Identifiers and Description

Gene Model Identifier

TTHERM_00992760

Standard Name

RPS20 (Ribosomal Protein of the Small subunit 20)

Aliases

PreTt18338 | 186.m00054

Description

RPS20 40S ribosomal protein S20; Homolog of yeast RPS20- human RPS20- bacterial RPS10

Genome Browser (Macronucleus)

Full Screen View

No Genome Browser Data Present

Genome Browser (Micronucleus)

Full Screen View

No Genome Browser Data Present

Gene Ontology Annotations

Molecular Function

• rhamnulokinase activity (IEA) | GO:0008993

Biological Process

• asparagine metabolic process (IEA) | GO:0006528
• negative regulation of biosynthetic process (IEA) | GO:0009890
• pyrimidine ribonucleotide catabolic process (IEA) | GO:0009222

Domains

• ( PF00338 ) ribosomal protein S10p/S20e
• ( TIGR01046 ) ribosomal protein S10
• ( TIGR01049 ) ribosomal protein S10

Gene Expression Profile

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source	Identifier	Score
Tetrahymena borealis	EI9_04375.1	7.99824663097029e-79
	Description: ribosomal protein S10 containing protein (121 aa)
Oxytricha	Contig381.1.g57	1.0000633497921574e-36
	Description: Ribosomal protein S10p/S20e
WormBase	WBGene00004489	2.0003218023735366e-33
	Description: locus:rps-20 status:Confirmed UniProt:Q8WQA8 protein_id:CAD21665.1
DictyBase	DDB_G0278429	4.999723464643358e-28
	Description: rps20 on chromosome: 3 position 871775 to 872149
SGD	YHL015W	1.9993007828132465e-27
	Description: RPS20 Protein component of the small (40S) ribosomal subunit; overproduction suppresses mutations affecting RNA polymerase III-dependent transcription; has similarity to E. coli S10 and rat S20 ribosomal proteins
Stentor Coeruleus	SteCoe_32941	6.305116760146989e-16
	Description: None

General Information

No Data fetched for General Information

Associated Literature

1. Ref:21205638: Rabl J, Leibundgut M, Ataide SF, Haag A, Ban N (2011) Crystal structure of the eukaryotic 40S ribosomal subunit in complex with initiation factor 1. Science (New York, N.Y.) 331(6018):730-6

Sequences

>TTHERM_00992760(coding)
ATGAAGACAGAAAAAGAAGAAAAGATAATGAAATTAACAAAAGGTAAATTAAGCTAAAAA
AGAAAAGAAAAAATAGGCAGAAGCTAAATTAAAAAAGAAAAAGAAAAAATTAAATTAATA
AAAGACAAAATCTAAAAAATTAATATAAAGATGGACGCTACTAAGGAAACCAAGAAGGGA
GAAGAAGAAGTTAAGAAGGTTAGAGTTAGAATCACCTTGACTTGCAAGAACTTAAAGTCT
GTTGAAAAGGCCACCTCTGAAATCGTCTCCAGAGCCAAGAAGACTGAATAAGTCGAAGTT
AAGGGACCCGTCAGAATGCCCACTAAGACTCTCGTCATCACCGTCAGAAAGTCTCCTTGT
GGTGAAGGTTCTAAGACCTGGGACAGATTCGAAATGAGAATCTACAAGAGAATTATTGAT
CTTACTTGCAACGTTCCTGATGTTAAGACCATCACCAACTTCAGAATCGACCCCGGTGTT
GAAATCGAACTTACCATGACTGCCGACTAATGA

>TTHERM_00992760(gene)
ATGAAGACAGAAAAAGAAGAAAAGATAATGAAATTAACAAAAGGTAAATTAAGCTAAAAA
AGAAAAGAAAAAATAGGCAGAAGCTAAATTAAAAAAGAAAAAGAAAAAATTAAATTAATA
AAAGACAAAATCTAAAAAATTAATATAAAGATGGACGCTACTAAGGAAACCAAGAAGGGA
GAAGAAGAAGTTAAGAAGGTTAGAGTTAGAATCACCTTGACTTGCAAGAACTTAAAGTCT
GTTGAAAAGGCCACCTCTGAAATCGTCTCCAGAGCCAAGAAGACTGAATAAGTCGAAGTT
AAGGGACCCGTCAGAATGCCCACTAAGACTCTCGTCATCACCGTCAGAAAGTCTCCTTGT
GGTGAAGGTTCTAAGACCTGGGACAGATTCGAAATGAGAATCTACAAGAGAATTATTGAT
CTTACTTGCAACGTTCCTGATGTTAAGACCATCACCAACTTCAGAATCGACCCCGGTGTT
GAAATCGAACTTACCATGACTGCCGACTAATGA

>TTHERM_00992760(protein)
MKTEKEEKIMKLTKGKLSQKRKEKIGRSQIKKEKEKIKLIKDKIQKINIKMDATKETKKG
EEEVKKVRVRITLTCKNLKSVEKATSEIVSRAKKTEQVEVKGPVRMPTKTLVITVRKSPC
GEGSKTWDRFEMRIYKRIIDLTCNVPDVKTITNFRIDPGVEIELTMTADQ