Identifiers and Description

Gene Model Identifier

TTHERM_00939110

Standard Name

RFC1 (Homolog of Replication factor C subunit 1)

Aliases

PreTt03760 | 170.m00089

Description

RFC1 BRCT domain protein; BRCA1 C Terminus (BRCT) domain; AAA+ ATpase with a BRCT domain at the N-terminus (Cryptosporidium parvum)

Genome Browser (Macronucleus)

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Genome Browser (Micronucleus)

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External Links

Gene Ontology Annotations

Cellular Component

Molecular Function

Biological Process

Domains

  • ( PF00004 ) ATPase family associated with various cellular activities (AAA)
  • ( PF00533 ) BRCA1 C Terminus (BRCT) domain
  • ( PF03047 ) COMC family
  • ( PF03215 ) Rad17 P-loop domain
  • ( PF04702 ) Vicilin N terminal region
  • ( PF08243 ) SPT2 chromatin protein
  • ( PF08519 ) Replication factor RFC1 C terminal domain
  • ( TIGR02397 ) DNA polymerase III, subunit gamma

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source Identifier Score
Tetrahymena borealis EI9_19334.1 9.997093137033517e-262
Description: BRCT domain-containing protein (1154 aa)
Tetrahymena borealis EI9_13491.1 9.997093137033517e-262
Description: hypothetical protein (333 aa)
Oxytricha Contig2682.0.g45 1.9999788875029746e-125
Description: Replication factor RFC1 C terminal domain
WormBase WBGene00004337 1.999618694399617e-70
Description: locus:rfc-1 status:Confirmed UniProt:Q18841 protein_id:CAA99812.1
SGD YOR217W 7.000846320060671e-65
Description: RFC1 Subunit of heteropentameric Replication factor C (RF-C), which is a DNA binding protein and ATPase that acts as a clamp loader of the proliferating cell nuclear antigen (PCNA) processivity factor for DNA polymerases delta and epsilon
DictyBase DDB_G0285961 2.998990600740728e-62
Description: rfc1 on chromosome: 4 position 3845828 to 3850119
Stentor Coeruleus SteCoe_1680 7.667648073722e-53
Description: None

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences 

>TTHERM_00939110(coding)
ATGAAAAAGAATAACTAGTCAAATAGTTTATTGAAATATTTTAGTAAATAAGATACCAAA
ACTGTTAATAATTCGTAAAATTCTTCTAAAGACAAAGACAAAGAAAAAGATTCTAAAGAA
AAAACAAAAGAATCTTCATCTAAAACTTAATACAAATAAACTAAGGAAATAAAGCATGAA
GAACCTAAAAAATAAGAACAAAATAAGAAGCAAAATGAATAAAAGGAAGAAAAAGAAAAA
AGAAATTTTAGTTAAGATATAAAAAATACTCGATCAACTCCCATTAAAAAAGTTTAAGAG
TAGAAAAAAGAAGAAATAAAATCTTCTAAAAATAAAATGAATGTAGAGAATTCAGGAACT
GAAGAATTATCTGCCACTGAAAGTCTAACAGAACCTGCATTAAGCGAAAATGAGGAAAAA
AATAAATCTTCCAATCAAAATAAAGGGAGAAATGTTTCAAGTGATAATAAATAGTAATAA
GCGAAAGACGTAAAAATGAATTAAAGTTAGACAAGATCAAATGATAATAAAAAAGTAGAT
CCCAAGTAATCAAGTAAAAAGCCATAAAAGAAAAATGAGACTGATGACGATGATTACGGT
ATTAATGATGAAGAAGAGGACTTACCCAAAAATAGCAAACAAAAAAAATTAGTATAAGGG
AGCCAAAAAAAAATAAAATGA


>TTHERM_00939110(gene)
ATGAAAAAGAATAACTAGTCAAATAGTTTATTGAAATATTTTAGTAAATAAGATACCAAA
ACTGTTAATAATTCGTAAAATTCTTCTAAAGACAAAGACAAAGAAAAAGATTCTAAAGAA
AAAACAAAAGAATCTTCATCTAAAACTTAATACAAATAAAGTAAATTATTTTTTTAATGA
TGATATTCTTCTACTATTTTGAAATAAAGCTAAGGAAATAAAGCATGAAGAACCTAAAAA
ATAAGAACAAAATAAGAAGCAAAATGAATAAAAGGAAGAAAAAGAAAAAAGAAATTTTAG
TTAAGATATAAAAAATACTCGATCAACTCCCATTAAAAAAGTTTAAGAGTAGAAAAAAGA
AGAAATAAAATCTTCTAAAAATAAAATGAATGTAGAGAATTCAGGAACTGAAGAATTATC
TGCCACTGAAAGTCTAACAGAACCTGCATTAAGCGAAAATGAGGAAAAAAATAAATCTTC
CAATCAAAATAAAGGGAGAAATGTTTCAAGTGATAATAAATAGTAATAAGCGAAAGACGT
AAAAATGAATTAAAGTTAGACAAGATCAAATGATAATAAAAAAGTAGATCCCAAGTAATC
AAGTAAAAAGCCATAAAAGAAAAATGAGACTGATGACGATGATTACGGTATTAATGATGA
AGAAGAGGACTTACCCAAAAATAGCAAACAAAAAAAATTAGTATAAGGGAGCCAAAAAAA
AATAAAATGA


>TTHERM_00939110(protein)
MKKNNQSNSLLKYFSKQDTKTVNNSQNSSKDKDKEKDSKEKTKESSSKTQYKQTKEIKHE
EPKKQEQNKKQNEQKEEKEKRNFSQDIKNTRSTPIKKVQEQKKEEIKSSKNKMNVENSGT
EELSATESLTEPALSENEEKNKSSNQNKGRNVSSDNKQQQAKDVKMNQSQTRSNDNKKVD
PKQSSKKPQKKNETDDDDYGINDEEEDLPKNSKQKKLVQGSQKKIK