Identifiers and Description

Gene Model Identifier

TTHERM_01050590

Standard Name

RRP40 (exosome component RRP40)

Aliases

PreTt27802 | 212.m00060

Description

RRP40 exosome complex exonuclease RRP40 putative; component of the exosome exonuclease complex

Genome Browser (Macronucleus)

Full Screen View

No Genome Browser Data Present

Genome Browser (Micronucleus)

Full Screen View

No Genome Browser Data Present

External Links

• Uniprot
• Alphafold

Gene Ontology Annotations

No Data fetched for Gene Ontology Annotations

Domains

No Data fetched for Domains

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

No results were calculated for this gene in GeneMania.

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source	Identifier	Score
Tetrahymena borealis	EI9_01462.1	1.0001999920370885e-161
	Description: hypothetical protein (249 aa)
DictyBase	DDB_G0276783	2.998577119979921e-31
	Description: DDB_G0276783 on chromosome: 2 position 7291532 to 7292461
Oxytricha	Contig20442.0.g90	1.000382677035467e-28
	Description: Tht1-like nuclear fusion protein
SGD	YOL142W	3.0000451088882257e-25
	Description: RRP40 Exosome non-catalytic core component; involved in 3-5 RNA processing and degradation in both the nucleus and the cytoplasm; predicted to contain both S1 and KH RNA binding domains; has similarity to human hRrp40p (EXOSC3)
WormBase	WBGene00010325	1.9994498063102785e-22
	Description: locus:exos-3 status:Confirmed UniProt:Q93830 protein_id:CAB01875.1
Stentor Coeruleus	SteCoe_24647	0.0000000000006914400106940203
	Description: None

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>TTHERM_01050590(coding)
ATGGAAATAGAAAAATAGTAATAGCCTGCTTTGAATATAGTTTTACCAGGAGAGTAAATA
GATTTGAGCTAGCTTACAGGATAGCTTTAAATCGATGAAAAATCGTTTACATTGACCACT
GATAATTAATTATACTCAAATAAATCAGGTGTTTTAGTTGATACCTAGCTAAAAGATGGG
TCCTGTGGTTTAACAGTCAAAGCTTACGCTCAAAAATATTATGCAGAAGTTGATGATTAT
GTTATTGGAGTAATTAAGGGTAGAGTATAAGAATATTATTTGGTTGATATTGGAGCTTAA
GAAGATGCATTATTATCTTTTTATGGCTTTGAAGGTGCCACTAAAAAGAATAGACCAAAT
TTAAGAGATGGATCTTTGATATTTTGCAGAGTTACTGAAGCAAATAAATATATGAAAATT
AAAGTTGATTGTATTCATCCTAAAATTAAAAAGTAGTGGATGACTGGAGAATCATTTTTT
GGATAGTTAAAAGACGGTATGGTTTCTAATATCTCAATTGAATATGCAAGGAGTATAATA
GGATAAGGAGACTTCGTATTTAGAGCATTTAAAAAATACATTAAATCTTTTGAGACAGCA
ATAGGTTCAAACGGTAAAGTTTGGATCAAAACACTCTAACCATAAAATACAATTTTGATC
CTTAACGTGCTTAATAAATGTGAGAATATGTCTATCGAATAAATTAAAGTTTATGTTGAT
TAAATCTCTCCTTTGCTTGTAAAAGAATGA

>TTHERM_01050590(gene)
ATGGAAATAGAAAAATAGTAATAGCCTGCTTTGAATATAGTTTTACCAGGAGAGTAAATA
GATTTGAGCTAGCTTACAGGATAGCTTTAAATCGATGAAAAATCGTTTACATTGACCACT
GATAATTAATTATACTCAAATAAATCAGGTGTTTTAGTTGATACCTAGCTAAAAGATGGG
TCCTGTGGTTTAACAGTCAAAGCTTACGCTCAAAAATATTATGCAGAAGTTGATGATTAT
GTTATTGGAGTAATTAAGGGTAGAGTATAAGAATATTATTTGGTTGATATTGGAGCTTAA
GAAGATGCATTATTATCTTTTTATGGCTTTGAAGGTGCCACTAAAAAGAATAGACCAAAT
TTAAGAGATGGATCTTTGATATTTTGCAGAGTTACTGAAGCAAATAAATATATGAAAATT
AAAGTTGATTGTATTCATCCTAAAATTAAAAAGTAGTGGATGACTGGAGAATCATTTTTT
GGATAGTTAAAAGACGGTATGGTTTCTAATATCTCAATTGAATATGCAAGGAGTATAATA
GGATAAGGAGACTTCGTATTTAGAGCATTTAAAAAATACATTAAATCTTTTGAGACAGCA
ATAGGTTCAAACGGTAAAGTTTGGATCAAAACACTCTAACCATAAAATACAATTTTGATC
CTTAACGTGCTTAATAAATGTGAGAATATGTCTATCGAATAAATTAAAGTTTATGTTGAT
TAAATCTCTCCTTTGCTTGTAAAAGAATGA

>TTHERM_01050590(protein)
MEIEKQQQPALNIVLPGEQIDLSQLTGQLQIDEKSFTLTTDNQLYSNKSGVLVDTQLKDG
SCGLTVKAYAQKYYAEVDDYVIGVIKGRVQEYYLVDIGAQEDALLSFYGFEGATKKNRPN
LRDGSLIFCRVTEANKYMKIKVDCIHPKIKKQWMTGESFFGQLKDGMVSNISIEYARSII
GQGDFVFRAFKKYIKSFETAIGSNGKVWIKTLQPQNTILILNVLNKCENMSIEQIKVYVD
QISPLLVKE