Identifiers and Description

Gene Model Identifier

TTHERM_00898250

Standard Name

RRM52 (RNA recognition motif-containing protein 52)

Aliases

PreTt20530 | 160.m00066

Description

RRM52 RNA recognition motif 1 in vertebrate serine/arginine-rich splicing factor; RNA binding protein

Genome Browser (Macronucleus)

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No Genome Browser Data Present

Genome Browser (Micronucleus)

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No Genome Browser Data Present

Gene Ontology Annotations

No Data fetched for Gene Ontology Annotations

Domains

• ( PF00076 ) RNA recognition motif. (a.k.a. RRM,

Gene Expression Profile

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source	Identifier	Score
Tetrahymena borealis	EI9_41364.1	1.0004671766404936e-76
	Description: RNA binding protein (119 aa)
Oxytricha	Contig11357.0.g94	2.9994376937714457e-52
	Description: RNA recognition motif_ (a_k_a_ RRM, RBD, or RNP domain)
WormBase	WBGene00016808	5.997418848378574e-45
	Description: Pre-mRNA branch site p14-like protein status:Confirmed UniProt:Q8ITY4 protein_id:CCD65337.1
DictyBase	DDB_G0286297	2.0008536325002377e-42
	Description: DDB_G0286297 on chromosome: 4 position 4322636 to 4323120
Stentor Coeruleus	SteCoe_17406	2.8625185805493937e-20
	Description: None
SGD	YGL044C	0.0000000006000548789370351
	Description: RNA15 Cleavage and polyadenylation factor I (CF I) component involved in cleavage and polyadenylation of mRNA 3 ends; interacts with the A-rich polyadenylation signal in complex with Rna14p and Hrp1p; mutant displays reduced transcription elongation in the G-less-based run-on (GLRO) assay; required for gene looping

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>TTHERM_00898250(coding)
ATGAGCAATAAGATTGTTAAGTTACCCCCTGAGGTTAATAGAGTAGTTTATGTTAGAAAT
CTACCATATAAAATATCAGCAGAAGAATTATATGATGTTTTTGGAACTTATGGTCCAATT
AGATAAATAAGAAAGGGAGTTAGTGGTGATAAAAAAGGAACAGCATTTGTAGTTTATGAA
GATATTTTTGATGCAAAGACTGCAGTTGAACATTTAAATGGTTTTAATGTTGCAGGCAGA
TATTTAATTGTTTTATATTATCAACCTCATAAAATCAACAAAAAGACTGATTTACAAAAG
AAATAAGAAGAAGTTGATCGTTTAAAAGAAATAGCAAGCAAATAAACTTAATAGTGA

>TTHERM_00898250(gene)
ATGAGCAATAAGATTGTAAATATTAGCATTAAAAAACCAATTTTATATTCTAAAATATTT
TAATTCAAATAGGTTAAGTTACCCCCTGAGGTTAATAGAGTAGTTTATGTTAGAAATCTA
CCATATAAAATATCAGCAGAAGAATTATATGATGTTTTTGGAACTTATGGTCCAATTAGA
TAAATAAGAAAGTAAATAAATTATTTTTATTCAAATTGAAAATAGCTAATTATTTTATCA
ATATTCAATAGGGGAGTTAGTGGTGATAAAAAAGGAACAGCATTTGTAGTTTATGAAGAT
ATTTTTGATGCAAAGACTGCAGTTGAACATTTAAATGGTTTTAATGTTGCAGGCAGATAT
TTAATTGTTTTATATTATCAACCTCATAAAATCAACAAAAAGACTGATTTACAAAAGAAA
TAAGAAGAAGTTGATCGTTTAAAAGAAATAGCAAGCAAATAAACTTAATAGTGA

>TTHERM_00898250(protein)
MSNKIVKLPPEVNRVVYVRNLPYKISAEELYDVFGTYGPIRQIRKGVSGDKKGTAFVVYE
DIFDAKTAVEHLNGFNVAGRYLIVLYYQPHKINKKTDLQKKQEEVDRLKEIASKQTQQ