Identifiers and Description

Gene Model Identifier

TTHERM_00941540

Standard Name

RAB11B (RAB GTPase 11B)

Aliases

PreTt25160 | 171.m00077

Description

RAB11B small GTPase family Rab protein; Rab II family protein; small monomeric GTPase that regulates membrane fusion and fission events

Genome Browser (Macronucleus)

Full Screen View

No Genome Browser Data Present

Genome Browser (Micronucleus)

Full Screen View

No Genome Browser Data Present

External Links

• Uniprot
• Alphafold

Gene Ontology Annotations

Cellular Component

• intracellular anatomical structure (IEA) | GO:0005622

Molecular Function

• GTP binding (IEA) | GO:0005525

Biological Process

• small GTPase-mediated signal transduction (IEA) | GO:0007264

Domains

• ( PF00025 ) ADP-ribosylation factor family
• ( PF00071 ) Ras family
• ( PF01926 ) 50S ribosome-binding GTPase
• ( PF08477 ) Ras of Complex, Roc, domain of DAPkinase
• ( TIGR00231 ) small GTP-binding protein domain

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

No results were calculated for this gene in GeneMania.

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source	Identifier	Score
Tetrahymena borealis	EI9_19607.1	4.0007306071632746e-129
	Description: Ras-like protein Rab11A (213 aa)
WormBase	WBGene00004274	5.0014751778710277e-85
	Description: locus:rab-11.1 status:Confirmed UniProt:O01803 protein_id:CCD71701.1
WormBase	WBGene00000998	5.0014751778710277e-85
	Description: locus:dig-1 Mesocentin status:Confirmed UniProt:Q09165 protein_id:CCD72779.1
DictyBase	DDB_G0269238	9.999776257620412e-83
	Description: rab11A on chromosome: 1 position 4269122 to 4270264
Oxytricha	Contig16926.0.g71	4.000392704867155e-81
	Description: Ras family
SGD	YER031C	6.00277790667473e-79
	Description: YPT31 Rab family GTPase, very similar to Ypt32p; involved in the exocytic pathway; mediates intra-Golgi traffic or the budding of post-Golgi vesicles from the trans-Golgi
Stentor Coeruleus	SteCoe_17980	6.639677199580735e-36
	Description: None

General Information

No Data fetched for General Information

Associated Literature

1. Ref:16933976: Eisen JA, Coyne RS, Wu M, Wu D, Thiagarajan M, Wortman JR, Badger JH, Ren Q, Amedeo P, Jones KM, Tallon LJ, Delcher AL, Salzberg SL, Silva JC, Haas BJ, Majoros WH, Farzad M, Carlton JM, Smith RK, Garg J, Pearlman RE, Karrer KM, Sun L, Manning G, Elde NC, Turkewitz AP, Asai DJ, Wilkes DE, Wang Y, Cai H, Collins K, Stewart BA, Lee SR, Wilamowska K, Weinberg Z, Ruzzo WL, Wloga D, Gaertig J, Frankel J, Tsao CC, Gorovsky MA, Keeling PJ, Waller RF, Patron NJ, Cherry JM, Stover NA,

Sequences

>TTHERM_00941540(coding)
ATGGCATCAAAGAACGAAGACGAATACGATTTCCTTTTTAAGATTGTTCTAATAGGTGAT
TCTGGCGTAGGAAAAACCAACTTGCTATCAAGATTTACTAAAAATGAATTCAATATGGAT
TCAAAGCCAACAATCGGTGTAGAATTTGCCACTAAAACAGTTATTACAGAAAATAAATAC
ATAAAAGCACAAATTTGGGACACTGCAGGTTAAGAAAAATACAGAGCTATTACTAACGCA
TATTATAGAGGAGCTGTTGGTGCTCTCACCCTTTATGATATTACAAAGCAATAGACATTT
GACAATGTAAAAAAGTGGTTACATGAACTCAGAGAATATGCCGATGCTAATATTATTTGT
ATGCTTATTGGTAATAAATGCGATTTGTAAGAAATGAGATAAGTAAAGACAGAAGATGCT
GCTAAATTTGCAGAAGAAAATAACCTTGCATTTATGGAAACATCTGCTGCCTAAGCTATA
AATGTAGATTAAGCCTTTTAAAAACTCATCACAGAAATATATAATAATTTGAAGACAAGA
CCTAATGAAGAAAAAAAAAAGGCATAACCATAATAAAATGGAAATAATATAATTAAAGAT
TTTAAGCAACCCACCTAAGCAGAAAAAGAAAAAAAATGTTGTTGA

>TTHERM_00941540(gene)
ATGGCATCAAAGAACGAAGACGAATACGATTTCCTTTTTAAGATTGTTCTAATAGGTAAT
CTTTATTCAAGTTATTTTAAAAAAGGATCTATTATTCAGCATACCTATCGGAATTTTTTG
ATTGAATATATTTATCAATCTATCTACTCTTTATACTAATTCATATTTATAGTCCTTTTC
GCAAACATAAATCATAAGAATTAATTTAATTCAAAAATTGCTAATCTTTTTTTCTTGTAT
TCATTTTAGGTGATTCTGGCGTAGGAAAAACCAACTTGCTATCAAGATTTACTAAAAATG
AATTCAATATGGATTCAAAGCCAACAATCGGTGTAGAATTTGCCACTAAAACAGTTATTA
CAGAAAATAAATACATAAAAGCACAAATTTGGGACACTGCAGGTTAAGAAAAATACAGAG
CTATTACTAACGCATATTATAGAGGAGCTGTTGGTGCTCTCACCCTTTATGATATTACAA
AGCAATAGACATTTGACAATGTAAAAAAGTGGTTACATGAACTCAGAGAATATGCCGATG
CTAATATTATTTGTATGCTTATTGGTAATAAATGCGATTTGTAAGAAATGAGATAAGTAA
AGACAGAAGATGCTGCTAAATTTGCAGAAGAAAATAACCTTGCATTTATGGAAACATCTG
CTGCCTAAGCTATAAATGTAGATTAAGCCTTTTAAAAACTCATCACAGGTAAATATAAAC
TATTCTTTTAAATTCTGAGAGGCTTTATTTTGAAAAACCCATTCAAAAATTTCCTTCAAC
CAAGGCTAAACCTACCAAAAATGAATTTTATTTTAATTTTAAAATATCACTTTTGAAATA
AAGCCGCATCAAGCTAAGCTTTGAAACAATTGAATTCATAAATATTTTTTTCCTTATAAA
ATAAAAACTAAAATGATTTCTTACTATAAAATAGAAATATATAATAATTTGAAGACAAGA
CCTAATGAAGAAAAAAAAAAGGCATAACCATAATAAAATGGAAATAATATAATTAAAGAT
TTTAAGCAACCCACCTAAGCAGAAAAAGAAAAAAAATGTTGTTGA

>TTHERM_00941540(protein)
MASKNEDEYDFLFKIVLIGDSGVGKTNLLSRFTKNEFNMDSKPTIGVEFATKTVITENKY
IKAQIWDTAGQEKYRAITNAYYRGAVGALTLYDITKQQTFDNVKKWLHELREYADANIIC
MLIGNKCDLQEMRQVKTEDAAKFAEENNLAFMETSAAQAINVDQAFQKLITEIYNNLKTR
PNEEKKKAQPQQNGNNIIKDFKQPTQAEKEKKCC