Identifiers and Description

Gene Model Identifier

TTHERM_01099050

Standard Name

RRM53 (RNA recognition motif-containing protein 53)

Aliases

PreTt20575 | 232.m00042

Description

RRM53 RNA recognition motif protein; polyadenylate-binding protein- putative

Genome Browser (Macronucleus)

Full Screen View

No Genome Browser Data Present

Genome Browser (Micronucleus)

Full Screen View

No Genome Browser Data Present

External Links

• Uniprot
• Alphafold

Gene Ontology Annotations

No Data fetched for Gene Ontology Annotations

Domains

• ( PF00076 ) RNA recognition motif
• ( PF08777 ) RNA binding motif

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

No results were calculated for this gene in GeneMania.

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source	Identifier	Score
Tetrahymena borealis	EI9_19377.1	2.0004261429631518e-110
	Description: hypothetical protein (275 aa)
SGD	YER165W	0.00000000002000577768187062
	Description: PAB1 Poly(A) binding protein, part of the 3-end RNA-processing complex, mediates interactions between the 5 cap structure and the 3 mRNA poly(A) tail, involved in control of poly(A) tail length, interacts with translation factor eIF-4G
Oxytricha	Contig11357.0.g94	0.000000009996807949091551
	Description: RNA recognition motif_ (a_k_a_ RRM, RBD, or RNP domain)
WormBase	WBGene00003903	0.0000007997233352734267
	Description: locus:pab-2 status:Confirmed UniProt:Q19581 protein_id:CAA90446.2
WormBase	WBGene00017472	0.0000007997233352734267
	Description: locus:cst-1 Serine/threonine-protein kinase cst-1 status:Confirmed UniProt:Q9NB31 protein_id:CCD65402.1

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>TTHERM_01099050(coding)
ATGGCTGACAAGGAAGAAATCACTTTAGATGCTTATGCTAAGAAGCAAAAATTCTAAGAA
GGTGGCAATAAAAAGAAGGAAAACGGCAAAGGAGGAAAAGGTAGAATTGAAAAGAAATTG
AACGGAGTAAAATCTGTCAAAGGTGCTATCCGTCGTACTGGTCGCTAAGATAACAATCGC
TCTGGAGGGAAACCTCGTTAAAACTCCTCAAATAATTCAAACAAATAGAGGAGCATCAGC
AGACCTGTTAAGGAATCTAGACCTGCTAAGATCAAAACTGTTCGCCCTATTCCTGAACAC
AAAAAAAGAATCGTCAAAGTTTACAACTTAGTTCCTAATATTAACAACGAAGAATTCTAT
AACCTCTTTGTCAAATATGGAAGTATCGAGTAATCAAAGATCGAAACTGATAAGAAAGGA
AAGTCTGAAGAAAAGGGTTATGTTGTTTACAGAGATAACGATGCTGCTAAGCGTGCTATT
GATGACTTGAATGGTGTCGAATTAGAAGGTAGAATAATTACAGTTGAATTCATGAAGGAC
GGTGACAAACTCCCTGATAGACAAAATAACAATGCTAGCAGTGGAGAAAGAGAAAGAAGA
AACTCCGATAGCCATAATAGCCAAGGTGTATAAAAGAAGAGAATCTTTAAGGATAAGGAT
AACAGAAGAGATAGCAGAAGAGATAGAGATAGAAACAGTAACAATGGCAACAAAAGAAGA
GATTTCGATAGAAATAGAAGAAATAACGGTTCTCACAATAATAATGGAAACAGAAATAGA
AACAATAACAGAAATAATAACAATAACAGAAATAACAATAGAAATAACAGAAAATACAGC
AAATGA

>TTHERM_01099050(gene)
ATGGCTGACAAGGAAGAAATCACTTTAGATGCTTATGCTAAGAAGCAAAAATTCTAAGAA
GGTGGCAATAAAAAGAAGGAAAACGGCAAAGGAGGAAAAGGTAGAATTGAAAAGAAATTG
AACGGAGTAAAATCTGTCAAAGGTGCTATCCGTCGTACTGGTCGCTAAGATAACAATCGC
TCTGGAGGGGTATATTCTATAATAAACAATAATTAAATTACTCGATGAATAAATCTGCTA
AAACGATTAAGATATTTTGCCTATTCAAAACAATTACTAACTATCTAAGGAGCTAAAATC
GGCAAGCTAGATTAGAAGGCATGAGGAGGAAAAAATATTTTCATCGTTTAGTTATTCTTC
TATTTCTATCATTTTTCAAAAAAAGGGGATACTTAGTATTAAATAAAAGTTTTCCTTTTT
TAGAAAAATGCTGTTTAATGATTGATATTGATGATTGATAAGGAGAGTAAAAACAGTCTA
GGTCATTCATTAATATTCCTTTTCAAAAGAAAAAAATTCTTTTAATACTTAAAAGCAGAA
ATAAAATGATTTGATTCTGCTAGACAGTCTTTACTATATTAGTAAAAAGCAAAATAAAAA
AGCCAAGTGCATGAAAAAAATAATATTCCAAAATGAACTTTTCCTAAATTTAATTGCCAG
ATTGGCACATTTTCCCCCACTATACAATCACCAACACACACACTCAAATCTCATAAATCC
CCCATAAAAATCCCTTTTAAATAGTTGATTTTATTTGAATTTTATCTTTGGTTAAGAGAA
ACAGTATTGTTTGTTGATTAGGCATGGTGATTGCCTAATCCTAATATTATACGACGTATA
ATTTATTTGTATGGGCAAAAACTTTATAAAAAGAATGAGTTATTGGTGTCGTGATGTTAA
ATGAATGAATTTTTTAAATTCTATCAATTTTTATTTTAAAAGACTTGGACAAAGTCTAAA
TTTCAATTTCTACCTCCTGCGATTGTTTCTTTCTTAATAAGATAATCGAGAATTCAAATA
AAAAATGTTTGTTAATCCTTTTTGATAATCTGTGGCTTTCTATTTTTTTGAGCTATAAAA
CCCTATCATTCATACTTAGCACTATTCTCATATTATCATTCATATGTTCAAAAGTTTCTG
ATCACATAAGAAATTAGTAAAGACAAGATTATCTTTCAAATTTTAAGTAAAAACAACTTA
TCTAGACATAAAAATAATAAATTTTTGAAAACAGAAATTAAAAATAGCTATTTTATTTAA
AAATCTTATAAGCACAAATAAGATCAGAGTTATGTAAAAAACAAACATAAAAATTTAAAG
CAAAATAATTTATGATAAAATCAATTCTAGGATTTAACATTCAAAAGATAAATTATGATA
TTAAAATGAATTATAACTAATGAAATCAGATATCTATAAAGCTGAATCTATCTATATTTG
ATAAAATACTTAAGATTTAGTTAAATATTCTCCTGTAAACATTAAAATTTTATTTTCCAT
TAAATAAATAGCTATAAAGTATTAACTTCCTATCAAACTAGATATTATAAATAAATATGC
GTTAGTATAATTCTAAATAAGAAGTAAGGCATATCTATCTATCCTTTATCACATCAAATC
ATTATCAATCATTATTTTTGTTTAAATCTAGAAGAAAACTAATTTAAATTAGAAAAAATT
TGGTTAAGCAATTAGCGTGTATCACCAATAATTAATATTACATAGAAATAATTAGAAGTT
TAGAAACAGATTTATTCATGTTATATGAATGGTTAATTAATATTTTAAAAAATATTATTT
TTATTAGAAACCTCGTTAAAACTCCTCAAATAATTCAAACAAATAGAGGAGCATCAGCAG
ACCTGTTAAGGAATCTAGACCTGCTAAGATCAAAACTGTTCGCCCTATTCCTGAACACAA
AAAAAGAATCGTCAAAGTTTACAACTTAGTTCCTAATATTAACAACGAAGAATTCTATGT
AAAATTTTTAAGCTGCCTTATTTCAAAAAGTTTATCTTTGTTCTAAATAAAATAAGAACC
TCTTTGTCAAATATGGAAGTATCGAGTAATCAAAGATCGAAACTGATAAGAAAGGAAAGT
CTGAAGAAAAGGGTTATGTTGTTTACAGAGATAACGATGCTGCTAAGCGTGCTATTGATG
ACTTGAATGGTAACTTATATAATTTAAATCTCAAAAAGCAAACAATTCATTTAATTAGCT
TCAATAATAACTTTTCTTTTTGTAATACTCTAAGGTGTCGAATTAGAAGGTAGAATAATT
ACAGTTGAATTCATGAAGGACGGTGACAAACTCCCTGATAGACAAAATAACAATGCTAGC
AGTGGAGAAAGAGAAAGAAGAAACTCCGATAGCCATAATAGCCAAGGTGTATAAAAGAAG
AGAATCTTTAAGGATAAGGATAACAGAAGAGATAGGTAATTTATTACAAAAGCATTCATA
AACTGATTGCTCATCACATATAATTTAAAAAAATAAACAGCAGAAGAGATAGAGATAGAA
ACAGTAACAATGGCAACAAAAGAAGAGATTTCGATAGAAATAGAAGAAATAACGGTTCTC
ACAATAATAATGGAAACAGAAATAGAAACAATAACAGAAATAATAACAATAACAGAAATA
ACAATAGAAATAACAGAAAATACAGCAAATGA

>TTHERM_01099050(protein)
MADKEEITLDAYAKKQKFQEGGNKKKENGKGGKGRIEKKLNGVKSVKGAIRRTGRQDNNR
SGGKPRQNSSNNSNKQRSISRPVKESRPAKIKTVRPIPEHKKRIVKVYNLVPNINNEEFY
NLFVKYGSIEQSKIETDKKGKSEEKGYVVYRDNDAAKRAIDDLNGVELEGRIITVEFMKD
GDKLPDRQNNNASSGERERRNSDSHNSQGVQKKRIFKDKDNRRDSRRDRDRNSNNGNKRR
DFDRNRRNNGSHNNNGNRNRNNNRNNNNNRNNNRNNRKYSK