Identifiers and Description

Gene Model Identifier

TTHERM_01099050

Standard Name

RRM53 (RNA recognition motif-containing protein 53)

Aliases

PreTt20575 | 232.m00042

Description

RRM53 RNA recognition motif protein; polyadenylate-binding protein- putative

Genome Browser (Macronucleus)

Full Screen View


Genome Browser (Micronucleus)

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Gene Ontology Annotations

No Data fetched for Gene Ontology Annotations

Domains

  • ( PF00076 ) RNA recognition motif. (a.k.a. RRM,
  • ( PF08777 ) RNA binding motif

Gene Expression Profile

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source Identifier Score
Tetrahymena borealis EI9_19377.1 2.0004261429631518e-110
Description: hypothetical protein (275 aa)
SGD YER165W 0.00000000002000577768187062
Description: PAB1 Poly(A) binding protein, part of the 3-end RNA-processing complex, mediates interactions between the 5 cap structure and the 3 mRNA poly(A) tail, involved in control of poly(A) tail length, interacts with translation factor eIF-4G
Oxytricha Contig11357.0.g94 0.000000009996807949091551
Description: RNA recognition motif_ (a_k_a_ RRM, RBD, or RNP domain)
WormBase WBGene00003903 0.0000007997233352734267
Description: locus:pab-2 status:Confirmed UniProt:Q19581 protein_id:CAA90446.2

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences 

>TTHERM_01099050(coding)
ATGGCTGACAAGGAAGAAATCACTTTAGATGCTTATGCTAAGAAGCAAAAATTCTAAGAA
GGTGGCAATAAAAAGAAGGAAAACGGCAAAGGAGGAAAAGGTAGAATTGAAAAGAAATTG
AACGGAGTAAAATCTGTCAAAGGTGCTATCCGTCGTACTGGTCGCTAAGATAACAATCGC
TCTGGAGGGAAACCTCGTTAAAACTCCTCAAATAATTCAAACAAATAGAGGAGCATCAGC
AGACCTGTTAAGGAATCTAGACCTGCTAAGATCAAAACTGTTCGCCCTATTCCTGAACAC
AAAAAAAGAATCGTCAAAGTTTACAACTTAGTTCCTAATATTAACAACGAAGAATTCTAT
AACCTCTTTGTCAAATATGGAAGTATCGAGTAATCAAAGATCGAAACTGATAAGAAAGGA
AAGTCTGAAGAAAAGGGTTATGTTGTTTACAGAGATAACGATGCTGCTAAGCGTGCTATT
GATGACTTGAATGGTGTCGAATTAGAAGGTAGAATAATTACAGTTGAATTCATGAAGGAC
GGTGACAAACTCCCTGATAGACAAAATAACAATGCTAGCAGTGGAGAAAGAGAAAGAAGA
AACTCCGATAGCCATAATAGCCAAGGTGTATAAAAGAAGAGAATCTTTAAGGATAAGGAT
AACAGAAGAGATAGCAGAAGAGATAGAGATAGAAACAGTAACAATGGCAACAAAAGAAGA
GATTTCGATAGAAATAGAAGAAATAACGGTTCTCACAATAATAATGGAAACAGAAATAGA
AACAATAACAGAAATAATAACAATAACAGAAATAACAATAGAAATAACAGAAAATACAGC
AAATGA


>TTHERM_01099050(gene)
ATGGCTGACAAGGAAGAAATCACTTTAGATGCTTATGCTAAGAAGCAAAAATTCTAAGAA
GGTGGCAATAAAAAGAAGGAAAACGGCAAAGGAGGAAAAGGTAGAATTGAAAAGAAATTG
AACGGAGTAAAATCTGTCAAAGGTGCTATCCGTCGTACTGGTCGCTAAGATAACAATCGC
TCTGGAGGGGTATATTCTATAATAAACAATAATTAAATTACTCGATGAATAAATCTGCTA
AAACGATTAAGATATTTTGCCTATTCAAAACAATTACTAACTATCTAAGGAGCTAAAATC
GGCAAGCTAGATTAGAAGGCATGAGGAGGAAAAAATATTTTCATCGTTTAGTTATTCTTC
TATTTCTATCATTTTTCAAAAAAAGGGGATACTTAGTATTAAATAAAAGTTTTCCTTTTT
TAGAAAAATGCTGTTTAATGATTGATATTGATGATTGATAAGGAGAGTAAAAACAGTCTA
GGTCATTCATTAATATTCCTTTTCAAAAGAAAAAAATTCTTTTAATACTTAAAAGCAGAA
ATAAAATGATTTGATTCTGCTAGACAGTCTTTACTATATTAGTAAAAAGCAAAATAAAAA
AGCCAAGTGCATGAAAAAAATAATATTCCAAAATGAACTTTTCCTAAATTTAATTGCCAG
ATTGGCACATTTTCCCCCACTATACAATCACCAACACACACACTCAAATCTCATAAATCC
CCCATAAAAATCCCTTTTAAATAGTTGATTTTATTTGAATTTTATCTTTGGTTAAGAGAA
ACAGTATTGTTTGTTGATTAGGCATGGTGATTGCCTAATCCTAATATTATACGACGTATA
ATTTATTTGTATGGGCAAAAACTTTATAAAAAGAATGAGTTATTGGTGTCGTGATGTTAA
ATGAATGAATTTTTTAAATTCTATCAATTTTTATTTTAAAAGACTTGGACAAAGTCTAAA
TTTCAATTTCTACCTCCTGCGATTGTTTCTTTCTTAATAAGATAATCGAGAATTCAAATA
AAAAATGTTTGTTAATCCTTTTTGATAATCTGTGGCTTTCTATTTTTTTGAGCTATAAAA
CCCTATCATTCATACTTAGCACTATTCTCATATTATCATTCATATGTTCAAAAGTTTCTG
ATCACATAAGAAATTAGTAAAGACAAGATTATCTTTCAAATTTTAAGTAAAAACAACTTA
TCTAGACATAAAAATAATAAATTTTTGAAAACAGAAATTAAAAATAGCTATTTTATTTAA
AAATCTTATAAGCACAAATAAGATCAGAGTTATGTAAAAAACAAACATAAAAATTTAAAG
CAAAATAATTTATGATAAAATCAATTCTAGGATTTAACATTCAAAAGATAAATTATGATA
TTAAAATGAATTATAACTAATGAAATCAGATATCTATAAAGCTGAATCTATCTATATTTG
ATAAAATACTTAAGATTTAGTTAAATATTCTCCTGTAAACATTAAAATTTTATTTTCCAT
TAAATAAATAGCTATAAAGTATTAACTTCCTATCAAACTAGATATTATAAATAAATATGC
GTTAGTATAATTCTAAATAAGAAGTAAGGCATATCTATCTATCCTTTATCACATCAAATC
ATTATCAATCATTATTTTTGTTTAAATCTAGAAGAAAACTAATTTAAATTAGAAAAAATT
TGGTTAAGCAATTAGCGTGTATCACCAATAATTAATATTACATAGAAATAATTAGAAGTT
TAGAAACAGATTTATTCATGTTATATGAATGGTTAATTAATATTTTAAAAAATATTATTT
TTATTAGAAACCTCGTTAAAACTCCTCAAATAATTCAAACAAATAGAGGAGCATCAGCAG
ACCTGTTAAGGAATCTAGACCTGCTAAGATCAAAACTGTTCGCCCTATTCCTGAACACAA
AAAAAGAATCGTCAAAGTTTACAACTTAGTTCCTAATATTAACAACGAAGAATTCTATGT
AAAATTTTTAAGCTGCCTTATTTCAAAAAGTTTATCTTTGTTCTAAATAAAATAAGAACC
TCTTTGTCAAATATGGAAGTATCGAGTAATCAAAGATCGAAACTGATAAGAAAGGAAAGT
CTGAAGAAAAGGGTTATGTTGTTTACAGAGATAACGATGCTGCTAAGCGTGCTATTGATG
ACTTGAATGGTAACTTATATAATTTAAATCTCAAAAAGCAAACAATTCATTTAATTAGCT
TCAATAATAACTTTTCTTTTTGTAATACTCTAAGGTGTCGAATTAGAAGGTAGAATAATT
ACAGTTGAATTCATGAAGGACGGTGACAAACTCCCTGATAGACAAAATAACAATGCTAGC
AGTGGAGAAAGAGAAAGAAGAAACTCCGATAGCCATAATAGCCAAGGTGTATAAAAGAAG
AGAATCTTTAAGGATAAGGATAACAGAAGAGATAGGTAATTTATTACAAAAGCATTCATA
AACTGATTGCTCATCACATATAATTTAAAAAAATAAACAGCAGAAGAGATAGAGATAGAA
ACAGTAACAATGGCAACAAAAGAAGAGATTTCGATAGAAATAGAAGAAATAACGGTTCTC
ACAATAATAATGGAAACAGAAATAGAAACAATAACAGAAATAATAACAATAACAGAAATA
ACAATAGAAATAACAGAAAATACAGCAAATGA


>TTHERM_01099050(protein)
MADKEEITLDAYAKKQKFQEGGNKKKENGKGGKGRIEKKLNGVKSVKGAIRRTGRQDNNR
SGGKPRQNSSNNSNKQRSISRPVKESRPAKIKTVRPIPEHKKRIVKVYNLVPNINNEEFY
NLFVKYGSIEQSKIETDKKGKSEEKGYVVYRDNDAAKRAIDDLNGVELEGRIITVEFMKD
GDKLPDRQNNNASSGERERRNSDSHNSQGVQKKRIFKDKDNRRDSRRDRDRNSNNGNKRR
DFDRNRRNNGSHNNNGNRNRNNNRNNNNNRNNNRNNRKYSK