Identifiers and Description

Gene Model Identifier

TTHERM_00857880

Standard Name

RRM58 (RNA recognition motif-containing protein 58)

Aliases

PreTt09052 | 152.m00072

Description

RRM58 polyadenylate-binding protein; polyadenylate-binding protein

Genome Browser (Macronucleus)

Full Screen View


Genome Browser (Micronucleus)

Full Screen View

External Links

Gene Ontology Annotations

No Data fetched for Gene Ontology Annotations

Domains

  • ( PF00076 ) RNA recognition motif. (a.k.a. RRM,
  • ( PF08777 ) RNA binding motif
  • ( TIGR01622 ) splicing factor, CC1-like family
  • ( TIGR01628 ) polyadenylate binding protein, human types
  • ( TIGR01659 ) sex-lethal family splicing factor
  • ( TIGR01661 ) ELAV/HuD family splicing factor

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source Identifier Score
Tetrahymena borealis EI9_07184.1 1.9998745702418095e-48
Description: hypothetical protein (1214 aa)
Oxytricha Contig1956.0.g14 2.0004286606204839e-16
Description: RNA recognition motif_ (a_k_a_ RRM, RBD, or RNP domain)
WormBase WBGene00004701 0.0000000029989608248573072
Description: locus:rsp-4 Probable splicing factor, arginine/serine-rich 4 status:Confirmed UniProt:Q09511 protein_id:CCD68735.1
SGD YGR159C 0.0000008998839737394744
Description: NSR1 Nucleolar protein that binds nuclear localization sequences, required for pre-rRNA processing and ribosome biogenesis
DictyBase DDB_G0277353 0.000004000864880866421
Description: DDB_G0277353 on chromosome: 2 position 7808700 to 7811174

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences 

>TTHERM_00857880(coding)
ATGTTTGTAGAAAGTGAAGTTTTTACTGAAAATACTTAATCAAACTCACAATTTATAGCA
AATAATTTCTAGTAAATGGTGAAAGATGAATCTAAAATTAGCAATATAAAAGATACTTAT
GTAAAAGAAAATGATATAAACTCATCAAGAATTAACGCTGATGAAGATAATAGATAATAG
TCTATGTCTTCTAAATTCTCCAATCGCAATACATCTGCTTCTTCAAGAAGATAATCTTCT
TAAGTAAGCGCTCCTAGGTCTTCTAGATCTTCTTCTTCTGGATCTTCCTGCTCTTCCTCA
TCATCATAATCTTCTTCATCATCATAAAGGTCTCGATCATCTTCTTCATCTTCCTCCTAA
ACATATCGCACATCAAAAATGAGTAAAAGCTCAAAGATTTAGGATAAAAGAGCAACTAGA
AATGAAAATGAGTCTTAAAATAGCAAATGCTTGTACATAGCGAATTTAAGTGAGAAAGTG
ACTGAATCAAATTTAAAGAAACTTTTTGAAGAGTATGGAGAAATAGATTATGTAAATATA
TGCTATAAACCTTACAGTTAGTAATAACAGGGTATTAAAATACCTGCTGGATATGCCTTT
ATAAAATATTACAAGGAGAAAGATGCTTAAAGAGCATTAAATCACCTCGATGAAACAAAT
TTAAAAGGAAAAAAAATAAAAATTGAATATGCAAAAAGAGAGAAGCCCAGATAGTCAAAG
GATGGACCATACCATAAAATTGGAAATGTTTATAATAAAAAATAATCAGATAATTAAACA
GAGTTAAATAAATGTGATAAGATGAGTAAAAAGGATGTTCAATATTTTTCGAATTATAAC
CCTTCTGAATAAAATAAGTATAAAAGTCAAAGGCACTACATAAAGGATAAATAATCATCC
CAAAATTTATTAAAGAAAACTAATTCTGAATTTGTTGATAATAGATAGAACCTGACGATG
GATTAATAAGATTGCTTTGCAAATTAAGATTCCTACAGAAATAACTAAAAAGCAAACACA
TAAGTTAAATCTAGAAGCCGCAGCAGAAGCAGAACTTTAAGTGATAAAGTTATTTTGATT
ATGGACTTCATGATATCTAAAAGCGATAATAAGAACTAACATTAAACAATCGATTAGCAT
ACTGCTACTGTTAAAGAAGAAGATCAAAAAGTGCTTGATGAAGCCACTCTCTAGCATATT
ATGAATAAAAATGCAAATTAATAATAAATAAGCTCAATTTATGAAAATCAATCTAAAAAT
ATACGCCAAAAAACTGTTTATTCTGAAAAAAGGTAGATGGATTAGGTTAACAAAGGAAGC
TGTCTCTATATTTCGAATTTAAGCCATAAAGTGACTGATTAGCAGCTAAAGAAGATCTTT
AGCACATATGGAAGAGTTGAATATGCAAATATTTGTTACGAGCCATATAGTTAGCAGTAA
AGAGGATAAAAAATCCCTAGAGGAATAGGATTTGTCAAATACGCTAGGAATTCAGATGCT
TTGAAAGCGATTGAAGAGCTTGATGGAAAAATGATAAAAAATAAAGAAATTAAAATAATG
CTTTCTAAAAGAGATGAGCCAAGAGTTTCGCACAAAGGACCCTACTTTGGCAAAAGCCCT
AAAAAAGATAAAAAAGACTCAGATAGCAAGAAAGAATCAAAAAGGATTTAAAAGTAATCT
TCTTATTAATCCCAAACTTCAGAAGAAAATAATTCGATTGAAAGACATAGATCTATTAGC
AGGGAATCATCTGAGTCTAATGGGGATTTGACTTTCTAATAAAAATAAAAAAACTAAGCT
AAAACACATTAAGGAATAATAGATTAAGAATAATTGAATCTGAAAAATAAACAAAAGCAT
CAAAGCGATAGTTAAAATATATTATATAATGGTAGATCTACTCGCCATTAAAATAATAAA
TAAAAAAATTAAAATGATGAAAAGGACGATTAACGCATCCATGAAGAGCTAAATAAATAG
GTTAACCACTTCCAAACTTCAATATAAAATGAAAAATAAATGAATGTGTAAAATAGATCT
AGATCAAGATCTAATGAAAACTACAAAGAAAAGTAGTATAAATCAAACCAAAAGTAAACA
AGGTATAATCGTTTTAAATAGCACGGATAAAGATCTTCATCTACTTCTAACAACACATCA
TAATCCTCTTCTTCTTCGCATTCATCGTCATCATCATCTTCTTCTCCCTCATCATAACAA
TCTAGTCCTAGTTCTTCACCTTCTTAATTTTCTCGTAAAAAAAAAAAGTAGAGTGTAAGA
AAGTATAAAAATGATCAATCTTCTTAAAACAATAACAAAAGATCCAAAAAAAACTCAAAA
CAATATCGATAAAGGTCTTCATCATCTTCTTCATAATCTAACAACTCTACCTAATAATAA
AATAAAAATTCAATTAGAATAAGAAATTGA


>TTHERM_00857880(gene)
ATGTTTGTAGAAAGTGAAGTTTTTACTGAAAATACTTAATCAAACTCACAATTTATAGCA
AATAATTTCTAGTAAATGGTGAAAGATGAATCTAAAATTAGCAATATAAAAGATACTTAT
GTAAAAGAAAATGATATAAACTCATCAAGAATTAACGCTGATGAAGATAATAGATAATAG
TCTATGTCTTCTAAATTCTCCAATCGCAATACATCTGCTTCTTCAAGAAGATAATCTTCT
TAAGTAAGCGCTCCTAGGTCTTCTAGATCTTCTTCTTCTGGATCTTCCTGCTCTTCCTCA
TCATCATAATCTTCTTCATCATCATAAAGGTCTCGATCATCTTCTTCATCTTCCTCCTAA
ACATATCGCACATCAAAAATGAGTAAAAGCTCAAAGATTTAGGATAAAAGAGCAACTAGA
AATGAAAATGAGTCTTAAAATAGTATAAATTTATTAAATTTAGTTTGATTATGCTATTAA
AAATCCATTAAAAATATCATCAAAAATATTCTCAAAAAGGCAAATGCTTGTACATAGCGA
ATTTAAGTGAGAAAGTGACTGAATCAAATTTAAAGAAACTTTTTGAAGAGTATGGAGAAA
TAGATTATGTAAATATATGCTATAAACCTTACAGTTAGTAATAACAGGGTATTAAAATAC
CTGCTGGATATGCCTTTATAAAATATTACAAGGAGAAAGATGCTTAAAGAGCATTAAATC
ACCTCGATGAAACAAATTTAAAAGGAAAAAAAATAAAAATTGAATATGCAAAAAGAGAGA
AGCCCAGATAGTCAAAGGATGGACCATACCATAAAATTGGAAATGTTTATAATAAAAAAT
AATCGTAAGAATATTAATTAAATATTTAATTTTAAAATAATTTATTATTGAACCAGTTAA
AAAAGGAAAAGAAGTTAATCATTAGAGCATATTAAAGATAAATTTTCTTAGAAAAATAAA
TATATTAGAGATAATTAAACAGAGTTAAATAAATGTGATAAGATGAGTAAAAAGGATGTT
CAATATTTTTCGAATTATAACCCTTCTGAATAAAATAAGTATAAAAGTCAAAGGCACTAC
ATAAAGGATAAATAATCATCCCAAAATTTATTAAAGAAAACTAATTCTGAATTTGTTGAT
AATAGATAGAACCTGACGATGGATTAATAAGATTGCTTTGCAAATTAAGATTCCTACAGA
AATAACTAAAAAGCAAACACATAAGTTAAATCTAGAAGCCGCAGCAGAAGCAGAAGTAAT
TCTATGAGGAATAAATACTCGTGAGAGCATAAAACTATTATAACATATTTTGTTTATTTT
ACTAATTTAAAAACAATATTCTACCTTTTTGTAAATGAAATTTTAAGAATGTCCTATTTT
AATAGCAGTAAAAGCATATTAAATAATCTTCACAAACAAAAACCCTCTTCTATCAAAGAA
AGATTGATAATTAATTAATTATAAAAACTAGAAATTATTTAGTCTTAAAACAATGTTTTC
TTGAGAAAAAAATTATAAATCTTAGGTGTAAAAAGACTTAAATAAAAATAAAATATTGAT
CTCCCATTTTTTTATTAAATTTATTAAAAAATTTACTAATTTACTCTATTTTATTTATCT
GGGACTCTATTTATTGCAGCTAGCTAGCTGAAAATTTAAATAATTTTGATCATAGATTAT
AAAGACTGATTTTGTAAATTAAATGAATTAGATTGATTATTAAAAACTTATATAGCTATG
ATGAAATATAAAATTTTTTAAATGACGAAAATTACGTGTAAAAAATATTATATTTTTTTG
AGTAATAATTGAAACATAATACATTTTTTTCAATTTTATAAATAGATCAATGAAAAAACA
CAGTTGTTAATGTGAAAAAGTCTAGTTTTGAATTTCAGGTAATTTAATAGAAGAATGTAT
TAAAATAGTTATTTAGTTTGTAAAAAATAGTTATTCTATTTTGAGACTTGTAAGCCTCAT
GCTATATTTATGAAGGAAAGGATATATGAAGCAAAAGAAAAATCTAAATAAATAAATACG
CATAAATTATAAGATTAATCAAAAAGGCAAGAAAAATAACATTTACTCTCAAACAAAGTC
TTTTAGCTAATAAAAAGATAATAATGTGCAAAAAAAAGTGATATTCTTTAATTATATTGC
ATATTTTATTAAAAGAATTAGAAGAACAAAATTTTTATAGCAGCTGGAGCTAATTCAAAT
TTTAGCTTTAAGTGATAAAGTTATTTTGATTATGGACTTCATGATATCTAAAAGCGATAA
TAAGAACTAACATTGTAAAATCATTTTTATAAATTCATTTTAGACTTTTATATTATTTGT
TGTTTCAAATTTAGAACAGCACTAATTTTGCAAGATAATTTAAAATTATCAATTTGTGCC
TTTAAAAAAGAAAAGTAGAAAGACGGAAATACTTTAATTTAAGCTTTGCCTATTAGATTT
CTCTTAAATTTTTTTTATATAAATAAGAAACAATCGATTAGCATACTGCTACTGTTAAAG
AAGAAGATCAAAAAGTGCTTGATGAAGCCACTCTCTAGCATATTATGAATAAAAATGCAA
ATTAATAATAAATAAGCTCAATTTATGAAAATCAATCTAAAAATATACGCCAAAAAACTG
TTTATTCTGAAAAAAGGTAGATGGATTAGGTTAACAAAGGTAGATTTCTTACAAATTTTC
ATATAAATTACCTTAAATTTACTCATAATTGCTTAATAATTAACAGGAAGCTGTCTCTAT
ATTTCGAATTTAAGCCATAAAGTGACTGATTAGCAGCTAAAGAAGATCTTTAGCACATAT
GGAAGAGTTGAATATGCAAATATTTGTTACGAGCCATATAGTTAGCAGTAAAGAGGATAA
AAAATCCCTAGAGGAATAGGATTTGTCAAATACGCTAGGAATTCAGATGCTTTGAAAGCG
ATTGAAGAGCTTGATGGAAAAATGATAAAAAATAAAGAAATTAAAATAATGCTTTCTAAA
AGAGATGAGCCAAGAGTTTCGCACAAAGGACCCTACTTTGGCAAAAGCCCTAAAAAGTAT
TAAATTTTTTCAATTAATTAAATAAATAAAATAAAAATAAGGTTAAATCATTGTTAAAAT
ATCATAGTTTAAAATAATTTTAAAATTAAAATAATACTTATAAAATTGTTTGAAATAATA
AAAAAACAAATATCTTATGACAAACCAAGCAAAAAATAATAATTCGCCAAAGTATTATAT
TTGTTTTGTTAAATGATTACTTCAATAATTATTAAGAAAATTAATTAATTTTTTTTAAAG
TCAAATAATGAACAAAAAATTAATTAAAAAATTTGAAAATAAATAAAAGAAAGCAAAAAT
CATCTTCTTTTGTTAGTTTTTCTTTAAAATTCACTATAATTAATTTAATTAACTAACTTG
TTATCAAAGCGCATTCTTTCTTTTTATAAACCAAAACTATAGCTTGATATTATTTTTAAT
ATTACTAATTTTAATTAAGAGATAAAAAAGACTCAGATAGCAAGAAAGAATCAAAAAGGA
TTTAAAAGTAATCTTCTTATTAATCCCAAACTTCAGAAGAAAATAATTCGATTGAAAGAC
ATAGATCTATTAGCAGGGAATCATCTGAGTCTAATGGGGATTTGACTTTCTAATAAAAAT
AAAAAAACTAAGCTAAAACACATTAAGGAATAATAGATTAAGAATAATTGAATCTGAAAA
ATAAACAAAAGCATCAAAGCGATAGTTAAAATATATTATATAATGGTAGATCTACTCGCC
ATTAAAATAATAAATAAAAAAATTAAAATGATGAAAAGGACGATTAACGCATCCATGAAG
AGCTAAATAAATAGGTTAACCACTTCCAAACTTCAATATAAAATGAAAAATAAATGAATG
TGTAAAATAGATCTAGATCAAGATCTAATGAAAACTACAAAGAAAAGTAGTATAAATCAA
ACCAAAAGTAAACAAGGTATAATCGTTTTAAATAGCACGGATAAAGATCTTCATCTACTT
CTAACAACACATCATAATCCTCTTCTTCTTCGCATTCATCGTCATCATCATCTTCTTCTC
CCTCATCATAACAATCTAGTCCTAGTTCTTCACCTTCTTAATTTTCTCGTAAAAAAAAAA
AGTAGAGTGTAAGAAAGTATAAAAATGATCAATCTTCTTAAAACAATAACAAAAGATCCA
AAAAAAACTCAAAACAATATCGATAAAGGTCTTCATCATCTTCTTCATAATCTAACAACT
CTACCTAATAATAAAATAAAAATTCAATTAGAATAAGAAATTGA


>TTHERM_00857880(protein)
MFVESEVFTENTQSNSQFIANNFQQMVKDESKISNIKDTYVKENDINSSRINADEDNRQQ
SMSSKFSNRNTSASSRRQSSQVSAPRSSRSSSSGSSCSSSSSQSSSSSQRSRSSSSSSSQ
TYRTSKMSKSSKIQDKRATRNENESQNSKCLYIANLSEKVTESNLKKLFEEYGEIDYVNI
CYKPYSQQQQGIKIPAGYAFIKYYKEKDAQRALNHLDETNLKGKKIKIEYAKREKPRQSK
DGPYHKIGNVYNKKQSDNQTELNKCDKMSKKDVQYFSNYNPSEQNKYKSQRHYIKDKQSS
QNLLKKTNSEFVDNRQNLTMDQQDCFANQDSYRNNQKANTQVKSRSRSRSRTLSDKVILI
MDFMISKSDNKNQHQTIDQHTATVKEEDQKVLDEATLQHIMNKNANQQQISSIYENQSKN
IRQKTVYSEKRQMDQVNKGSCLYISNLSHKVTDQQLKKIFSTYGRVEYANICYEPYSQQQ
RGQKIPRGIGFVKYARNSDALKAIEELDGKMIKNKEIKIMLSKRDEPRVSHKGPYFGKSP
KKDKKDSDSKKESKRIQKQSSYQSQTSEENNSIERHRSISRESSESNGDLTFQQKQKNQA
KTHQGIIDQEQLNLKNKQKHQSDSQNILYNGRSTRHQNNKQKNQNDEKDDQRIHEELNKQ
VNHFQTSIQNEKQMNVQNRSRSRSNENYKEKQYKSNQKQTRYNRFKQHGQRSSSTSNNTS
QSSSSSHSSSSSSSSPSSQQSSPSSSPSQFSRKKKKQSVRKYKNDQSSQNNNKRSKKNSK
QYRQRSSSSSSQSNNSTQQQNKNSIRIRN