Identifiers and Description

Gene Model Identifier

TTHERM_00989490

Standard Name

VPS42 (Vacuolar Protein Sorting 4-2)

Aliases

PreTt07839 | 185.m00060 | VPS4B

Description

VPS42 AAA-type ATPase; ATPase, AAA family protein; associated with membrane vesicle trafficking; putative function in programmed nuclear death; Microtubule-severing AAA ATPase

Genome Browser (Macronucleus)

Full Screen View

No Genome Browser Data Present

Genome Browser (Micronucleus)

Full Screen View

No Genome Browser Data Present

External Links

• Uniprot
• Alphafold

Gene Ontology Annotations

Cellular Component

• cytoplasmic vesicle (IDA) | GO:0031410
• macronucleus (IDA) | GO:0031039
• vacuole (IDA) | GO:0005773

Domains

• ( PF00004 ) ATPase family associated with various cellular activities (AAA)
• ( PF09336 ) Vps4 C terminal oligomerisation domain
• ( PF17862 ) AAA+ lid domain

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

No results were calculated for this gene in GeneMania.

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

No Data fetched for Homologs

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>TTHERM_00989490(coding)
ATGAGCAATAACCCTATGATGTAATTTAGAGACATCGCTCTCTAAAAAATTACTCAAGGT
ATTAACATCTTTAATACCAAGAAGGATAACATTAATGAAAGAGATTAAGGTTATAGGTTG
ATGGTTTCTGGTCTTGAAGACTTAATCAAGTATAGAAAGCAAGAAACAAATGTTGATATT
TAAAATATTTTAAAGCCAAAGATAGATGAATATTTAAAGCAAGCAGCTGCCATGAAAGCT
GAAATTTCTGCCTAATAACAGAACATTAATCAATAGATTCAAAAGCAATCTTAATTTAGC
TATCAAGCAAACAATTAAAATTTGAATAATATTAACACTAATATGAATAATAATAATAAT
CAAAATTAATATAAGCCTCCAGTTAACAACAACAACAACAACAATAATAGCAATAACACC
AATAACAATAATGGTGGAAATAACTAAAACAATAACTAAGGAAAAAGTTAAATCAAGGAA
GGTGATAAAGATAATGCTAAGTTTGAACAAGCATTAGGTGAAGCAATTGTTACTGAAAAG
CCAAATGTTCACTGGTCTGATGTTGCTGGTTTAGAAAATGCTAAGAAAGCACTTAATGAA
GCAGTTATCCTACCCATCAGATTCCCTCATATATTCTAAGGTATGATCAAGCCTTGGAGA
GGTATTTTGTTATATGGACCTCCAGGTACTGGTAAAACATTCTTGGCTAAGGCTTGTGCA
ACAGAATGTGATGCTACCTTCTTCTCTATTTCCTCCTCTGATTTAATTTCTAAGTGGGTT
GGTGAATCTGAAAAGTTAATTAAGACTTTGTTTAAAATGGCCAGAGAGAAAAAACCTTCT
ATTATATTTATTGACGAAATAGATTCAATGACTGGAAATAGATCTGAAGGTGAGAATGAA
GCATCCAGAAGAGTCAAAACTGAATTTTTAGTTTAAATGCAAGGTGTTGGCAATGATGAC
ACTGGTGTTCTTGTCCTTGGTGCTACAAACGTTCCTTGGGGTTTAGATCCTGCTATTAGA
AGAAGATTTGAAAAAAGAATTATGATTCCTTTACCAGAAAAGGAAGCTAGATTCTAATTG
ATTGACAATCTCTTGAATAAAACTCCCAACTGCATTACATAAGAAGAAAGATTATACATT
GCAGAAAGAACTGAAGGTTTTTCAGGTTCTGATATATCTATTTTAGTTAGAGAAGCTTCA
TATGAGCCTCTGAGAATAGCATAAAGAGCCACTAAATTCAAAAAGATTTAAGACAAAGAT
GGCTAACCTAAGTATGTTGCTTGTGCTCCTAGTGATCCCTAAGGTGAATCAAAAGTATTA
ATGGATATATAAGGTAGTATGTTAAAATTGTAAGATGTCAGTATAGATCACTTCGAATTA
GCCTTGTAATCTTGTAAACCCTCAGTCTCTGAAAAAGATATAGAGAGACAAATTGAATTC
ACTAAAGAATTCGGCCAAGATGGTTGA

>TTHERM_00989490(gene)
ATTTATTGTAAGAATATTAAAGTTTAATCTAAAAGATAATAAATAATAAAGAAGAAGTAG
TTAATTATTCAACAAGCATTTTCTTCTAAAGTTATAAAACATACTAAACAAAGATATTGA
ATTTCAAACTCAAGCAAAAGTTAATTTATGAGCAATAACCCTATGATGTAATTTAGAGAC
ATCGCTCTCTAAAAAATTACTCAAGGTATTAACATCTTTAATACCAAGAAGGATAACATT
AATGAAAGAGATTAAGGTTATAGGTTGATGGTTTCTGGTCTTGAAGACTTAATCAAGTAT
AGAAAGCAAGAAACAAATGTTGATATTTAAAATATTTTAAAGCCAAAGATAGATGAATAT
TTAAAGCAAGCAGCTGCCATGAAAGCTGAAATTTCTGCCTAATAACAGAACATTAATCAA
TAGATTCAAAAGCAATCTTAATTTAGCTATCAAGCAAACAATTAAAATTTGAATAATATT
AACACTAATATGAATAATAATAATAATCAAAATTAATATAAGCCTCCAGTTAACAACAAC
AACAACAACAATAATAGCAATAACACCAATAACAATAATGGTGGAAATAACTAAAACAAT
AACTAAGGAAAAAGTTAAATCAAGGAAGGTGATAAAGATAATGCTAAGTTTGAACAAGCA
TTAGGTGAAGCAATTGTTACTGAAAAGCCAAATGTTCACTGGTCTGATGTTGCTGGTTTA
GAAAATGCTAAGAAAGCACTTAATGAAGCAGTTATCCTACCCATCAGATTCCCTCATATA
TTCTAAGGTATGATCAAGCCTTGGAGAGGTATTTTGTTATATGGACCTCCAGGTACTGGT
AAAACATTCTTGGCTAAGGCTTGTGCAACAGAATGTGATGCTACCTTCTTCTCTATTTCC
TCCTCTGATTTAATTTCTAAGTGGGTTGGTGAATCTGAAAAGTTAATTAAGACTTTGTTT
AAAATGGCCAGAGAGAAAAAACCTTCTATTATATTTATTGACGAAATAGATTCAATGACT
GGAAATAGATCTGAAGGTGAGAATGAAGCATCCAGAAGAGTCAAAACTGAATTTTTAGTT
TAAATGCAAGGTGTTGGCAATGATGACACTGGTGTTCTTGTCCTTGGTGCTACAAACGTT
CCTTGGGGTTTAGATCCTGCTATTAGAAGAAGATTTGAAAAAAGAATTATGATTCCTTTA
CCAGAAAAGGAAGCTAGATTCTAATTGATTGACAATCTCTTGAATAAAACTCCCAACTGC
ATTACATAAGAAGAAAGATTATACATTGCAGAAAGAACTGAAGGTTTTTCAGGTTCTGAT
ATATCTATTTTAGTTAGAGAAGCTTCATATGAGCCTCTGAGAATAGCATAAAGAGCCACT
AAATTCAAAAAGATTTAAGACAAAGATGGCTAACCTAAGTATGTTGCTTGTGCTCCTAGT
GATCCCTAAGGTGAATCAAAAGTATTAATGGATATATAAGGTAGTATGTTAAAATTGTAA
GATGTCAGTATAGATCACTTCGAATTAGCCTTGTAATCTTGTAAACCCTCAGTCTCTGAA
AAAGATATAGAGAGACAAATTGAATTCACTAAAGAATTCGGCCAAGATGGTTGAATAATA
AAATAAATTTTTGAATCAATAAAAAAGAGCTAGCTAAATAAATATAAATATTTTATTATT
ATTATTATCATAAATTGCTATTAAATTTGTTATAAAAATTGAATGTATTAAATTATTATT
AAAATATTAATTAATTAATTAATTAAATAAATAAAATGTTAAATTATTTTGAAACACAAT
TTTTAAAACAAAAAAATATTTATTTTTTGATACTGTTGTTGTAGTTTTTGTAGTTGTTTT
AAATTGTTATTTTTATTTTATTTATCTATTTAACTTTAAAGAAAA

>TTHERM_00989490(protein)
MSNNPMMQFRDIALQKITQGINIFNTKKDNINERDQGYRLMVSGLEDLIKYRKQETNVDI
QNILKPKIDEYLKQAAAMKAEISAQQQNINQQIQKQSQFSYQANNQNLNNINTNMNNNNN
QNQYKPPVNNNNNNNNSNNTNNNNGGNNQNNNQGKSQIKEGDKDNAKFEQALGEAIVTEK
PNVHWSDVAGLENAKKALNEAVILPIRFPHIFQGMIKPWRGILLYGPPGTGKTFLAKACA
TECDATFFSISSSDLISKWVGESEKLIKTLFKMAREKKPSIIFIDEIDSMTGNRSEGENE
ASRRVKTEFLVQMQGVGNDDTGVLVLGATNVPWGLDPAIRRRFEKRIMIPLPEKEARFQL
IDNLLNKTPNCITQEERLYIAERTEGFSGSDISILVREASYEPLRIAQRATKFKKIQDKD
GQPKYVACAPSDPQGESKVLMDIQGSMLKLQDVSIDHFELALQSCKPSVSEKDIERQIEF
TKEFGQDG