Identifiers and Description

Gene Model Identifier

TTHERM_01079210

Standard Name

RAB6B

Aliases

PreTt17436 | 221.m00056 | 3832.m00157

Description

RAB6B Rab-family small GTPase; Rab VI family protein; small monomeric GTPase that regulates membrane fusion and fission events

Genome Browser (Macronucleus)

Full Screen View

No Genome Browser Data Present

Genome Browser (Micronucleus)

Full Screen View

No Genome Browser Data Present

External Links

• Uniprot
• Alphafold

Gene Ontology Annotations

Cellular Component

• intracellular anatomical structure (IEA) | GO:0005622

Molecular Function

• GTP binding (IEA) | GO:0005525

Biological Process

• small GTPase-mediated signal transduction (IEA) | GO:0007264

Domains

• ( PF00025 ) ADP-ribosylation factor family
• ( PF00071 ) Ras family
• ( PF00350 ) Dynamin family
• ( PF01926 ) GTPase of unknown function
• ( PF08477 ) Miro-like protein
• ( TIGR00231 ) small GTP-binding protein domain
• ( TIGR00650 ) GTP-binding conserved hypothetical protein
• ( TIGR02528 ) ethanolamine utilization protein, EutP

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

No results were calculated for this gene in GeneMania.

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source	Identifier	Score
Tetrahymena borealis	EI9_20320.1	5.997411300273806e-139
	Description: Ras family protein (226 aa)
DictyBase	DDB_G0268068	4.000308233752481e-69
	Description: rab6 on chromosome: 1 position 1398472 to 1399280
WormBase	WBGene00004269	4.99966753182923e-69
	Description: locus:rab-6.1 Ras-related protein Rab-6.1 status:Confirmed UniProt:P34213 protein_id:CAA77590.1
Oxytricha	Contig5831.0.g6	2.0009381340492598e-66
	Description: Ras family
SGD	YLR262C	3.9989468726312675e-65
	Description: YPT6 Rab family GTPase, Ras-like GTP binding protein involved in the secretory pathway, required for fusion of endosome-derived vesicles with the late Golgi, maturation of the vacuolar carboxypeptidase Y; has similarity to the human GTPase, Rab6
Stentor Coeruleus	SteCoe_6177	1.462486227251231e-31
	Description: None

General Information

No Data fetched for General Information

Associated Literature

1. Ref:16933976: Eisen JA, Coyne RS, Wu M, Wu D, Thiagarajan M, Wortman JR, Badger JH, Ren Q, Amedeo P, Jones KM, Tallon LJ, Delcher AL, Salzberg SL, Silva JC, Haas BJ, Majoros WH, Farzad M, Carlton JM, Smith RK, Garg J, Pearlman RE, Karrer KM, Sun L, Manning G, Elde NC, Turkewitz AP, Asai DJ, Wilkes DE, Wang Y, Cai H, Collins K, Stewart BA, Lee SR, Wilamowska K, Weinberg Z, Ruzzo WL, Wloga D, Gaertig J, Frankel J, Tsao CC, Gorovsky MA, Keeling PJ, Waller RF, Patron NJ, Cherry JM, Stover NA,

Sequences

>TTHERM_01079210(coding)
ATGCAAGATTAAAGCATAACAAAATAAGTTAAAAAATATAAATTAGTTTTTATTGGAGAT
TAGTCTGTTGGAAAAACTTCAATCATCAATAGATTTATAAACGACTCATTTTAGGGAACG
CAATAACCTACAGTTGGTATCGACTTCGTTGCAAAAACACTTCATTTAGATAATAAAACA
ATCAGATTATAATTATGGGATACTGCTGGTTAAGAACGTTTTAGAAGTTTAATACCCTCA
TATATCAGAGATTCTGATGCAGCTATAATTGTCTATGATATAACAAACTAAGCTTCATTT
GCAAGTGTAAACAAATGGTTAGATTACGTAAGAGAAGAAAGAGGAGATGGCGTTTTGATA
GTTTTATTGGCAAATAAATTAGATTTACCTGATTAAAGAGCTGTTTAAACTGTGGATGGA
TAGCAATTTGCAAAATAACAAAATTTAATATTCAGTGAAGTTTCTGCTAAGGAAGGAAAT
AATATAAATGATGTTTTCAAAAATTTAGCTTAACTTTTATAAGGAAGTGAAAAATCTGAT
CAAACTGATATGGATTTGGGAATTAAAGGCGCAGCTAGTAATAATAGCAAATGCACTACT
GCAGGAGGAACAATATAGTTAAGTACTAACTAAGATGCACCTGTTAAGTAAACTTAAGAC
AAATAGTGTTAATGTTGA

>TTHERM_01079210(gene)
ATGCAAGATTAAAGCATAACAAAATAAGTTAAAAAATATAAATTAGTTTTTATTGGAGAT
TAGTCTGTTGGAAAAACTTCAATCATCAATAGATTTATAAACGACTCATTTTAGGGAACG
CAATAAGTAAGCTGCAATATTTTGATATTTAAACATTTTTTAAATATTTAATTGACATAA
GCTCTTAATAAACAAACTTACTTAAGGATTATATTGATACATTATTATAAACAGCAAATG
AATAAGATTAATTCTTTTATTTTATAACTTAGCCTACAGTTGGTATCGACTTCGTTGCAA
AAACACTTCATTTAGATAATAAAACAATCAGATTATAATTATGGGATACTGCTGGTTAAG
AACGTTTTAGAAGTTTAATACCCTCATATATCAGAGATTCTGATGCAGCTATAATTGTCT
ATGATATAACAAGTATATAAAACGAACTATTATAATATTGGTCAATTTTAAGATTAATTT
TTAATCAATAGACTAAGCTTCATTTGCAAGTGTAAACAAATGGTTAGATTACGTAAGAGA
AGAAAGAGGAGATGGCGTTTTGATAGTTTTATTGGCAAATAAATTAGATTTACCTGATTA
AAGGTAACTCTATTTAATAATTAAATAATTTAACCAATATGTGTATATTTAATTAGAGCT
GTTTAAACTGTGGATGGATAGCAATTTGCAAAATAACAAAATTTAATATTCAGTGAAGTT
TCTGCTAAGGAAGGAAATAATATAAATGATGTTTTCAAAAATTTAGCTTAACTTTTATAA
GGAAGTGAAAAATCTGATCAAACTGATATGGATTTGGGAATTAAAGGCGCAGCTAGTAGT
ATTATTTGAAGAAATATATGTTTTTATTTTTGAAATATTTTAATTTTATAATCAAGATAA
TAGCAAATGCACTACTGCAGGAGGAACAATATAGTTAAGTACTAACTAAGATGCACCTGT
TAAGTAAACTTAAGACAAATAGTGTTAATGTTGA

>TTHERM_01079210(protein)
MQDQSITKQVKKYKLVFIGDQSVGKTSIINRFINDSFQGTQQPTVGIDFVAKTLHLDNKT
IRLQLWDTAGQERFRSLIPSYIRDSDAAIIVYDITNQASFASVNKWLDYVREERGDGVLI
VLLANKLDLPDQRAVQTVDGQQFAKQQNLIFSEVSAKEGNNINDVFKNLAQLLQGSEKSD
QTDMDLGIKGAASNNSKCTTAGGTIQLSTNQDAPVKQTQDKQCQC