Identifiers and Description

Gene Model Identifier

TTHERM_00736480

Standard Name

RPL5 (Ribosomal protein of the large subunit)

Aliases

PreTt25473 | 120.m00131

Description

RPL5 60S ribosomal protein L5; Ribosomal L18p/L5e family protein

Genome Browser (Macronucleus)

Full Screen View

No Genome Browser Data Present

Genome Browser (Micronucleus)

Full Screen View

No Genome Browser Data Present

External Links

• Uniprot
• Alphafold

Gene Ontology Annotations

Cellular Component

• intracellular anatomical structure (IEA) | GO:0005622
• ribosome (IEA) | GO:0005840

Molecular Function

• structural constituent of ribosome (IEA) | GO:0003735

Biological Process

• translation (IEA) | GO:0006412

Domains

• ( PF00861 ) Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
• ( PF02755 ) RPEL repeat

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

No results were calculated for this gene in GeneMania.

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source	Identifier	Score
Tetrahymena borealis	EI9_10631.1	9.997093137033517e-262
	Description: hypothetical protein (302 aa)
Tetrahymena borealis	EI9_18401.1	9.997093137033517e-262
	Description: hypothetical protein (1899 aa)
Oxytricha	Contig22366.0.g46	1.0001900614163146e-108
	Description: Ribosomal L18p/L5e family
WormBase	WBGene00004416	6.001435805040647e-94
	Description: locus:rpl-5 60S ribosomal protein L5 status:Confirmed UniProt:P49405 protein_id:CAA90251.1
WormBase	WBGene00003858	6.001435805040647e-94
	Description: locus:ogt-1 status:Confirmed UniProt:Q2L6Y4 protein_id:CCD61615.1
DictyBase	DDB_G0278539	2.0008312485874125e-83
	Description: rpl5 on chromosome: 3 position 1039561 to 1040650
SGD	YPL131W	2.0001503375893664e-79
	Description: RPL5 Protein component of the large (60S) ribosomal subunit with similarity to E. coli L18 and rat L5 ribosomal proteins; binds 5S rRNA and is required for 60S subunit assembly
Stentor Coeruleus	SteCoe_20741	1.2160992992528256e-37
	Description: None

General Information

No Data fetched for General Information

Associated Literature

1. Ref:22052974: Klinge S, Voigts-Hoffmann F, Leibundgut M, Arpagaus S, Ban N (2011) Crystal structure of the eukaryotic 60S ribosomal subunit in complex with initiation factor 6. Science (New York, N.Y.) 334(6058):941-8

Sequences

>TTHERM_00736480(coding)
ATGGGTTTCGTTAAAGTTCTCAAGACTAAGGCTTACTTCAAGAGATTCTAAACCAAGTAC
AGAAGAAGAAGAGAGGGTCTCACTGATTACTACGCCAGAAAGAGATTGATCATCCAAGAT
AAGGATAAATACAACACCCCCAAGTACAGATTAGTTGCTAGAGCCACCAACACCAGAATC
ATCGCCTAGATCGTCTACGCTACCCTCAAGTGCGACAGAGTCCTCTGTGCTGCTGACTCC
TACGAACTCAAGAGATTCGGAGTCTCCACTGGTTTGGCTTCCTACGCTGCTGCCTACGCC
ACTGGTCTCTTATTAGCCAGAAGATTGCTCAAGCAAATCGGTTTAGACACCGTTTATGCT
GGTCAAACTAAGGTTGATGGTGCCTACTTCAATGTCGATGAAGACCAAAAGGAAAAGAAG
CCCTTCAAGGCTATTTTGGATGCTGGTTTGGTCAGAACCACCACCGGTAACAGAGTCTTC
GGTGTCTTAAAGGGTGCTTGCGATGGTGGTATTAACATCCCCCACTCTGAAAGCAGATTC
CCCGGTTACGTCAGAGCTTCTGATGAAGGTGAATCCTCCAAGTACAAGCCTGAAGACCAC
AAGGCTAGAATCTTCGGTAAACACATCGATGCTTACATGAAACACTTAAAGGGACAATCC
AACGAAGCTTTCTAAAAGCAATTCTCCAAGTGGAGCAAGACCCTCGAAGCTGCTAAGGTT
GACTCCGTTGAAAAGCTCTTCACCAAGGTCCACGCTGAAATCAGAAAGAACCCCGAAAGA
GTTAAATCTACCAAGAAGAACGATAAGCCCAAGAGAGACCACAAGAAGTTCTACCCTACC
AAGCTTACCGCTGCCCAAAGAAAAGACAGAGTTAAAACTAAGTTCCAACTTGCTCTCTCT
TAATGA

>TTHERM_00736480(gene)
ATGGTAACTCATTTTTTCTGAAATTTACTATTATATATTTAATCTAATTCCAAAATGAAT
ACTAATCATTTTATTTTATCACTCATCAACAGGGTTTCGTTAAAGTTCTCAAGACTAAGG
CTTACTTCAAGAGATTCTAAACCAAGTACAGAAGAAGAAGAGGTAAACAGCTATATTATT
TCTTTGTATCATCTCGTCTTTTCTATTCTCGCTATTTAATCGTCTCAAACAGCATCCTTC
ATCATACAATCACTCATATCTGGTGCAAATCTCCTCAATATTTAATAATGAGAGCATATC
CTACGAATAAATCGTTGATTCGTTCATAGCAAGCTTCATAAAACATGCAAATACATATTA
TTTATTGCGATTGGTTTGGCATTAACAAAAATAATTTAGCAAGATATTTATTTATTTTAG
GACTATAAGCATAATGTTATTTCAATGGTTTTTTGCTAACTACTCAGCTTGATGAATATA
ATTTGTATTCAAAAGTCAAACATTTGCAATATTTCCAGCATCTTAGCTTGCTATCAAAGC
TTTCAAACCTAAAATTAGCCTATAAACAAACAATCCAAAATATAAAGTTTTAGACATAAA
GCAAAATAGTATGAACAGAAAAAGTTAATTCAGCTTCGGTTTTGTAATAGCGTTCTCTTT
AGCATATTGTTAGCTGCTTCAAGCATACTAATTTAATAAAATTCAATTAGACGCTTTTCC
AATATCAGCAAGGCAACTTATATGAAAATAGATACCTTGATAAGGTTAAACATAATTGCA
ACTAGGTTTAGATAGGAACAAACAAACTCAAATGATTATCTTGCTTCTAAAACCAACAAA
ATAATCAACATGCATAGAAATAGGCAGAAGCAGTTCAAAGCTCCTAAATTTGCTTCATTA
TCAAGATAAATCCAAACAACAAAAGAGAGTTAGCTAATTGACAGATAGATAAATAAATAA
ACATCATAATATCCTTTATAGATATTTTTGCAAAGCATTCAAATAAAACAAAATTATTGT
ATAAAACTATTAAGCAATTGAGTGAGTGAGTGATTGATTGATTGATTGAGTGAGTGATTA
TAATATTGATGAAATATTTTCTTTGGTTGAAGAAAATGATATTGAATTAAATAAATGGGA
GAAGAAAAGACAAATAAATAGATGAAAGAATGAATAAATTTAAATATAAAAAAAAAAAAA
GATTTTAAATATTAAATATTTTAATTTAAATAGAGGGTCTCACTGATTACTACGCCAGAA
AGAGATTGATCATCCAAGATAAGGATAAATACAACACCCCCAAGTACAGATTAGTTGCTA
GAGCCACCAACACCAGAATCATCGCCTAGATCGTCTACGCTACCCTCAAGTGCGACAGAG
TCCTCTGTGCTGCTGACTCCTACGAACTCAAGAGATTCGGAGTCTCCACTGGTTTGGCTT
CCTACGCTGCTGCCTACGCCACTGGTCTCTTATTAGCCAGAAGATTGCTCAAGCAAATCG
GTTTAGACACCGTTTATGCTGGTCAAACTAAGGTTGATGGTGCCTACTTCAATGTCGATG
AAGACCAAAAGGAAAAGAAGCCCTTCAAGGCTATTTTGGATGCTGGTTTGGTCAGAACCA
CCACCGGTAACAGAGTCTTCGGTGTCTTAAAGGGTGCTTGCGATGGTGGTATTAACATCC
CCCACTCTGAAAGCAGATTCCCCGGTTACGTCAGAGCTTCTGATGAAGGTGAATCCTCCA
AGTACAAGCCTGAAGACCACAAGGCTAGAATCTTCGGTAAACACATCGATGCTTACATGA
AACACTTAAAGGGACAATCCAACGAAGCTTTCTAAAAGCAATTCTCCAAGTGGAGCAAGA
CCCTCGAAGCTGCTAAGGTTGACTCCGTTGAAAAGCTCTTCACCAAGGTCCACGCTGAAA
TCAGAAAGAACCCCGAAAGAGTTAAATCTACCAAGAAGAACGATAAGCCCAAGAGAGACC
ACAAGAAGTTCTACCCTACCAAGCTTACCGCTGCCCAAAGAAAAGACAGAGTTAAAACTA
AGTTCCAACTTGCTCTCTCTTAATGA

>TTHERM_00736480(protein)
MGFVKVLKTKAYFKRFQTKYRRRREGLTDYYARKRLIIQDKDKYNTPKYRLVARATNTRI
IAQIVYATLKCDRVLCAADSYELKRFGVSTGLASYAAAYATGLLLARRLLKQIGLDTVYA
GQTKVDGAYFNVDEDQKEKKPFKAILDAGLVRTTTGNRVFGVLKGACDGGINIPHSESRF
PGYVRASDEGESSKYKPEDHKARIFGKHIDAYMKHLKGQSNEAFQKQFSKWSKTLEAAKV
DSVEKLFTKVHAEIRKNPERVKSTKKNDKPKRDHKKFYPTKLTAAQRKDRVKTKFQLALS
Q