Identifiers and Description

Gene Model Identifier

TTHERM_01016100

Standard Name

RPA12 (RNA polymerase I subunit 12)

Aliases

PreTt02644 | 198.m00064 | 3746.m00328

Description

RPA12 DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase I subunit

Genome Browser (Macronucleus)

Full Screen View

No Genome Browser Data Present

Genome Browser (Micronucleus)

Full Screen View

No Genome Browser Data Present

External Links

• Uniprot
• Alphafold

Gene Ontology Annotations

Molecular Function

• nucleic acid binding (IEA) | GO:0003676
• obsolete transcription regulator activity (IEA) | GO:0030528
• zinc ion binding (IEA) | GO:0008270

Biological Process

• regulation of transcription (IEA) | GO:0045449

Domains

No Data fetched for Domains

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

No results were calculated for this gene in GeneMania.

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source	Identifier	Score
Tetrahymena borealis	EI9_20171.1	2.0008734984431652e-95
	Description: transcription factor S-II (TFIIS) (137 aa)
DictyBase	DDB_G0278263	9.997019043202629e-21
	Description: rpa12 on chromosome: 3 position 579706 to 580766
WormBase	WBGene00009142	9.997019043202629e-21
	Description: status:Confirmed UniProt:Q93592 protein_id:CAB01700.1
SGD	YJR063W	7.997402223525235e-19
	Description: RPA12 RNA polymerase I subunit A12.2; contains two zinc binding domains, and the N terminal domain is responsible for anchoring to the RNA pol I complex
Oxytricha	Contig1475.1.g54	0.00000000000001000191320216021
	Description: Transcription factor S-II (TFIIS)
WormBase	WBGene00007616	0.000000000003001226732525078
	Description: locus:rpoa-12 DNA-directed RNA polymerase subunit status:Confirmed UniProt:O17587 protein_id:CAB02739.1

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>TTHERM_01016100(coding)
ATGGAAATAGATATCAAAAATTTAAATACTGCCAGTGAATTCTGCCCCTAGTGCGGTAAC
ATGATAGAAATGCCTCTTTATTCTGATAAAGTAGAATGTTCAAAGTGTGAATTCTTATGT
TCAGTCCTAGAATATAAGTGCGCTCCTATTGTTTCTAGAATTGAATTTAACTAGAAAAAG
TAATGGCTTGAGTAATATAGAGCCTCATAAAACAAAAAAATACATGGTATAGAAGAAGAA
GATTTGGAAGACAAGCACAAACACAAAAAGGCAACTTTAAAGCAAGAATGTCCTGATTGC
GGTCATGATACTCTTTACTTCTGGACAGTATAAACTCGTTCTGCTGATGAAGGTTCAACA
GTTTTCTACGAATGCTAAGATTGCAAGTTTAAGTTCACTGCAAACAACTGA

>TTHERM_01016100(gene)
ATGGAAATAGATATCAAAAATTTAAATACTGCCAGTGAATTCTGCCCCTAGTGCGGTAAC
ATGATAGAAATGCCTCTTTATTCTGATAAAGTAGAATGTTCAAAGTGTGAATTCTTATGT
TCAGTCCTAGAATATAAGTGCGCTCCTATTGTTTCTAGAATTGAATTTAACTAGAAAAAG
TAATGGCTTGAGTAATATAGAGCCTCATAAAACAAAAAAATACATGGTATAGAAGAAGAA
GATTTGGAAGACAAGCACAAACACAAAAAGGCAACTTTAAAGCAAGAATGTCCTGATTGC
GGTCATGATACTCTTTACTTCTGGACAGTATAAACTCGTTCTGCTGATGAAGGTTCAACA
GTTTTCTACGAATGCTAAGATTGCAAGTTTAAGTTCACTGCAAACAACTGA

>TTHERM_01016100(protein)
MEIDIKNLNTASEFCPQCGNMIEMPLYSDKVECSKCEFLCSVLEYKCAPIVSRIEFNQKK
QWLEQYRASQNKKIHGIEEEDLEDKHKHKKATLKQECPDCGHDTLYFWTVQTRSADEGST
VFYECQDCKFKFTANN