell tip (IEA) | GO:1903858
  • regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate biosynthetic process (IEA) | GO:1902646
  • regulation of complement-dependent cytotoxicity (IEA) | GO:1903659
  • regulation of cytokinin dehydrogenase activity (IEA) | GO:1903856
  • regulation of glycoprotein metabolic process (IEA) | GO:1903018

Domains

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

No Data fetched for Homologs

General Information

No Data fetched for General Information

Associated Literature

  1. Ref:22052974: Klinge S, Voigts-Hoffmann F, Leibundgut M, Arpagaus S, Ban N (2011) Crystal structure of the eukaryotic 60S ribosomal subunit in complex with initiation factor 6. Science (New York, N.Y.) 334(6058):941-8

Sequences 

>TTHERM_00732640(coding)
ATGTTCGACAAGCTTGTAGTTATTGATGCTAAGGGTCACTTATTGGGTAGACTCGCTTCT
TACGTTGCCAAGGAACTTTTGAGTGGTCAAAGAATTGTTGTTGTTAGAACTGAAGCTATT
AACATCTCTGGCTCTCTCTTCAGAAACAGAGTTAAATTCTCCGAATTCCTTAACAAATGG
ATGAACCACAACCCCAGAAGAGGTGTTCAACATTTCAGAGCTCCCTCTAGAATTTTCTGG
AGAGCCGTCAGAGGTATGCTCCCTCATAAGACCCCCAAGGGTGCTGCTGCCTTAGAAAGA
CTAAAAATTTTCGAAGGTATCCCCACCCCCTACGACAGAGTTAAGAAGTAAGTCGTTGTC
GATGCCTTGAAGGTCTAAAGATTAAGAAACTCTAGACCCGTCTGCAAGTTGGGTGACTTG
AGTGCTTCCGTTGGTTGGGGCAAACAAACCCTCATCGAAAAGCTCGAAGAAAAGAGAAGA
GCTAGAGCTAAAACCTACCACGATAAGAAGGTTAAGTAAGCTGATGCCAGAAAGAAGGAA
CTCGCTGCTCCTGCTCTTAAGGCTATCAAGGATAAACTCGCCTAATTCGGTTACTGA



>TTHERM_00732640(gene)
AGGAAATTAATAAAGTAAAAAAAATAAAATTAAGAGAAGGATAAAAAATAAATTAAATAA
ATAAATAGAAATAATAAAGGAAAATGTTCGACAAGCTTGTAGTTATTGATGCTAAGGGTC
ACTTATTGGGTAGACTCGCTTCTTACGTTGCCAAGGAACTTTTGAGTGGTCAAAGAATTG
TTGTTGTTAGAACTGAAGCTATTAACATCTCTGGCTCTCTCTTCAGAAACAGAGTTAAAT
TCTCCGAATTCCTTAACAAATGGATGAACCACAACCCCAGAAGAGGTGTTCAACATTTCA
GAGCTCCCTCTAGAATTTTCTGGAGAGCCGTCAGAGGTATGCTCCCTCATAAGACCCCCA
AGGGTGCTGCTGCCTTAGAAAGACTAAAAATTTTCGAAGGTATCCCCACCCCCTACGACA
GAGTTAAGAAGTAAGTCGTTGTCGATGCCTTGAAGGTCTAAAGATTAAGAAACTCTAGAC
CCGTCTGCAAGTTGGGTGACTTGAGTGCTTCCGTTGGTTGGGGCAAACAAACCCTCATCG
AAAAGCTCGAAGAAAAGAGAAGAGCTAGAGCTAAAACCTACCACGATAAGAAGGTTAAGT
AAGCTGATGCCAGAAAGAAGGAACTCGCTGCTCCTGCTCTTAAGGCTATCAAGGATAAAC
TCGCCTAATTCGGTTACTGATCACCCTTTCTTACTCTAATATATACAACTATCGATTATT
ATATTAAATTTTTTTAATCTTTGAAGTAATAATAATATATATTTTTGCTTACCTAGTGCA
TAATAATATATTCTTTATTTAAACGCATATGTGAA



>TTHERM_00732640(protein)
MFDKLVVIDAKGHLLGRLASYVAKELLSGQRIVVVRTEAINISGSLFRNRVKFSEFLNKW
MNHNPRRGVQHFRAPSRIFWRAVRGMLPHKTPKGAAALERLKIFEGIPTPYDRVKKQVVV
DALKVQRLRNSRPVCKLGDLSASVGWGKQTLIEKLEEKRRARAKTYHDKKVKQADARKKE
LAAPALKAIKDKLAQFGY