Identifiers and Description

Gene Model Identifier

TTHERM_01041920

Standard Name

RAB58 (RAB GTPase 58)

Aliases

PreTt01808 | 207.m00052

Description

RAB58 small guanosine triphosphatase family Ras family protein; Novel Rab family protein; small monomeric GTPase that regulates membrane fusion and fission events

Genome Browser (Macronucleus)

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Genome Browser (Micronucleus)

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External Links

Gene Ontology Annotations

Cellular Component

Molecular Function

Biological Process

Domains

  • ( PF00009 ) Elongation factor Tu GTP binding domain
  • ( PF00025 ) ADP-ribosylation factor family
  • ( PF00071 ) Ras family
  • ( PF01926 ) 50S ribosome-binding GTPase
  • ( PF08477 ) Ras of Complex, Roc, domain of DAPkinase
  • ( TIGR00073 ) hydrogenase accessory protein HypB
  • ( TIGR00231 ) small GTP-binding protein domain

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source Identifier Score
Tetrahymena borealis EI9_01158.1 3.999751664085691e-132
Description: Ras family protein (219 aa)
Oxytricha Contig15751.0.0.g87 1.0002546821282671e-50
Description: Ras family
WormBase WBGene00004266 6.001950283815408e-48
Description: locus:rab-1 status:Confirmed UniProt:Q9UAQ6 protein_id:CCD67094.1
DictyBase DDB_G0277867 5.000307300873256e-47
Description: rab1B on chromosome: 3 position 743092 to 744234
SGD YFL038C 5.002382393859839e-46
Description: YPT1 Rab family GTPase, involved in the ER-to-Golgi step of the secretory pathway; complex formation with the Rab escort protein Mrs6p is required for prenylation of Ypt1p by protein geranylgeranyltransferase type II (Bet2p-Bet4p)
Stentor Coeruleus SteCoe_36857 3.873997628687187e-21
Description: None

General Information

No Data fetched for General Information

Associated Literature

  1. Ref:16933976: Eisen JA, Coyne RS, Wu M, Wu D, Thiagarajan M, Wortman JR, Badger JH, Ren Q, Amedeo P, Jones KM, Tallon LJ, Delcher AL, Salzberg SL, Silva JC, Haas BJ, Majoros WH, Farzad M, Carlton JM, Smith RK, Garg J, Pearlman RE, Karrer KM, Sun L, Manning G, Elde NC, Turkewitz AP, Asai DJ, Wilkes DE, Wang Y, Cai H, Collins K, Stewart BA, Lee SR, Wilamowska K, Weinberg Z, Ruzzo WL, Wloga D, Gaertig J, Frankel J, Tsao CC, Gorovsky MA, Keeling PJ, Waller RF, Patron NJ, Cherry JM, Stover NA,

Sequences 

>TTHERM_01041920(coding)
ATGAACGGCGGCGCTAGTGACGGTATTGCTAAAGTTAAAATCCTAACATTAGGTGAATCA
GGTGTAGGAAAATCTTCGTTGTTACTTAGATACAAAGACGACAAATTCGCAGGAAACTTC
GTTACAACTCTTGGAGTTGAATATAAATAAAAGCAGATTCAAATTGAAAATATTCCTCTT
ACAGTCTAAGTTTGGGATACTGCTGGTTAAGAACGTTTTAAGACAATAACTCCAAATTAC
TACAGGTCAGTCGACGGTGCTCTTCTTGTTTTTGATATTTCAGAGTTAGAAACCTTCGAC
AAAATCGAATACTGGATCTAAGATCTACAGAAAGATGCTGACCTCACAAAAGTAATTATG
GTTTTAGTAGGCAATAAGAGTGATTTAGAAGAAAAAAGAAAAGTAGATTTTTAGACTGCC
CAAAAAAAGGCTTAGGAATATTAAATAGAATACATAGAAACTTCAGCCAAAACCAATTCA
AATGTTGATCAAGTTTTTGAAATGATTGTTAGAAAAGTTATAGATAAAAAAGGCGGCATT
GAAAAATTTAAAGCTCAATATTAAGAATAAATCGCATAAAACCTTAACTTAAAGAAAGCT
AACACTTCCAATGGTGCTTCTGGATCCAATAAAAACAAATAAAACAACAACAATGGTGGC
TGTTGTTGA


>TTHERM_01041920(gene)
ATGAACGGCGGCGCTAGTGACGGTATTGCTAAAGTTAAAATCCTAACATTAGGTGAATCA
GGTGTAGGAAAATCTTCGTTGTTACTTAGATACAAAGACGACAAATTCGCAGGAAACTTC
GTTACAACTCTTGGAGTTGAATATAAATAAAAGCAGATTCAAATTGAAAATATTCCTCTT
ACAGTCTAAGTTTGGGATACTGCTGGTTAAGAACGTTTTAAGACAATAACTCCAAATTAC
TACAGGTCAGTCGACGGTGCTCTTCTTGTTTTTGATATTTCAGAGTTAGAAACCTTCGAC
AAAATCGAATACTGGATCTAAGATCTACAGAAAGATGCTGACCTCACAAAAGTAATTATG
GTTTTAGTAGGCAATAAGAGTGATTTAGAAGAAAAAAGAAAAGTAGATTTTTAGACTGCC
CAAAAAAAGGCTTAGGAATATTAAATAGAATACATAGAAACTTCAGCCAAAACCAATTCA
AATGTTGATCAAGTTTTTGAAATGATTGTTAGAAAAGTTATAGATAAAAAAGGCGGCATT
GAAAAATTTAAAGCTCAATATTAAGAATAAATCGCATAAAACCTTAACTTAAAGAAAGCT
AACACTTCCAATGGTGCTTCTGGATCCAATAAAAACAAATAAAACAACAACAATGGTGGC
TGTTGTTGA


>TTHERM_01041920(protein)
MNGGASDGIAKVKILTLGESGVGKSSLLLRYKDDKFAGNFVTTLGVEYKQKQIQIENIPL
TVQVWDTAGQERFKTITPNYYRSVDGALLVFDISELETFDKIEYWIQDLQKDADLTKVIM
VLVGNKSDLEEKRKVDFQTAQKKAQEYQIEYIETSAKTNSNVDQVFEMIVRKVIDKKGGI
EKFKAQYQEQIAQNLNLKKANTSNGASGSNKNKQNNNNGGCC