Identifiers and Description

Gene Model Identifier

TTHERM_00954180

Standard Name

SEH1 (nucleoporin Seh1)

Aliases

PreTt04994 | 176.m00067 | Seh1

Description

SEH1 nucleoporin putative; Nucleoporin common to both MAC and MIC NPCs; Sec13/Seh1 family

Genome Browser (Macronucleus)

Full Screen View

No Genome Browser Data Present

Genome Browser (Micronucleus)

Full Screen View

No Genome Browser Data Present

External Links

• Uniprot
• Alphafold

Gene Ontology Annotations

Cellular Component

• nuclear pore (ISS) | GO:0005643

Biological Process

• transport (ISS) | GO:0006810

Domains

• ( PF00400 ) WD domain, G-beta repeat

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

No results were calculated for this gene in GeneMania.

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

No Data fetched for Homologs

General Information

No Data fetched for General Information

Associated Literature

1. Ref:25788697: Iwamoto M, Koujin T, Osakada H, Mori C, Kojidani T, Matsuda A, Asakawa H, Hiraoka Y, Haraguchi T (2015) Biased assembly of the nuclear pore complex is required for somatic and germline nuclear differentiation in Tetrahymena. Journal of cell science 128(9):1812-23
2. Ref:19375312: Iwamoto M, Mori C, Kojidani T, Bunai F, Hori T, Fukagawa T, Hiraoka Y, Haraguchi T (2009) Two distinct repeat sequences of Nup98 nucleoporins characterize dual nuclei in the binucleated ciliate tetrahymena. Current biology : CB 19(10):843-7

Sequences

>TTHERM_00954180(coding)
ATGAATTAGGAAGGATTTCAAGCAATCAACACTTTTCATTAAGATATAATACACGATATA
TCATTTGACTGGTATGGTTAAAGACTAGTCACTTGTTCATCTGACAGAAATGTAAAAATT
TGGCATAAAAACTAATCAGGAAAATGGGATTTATACCACTCAATCACTAATCAAGAAGGT
CCAGTTAGGAAAGTAAAATGGGCTCATCCTTAATTTGGAACTATTTTGGCTGCATGCTCA
ATGGATCGCTCTATTCATATTTATTAAGAATATAAAGATATTACTTCAATACAAAAGGAT
CCCAATGAATAATAATTATAAAAATAATGGAAACCCATCAAAATCTATAACGACAAAGAA
GTTATTGAAGACATGAAATTTGCTCCTATACATGTTGGTTTAATATTAGCTGTTGCAAGA
GCTGATGGAAGGATTAGTATTTTCCAATTTAAAGATCTTTTGAACTTACAAATTCATGAG
CAAATCTCGAATATCTCTGTCTCTCCTTTAGGAATTAATAGTATTTCTTGGAACAAAAAT
AGATTTGATAAGAAGCATATGATTGCAGTCGGATGTAAAGATAGAGATACATCTCAAACT
AAAAATTAAAATGGAATTAACGGCGTCAATTAAAAGTATATCGATGAAGAAATCAAATCC
GGTTAATCCTTCAAAATTATTGTCTTCAACAGTCTTTAAACTGTAAATGCTTAAGATCAC
TATCAAATGAAATTTGAATTCCAAGAAAGCAATGCTTAATAACTTATGCACACCTAAAAT
GTAAGTGATGTATCCTGGAGTTTAATAAATGGAAGATCTTTTCATTTAATTGCAACATGT
GGTAAAGAAGGAGCCAGAATTTGGTACATGAAACAATTATCTACAAACTAAAATGTCATA
TAAGTTATTAAAGTTATTGACTTGTTTGATCAAAATTACAGAGAAAGCATTGAAGTCCAA
AAGATATCTTGGAATATTATGGCTTCACTAGTAGCAACCTCTGACAGCAACAACGAAATT
AAAATCTTTAAATGTGTCGGAATGGGTAAATGGGAAAAAATTAAGAGTATTAAAGAAACT
TAGGATTCAGAATAATGA

>TTHERM_00954180(gene)
AATTTGATATATAAATATTTAATAAATAATAATAATAGCAAATAAACATACAAAGCAATT
AATTAATTAATTTTTGTATTTAAAAATTAAAAAATATAATAGCGCAAAGTTAATAAATAT
ATTAATAGATAGATATTTTACTTAATTTTCATTTTAAAAGCTAGTCAGTCTCACTATAAA
AAATGAATTAGGAAGGATTTCAAGCAATCAACACTTTTCATTAAGATATAATACACGATA
TATCATTTGACTGGTATGGTTAAAGACTAGTCACTTGTTCATCTGACAGAAATGTAAAAA
TTTGGCATAAAAACTAATCAGGAAAATGGGATTTATACCACTCAATCACTAATCAAGAAG
GTCCAGTTAGGAAAGTAAAATGGGCTCATCCTTAATTTGGAACTATTTTGGCTGCATGCT
CAATGGATCGCTCTATTCATATTTATTAAGAATATAAAGATATTACTTCAATACAAAAGG
ATCCCAATGAATAATAATTATAAAAATAATGGAAACCCATCAAAATCTATAACGACAAAG
AAGTTATTGAAGACATGAAATTTGCTCCTATACATGTTGGTTTAATATTAGCTGTTGCAA
GAGCTGATGGAAGGATTAGTATTTTCCAATTTAAAGATCTTTTGAACTTACAAATTCATG
AGCAAATCTCGAATATCTCTGTCTCTCCTTTAGGAATTAATAGTATTTCTTGGAACAAAA
ATAGATTTGATAAGAAGCATATGATTGCAGTCGGATGTAAAGATAGAGATACATCTCAAA
CTAAAAATTAAAATGGAATTAACGGCGTCAATTAAAAGTATATCGATGAAGAAATCAAAT
CCGGTTAATCCTTCAAAATTATTGTCTTCAACAGTCTTTAAACTGTAAATGCTTAAGATC
ACTATCAAATGAAATTTGAATTCCAAGAAAGCAATGCTTAATAACTTATGCACACCTAAA
ATGTAAGTGATGTATCCTGGAGTTTAATAAATGGAAGATCTTTTCATTTAATTGCAACAT
GTGGTAAAGAAGGAGCCAGAATTTGGTACATGAAACAATTATCTACAAACTAAAATGTCA
TATAAGTTATTAAAGTTATTGACTTGTTTGATCAAAATTACAGAGAAAGCATTGAAGTCC
AAAAGATATCTTGGAATATTATGGCTTCACTAGTAGCAACCTCTGACAGCAACAACGAAA
TTAAAATCTTTAAATGTGTCGGAATGGGTAAATGGGAAAAAATTAAGAGTATTAAAGAAA
CTTAGGATTCAGAATAATGAAAAAACAAACTATTCTTTTTATTTTCAAATTTGTTATTAA
CACCTATTTATTATGTTAAATATAATCAACAAATTTTCTAAATTATTAAAA

>TTHERM_00954180(protein)
MNQEGFQAINTFHQDIIHDISFDWYGQRLVTCSSDRNVKIWHKNQSGKWDLYHSITNQEG
PVRKVKWAHPQFGTILAACSMDRSIHIYQEYKDITSIQKDPNEQQLQKQWKPIKIYNDKE
VIEDMKFAPIHVGLILAVARADGRISIFQFKDLLNLQIHEQISNISVSPLGINSISWNKN
RFDKKHMIAVGCKDRDTSQTKNQNGINGVNQKYIDEEIKSGQSFKIIVFNSLQTVNAQDH
YQMKFEFQESNAQQLMHTQNVSDVSWSLINGRSFHLIATCGKEGARIWYMKQLSTNQNVI
QVIKVIDLFDQNYRESIEVQKISWNIMASLVATSDSNNEIKIFKCVGMGKWEKIKSIKET
QDSEQ