Identifiers and Description

Gene Model Identifier

TTHERM_00835340

Standard Name

LSM7 (Lsm (Like Sm) protein 7)

Aliases

PreTt24549 | 145.m00116

Description

LSM7 U6 snRNA associated-like-Smprotein; Sm protein

Genome Browser (Macronucleus)

Full Screen View

No Genome Browser Data Present

Genome Browser (Micronucleus)

Full Screen View

No Genome Browser Data Present

External Links

• Uniprot
• Alphafold

Gene Ontology Annotations

Cellular Component

• nucleus (IEA) | GO:0005634
• sno(s)RNA-containing ribonucleoprotein complex (IEA) | GO:0005732

Biological Process

• mRNA processing (IEA) | GO:0006397

Domains

• ( PF01423 ) LSM domain

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

No results were calculated for this gene in GeneMania.

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source	Identifier	Score
Tetrahymena borealis	EI9_16808.1	4.000904604388404e-59
	Description: Sm protein (105 aa)
WormBase	WBGene00003081	7.002785992501305e-33
	Description: locus:lsm-7 status:Confirmed UniProt:Q23543 protein_id:CAA93428.1
DictyBase	DDB_G0289499	2.998800627344286e-26
	Description: lsm7 on chromosome: 5 position 2859869 to 2860286
Oxytricha	Contig18849.0.g107	3.999672240330216e-26
	Description: LSM domain
SGD	YNL147W	5.000468829272308e-18
	Description: LSM7 Lsm (Like Sm) protein; part of heteroheptameric complexes (Lsm2p-7p and either Lsm1p or 8p): cytoplasmic Lsm1p complex involved in mRNA decay; nuclear Lsm8p complex part of U6 snRNP and possibly involved in processing tRNA, snoRNA, and rRNA

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>TTHERM_00835340(coding)
ATGTCAGGTGGTTAAAAGTAGTAAAAAGAGTCGATCATTAATCTTTCTTAATATGTTGGA
AAAGATATTCGTGTTAAATTTTAGGGAGGCAGAGAAGTGACAGGTGTTTTAAAAAGTTTT
GATAATTAACTCAATATGATTTTAGATGATTGCGTTGAAACTATAAGAGATAAAAATGAT
CCTTATTTGATGACAGAACAAAAAAGAAAGTTGAATTTAGTAGTTGTTAGAGGAACTTTG
GTTTCTACCATATTCCCAATGAGCGGCACAGAAATAATTGAAAATCCTTTTGTAAACATG
GAAGAATAGTGA

>TTHERM_00835340(gene)
ATGTCAGGTGGTTAAAAGTAGTAAAAAGAGTCGATCATTAATCTTTCTTAATATGTTGGA
AAAGATATTCGTGTTAAATTTTAGGGAGGCAGAGAAGTGACAGGTGTTTTAAAAAGTTTT
GATAATTAACTCAATATGATTTTAGATGATTGCGTTGAAACTATAAGAGGTAATTTAAAT
TTTAAAATAGAATTTGCTGCAAAAAAATAGTTTTAAGGAGAAGCCTCATTTAATTGAAAT
ATTTTATTAAAATAGATAAAAATGATCCTTATTTGATGACAGAACAAAAAAGAAAGTTGA
ATTTAGTAGTTGTTAGAGGAACTTTGGTAAATTTAAATCTATTTAATAAATAAATTAAAT
AAATGAGTAAATAAATATAAATAAATTATTAAAATGAACAGGTTTCTACCATATTCCCAA
TGAGCGGCACAGAAATAATTGAAAATCCTTTTGTAAACATGGAAGAATAGTGA

>TTHERM_00835340(protein)
MSGGQKQQKESIINLSQYVGKDIRVKFQGGREVTGVLKSFDNQLNMILDDCVETIRDKND
PYLMTEQKRKLNLVVVRGTLVSTIFPMSGTEIIENPFVNMEEQ