Identifiers and Description

Gene Model Identifier

TTHERM_00957580

Standard Name

RAB17A (RAB GTPase 17A)

Aliases

PreTt21654 | 177.m00058

Description

RAB17A small guanosine triphosphatase family Ras family protein; Rab V family protein; small monomeric GTPase that regulates membrane fusion and fission events

Genome Browser (Macronucleus)

Full Screen View

No Genome Browser Data Present

Genome Browser (Micronucleus)

Full Screen View

No Genome Browser Data Present

External Links

• Uniprot
• Alphafold

Gene Ontology Annotations

Cellular Component

• intracellular anatomical structure (IEA) | GO:0005622

Molecular Function

• GTP binding (IEA) | GO:0005525

Biological Process

• small GTPase-mediated signal transduction (IEA) | GO:0007264

Domains

• ( PF00025 ) ADP-ribosylation factor family
• ( PF00071 ) Ras family
• ( PF01926 ) 50S ribosome-binding GTPase
• ( PF08477 ) Ras of Complex, Roc, domain of DAPkinase
• ( TIGR00231 ) small GTP-binding protein domain
• ( TIGR02528 ) ethanolamine utilization protein, EutP

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

No results were calculated for this gene in GeneMania.

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source	Identifier	Score
Tetrahymena borealis	EI9_14072.1	9.999664388307901e-124
	Description: Ras family protein (199 aa)
Oxytricha	Contig22448.0.g39	1.0000633497921574e-36
	Description: Ras family
SGD	YOR089C	3.00033207980219e-32
	Description: VPS21 Rab family GTPase required for endocytic transport and for sorting of vacuolar hydrolases; localized in endocytic intermediates; detected in mitochondria; geranylgeranylation required for membrane association; mammalian Rab5 homolog
DictyBase	DDB_G0289827	3.999374135750469e-31
	Description: rab18 on chromosome: 5 position 3292859 to 3293559
WormBase	WBGene00004286	3.0010664139725277e-29
	Description: locus:rab-39 status:Partially_confirmed UniProt:Q18969 protein_id:CAA87774.2
Stentor Coeruleus	SteCoe_9987	2.1151310375910805e-19
	Description: None

General Information

No Data fetched for General Information

Associated Literature

1. Ref:16933976: Eisen JA, Coyne RS, Wu M, Wu D, Thiagarajan M, Wortman JR, Badger JH, Ren Q, Amedeo P, Jones KM, Tallon LJ, Delcher AL, Salzberg SL, Silva JC, Haas BJ, Majoros WH, Farzad M, Carlton JM, Smith RK, Garg J, Pearlman RE, Karrer KM, Sun L, Manning G, Elde NC, Turkewitz AP, Asai DJ, Wilkes DE, Wang Y, Cai H, Collins K, Stewart BA, Lee SR, Wilamowska K, Weinberg Z, Ruzzo WL, Wloga D, Gaertig J, Frankel J, Tsao CC, Gorovsky MA, Keeling PJ, Waller RF, Patron NJ, Cherry JM, Stover NA,

Sequences

>TTHERM_00957580(coding)
ATGTGTTTCGGATCCAGCTCTAAGAAATAGTAAAGCAAACCCAAGCTTTTAAAGCCCAAG
CAAAGTTAGTACAAAACTAAGCTCATTCTTTTAGGTGACATGAACGTAGGCAAAACTTCA
ATCTGCGAGTATTACAAGAAGAACGTGCCTGCAAAGAACTTGCCAAATACAATTGGTGTC
ACATATTTCGAGTTCGACATCAAACTAGAAAATGGCATTAACGTTCACTTAGATATTTGG
GATACAGCAGGATAAGAAATTTATTAGTCACTACTAAAGATATACTATCAAGATGCTAAC
ATAGTTTTTTTAGTTTTTGATGTGAGTGCAAGATAGACTCTTGAACGTGTTGAGTACTGG
ATTAGCGAACTCAAAGAGCAAGTAGATGATAAAAACCTAAAGTTGGTGTTAATAGGTAAC
AAATGCGACATAGATGCAGATAAGAGGTAAATCAGTCTTGAGCAAGGTCAAGATTTTGCT
AGAAATAAAAACATTCCTTACTTTGAAACTAGTGCAATCACTGGAGAAGGAATAGTTGAA
GTATTCCGCTAAACAGTAAAGGACTATGTGTAATATAAGACAAACGGAGGAAAATGA

>TTHERM_00957580(gene)
ATGTGTTTCGGATCCAGCTCTAAGAAATAGTAAAGCAAACCCAAGCTTTTAAAGCCCAAG
CAAAGTTAGTACAAAACTAAGCTCATTCTTTTAGGTGACATGAACGTAGGCAAAACTTCA
ATCTGCGAGTATTACAAGAAGAACGTGCCTGCAAAGAACTTGCCAAATACAATTGGTGTC
ACATATTTCGAGTTCGACATCAAACTAGAAAATGGCATTAACGTTCACTTAGATATTTGG
GATACAGCAGGATAAGAAATTTATTAGTAAGCCTTTATTTTTTTAGCAATAAGAAGATTC
TTCCCATTTGAATTCTCATTTGACTCGTTCCAATTGAGTTCTGAGTTCTTTCGTTTTTTT
AATATTTTTGTTAACTTTCTTAGAGATTGTCCAGCTAGCTATTCATTCATTTGCATAATA
AATGTTATTAAAGCCAAAAAATAAAATAAAAGCAAAGATAAGAAAAGAAGAACTTGATTT
GGGCAGATTAAATATGTGTTGAATTTATAATGAATTAAATTAAGGTATTTTATTTTGTAA
TATCAATGAATAGGTCACTACTAAAGATATACTATCAAGATGCTAACATAGTTTTTTTAG
TTTTTGATGTGAGTGCAAGATAGACTCTTGAACGTGTTGAGTACTGGATTAGCGAACTCA
AAGAGCAAGTAGATGATAAAAACCTAAAGTTGGTGTTAATAGGTAACAAATGCGACATAG
ATGCAGATAAGAGGTAAATCAGTCTTGAGCAAGGTCAAGATTTTGCTAGAAATAAAAACA
TTCCTTACTTTGAAACTAGTGCAATCACTGGAGAAGGAATAGTTGAAGTATTCCGCTAAA
CAGTAAAGGACTATGTGTAATATAAGACAAACGGAGGAAAATGA

>TTHERM_00957580(protein)
MCFGSSSKKQQSKPKLLKPKQSQYKTKLILLGDMNVGKTSICEYYKKNVPAKNLPNTIGV
TYFEFDIKLENGINVHLDIWDTAGQEIYQSLLKIYYQDANIVFLVFDVSARQTLERVEYW
ISELKEQVDDKNLKLVLIGNKCDIDADKRQISLEQGQDFARNKNIPYFETSAITGEGIVE
VFRQTVKDYVQYKTNGGK