Identifiers and Description

Gene Model Identifier

TTHERM_01142730

Standard Name

RPL9 (Ribosomal protein of the large subunit)

Aliases

PreTt04328 | 252.m00039 | 3824.m03216 | RPL6-E.coli

Description

RPL9 60S ribosomal protein L9; Ribosomal protein L6 containing protein; Homolog of yeast RPL9(/RPL6) and E.coli RPL6

Genome Browser (Macronucleus)

Full Screen View

No Genome Browser Data Present

Genome Browser (Micronucleus)

Full Screen View

No Genome Browser Data Present

External Links

• Uniprot
• Alphafold

Gene Ontology Annotations

Cellular Component

• ribosome (IEA) | GO:0005840

Molecular Function

• rRNA binding (IEA) | GO:0019843
• structural constituent of ribosome (IEA) | GO:0003735

Biological Process

• translation (IEA) | GO:0006412

Domains

No Data fetched for Domains

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

No results were calculated for this gene in GeneMania.

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source	Identifier	Score
Tetrahymena borealis	EI9_01482.1	3.001062636953563e-123
	Description: ribosomal protein L6 containing protein (189 aa)
DictyBase	DDB_G0278959	1.0002546821282671e-50
	Description: rpl9 on chromosome: 3 position 1387306 to 1388202
Oxytricha	Contig14534.0.g66	5.00115835552873e-49
	Description: Ribosomal protein L6
WormBase	WBGene00004420	1.000499495426459e-47
	Description: locus:rpl-9 60S ribosomal protein L9 status:Confirmed UniProt:Q95Y90 protein_id:CCD63603.1
WormBase	WBGene00001028	1.000499495426459e-47
	Description: locus:dnj-10 DnaJ homolog dnj-10 status:Confirmed UniProt:Q8TA83 protein_id:CCD62136.1
SGD	YNL067W	1.0003292389192957e-45
	Description: RPL9B Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl9Ap and has similarity to E. coli L6 and rat L9 ribosomal proteins
Stentor Coeruleus	SteCoe_7487	9.602680054508676e-24
	Description: None

General Information

No Data fetched for General Information

Associated Literature

1. Ref:22052974: Klinge S, Voigts-Hoffmann F, Leibundgut M, Arpagaus S, Ban N (2011) Crystal structure of the eukaryotic 60S ribosomal subunit in complex with initiation factor 6. Science (New York, N.Y.) 334(6058):941-8

Sequences

>TTHERM_01142730(coding)
ATGAGACACTTACTTACCGAAGTCAACGTACCCATCCCTGATAAGGTCACCATCACTGCT
AAATAAAGAGTAGTTGAAGTCAAGGGACCCTTAGGTACCATCAAGAGAGCTTTCAGATAC
GCCTCTGTTGATATTCAAAAGCCTACCGCCGACAACGTTAAGTTATAAATCTGGTAAGCT
TCCAGAAAGGAAAGAGCCGTCCTCCAATCTATTGCTTCTCAAATCAAGAATATGATTAGA
GGTGTTACTGAAGGTTACAAATTCAAGATGAAGCTTGCCTTCGCTCACTTCCCCATTTAA
GAAGCTGTTGCTAAGGATGGTTCCTCCATTGAAATTAAGCATTTCTTGGGTGAAAAGAGA
ATTAGAAGAATCCAAGCTCTTCCTGGTGTCAAGATCTCCAGAAAGGACGAAGAAAAGAAT
ACCCTCACCCTCTAAGGTATTGACTTGAACAACGTCTCCCAAACTTGCGCTCTCATCCAC
CAATCTTGTTTGGTCAAAGAAAAGGATATCAGACAATTCTTGGACGGTATTTACGTTTCT
GATAAGAGACTCGCCATGAACGAGTGA

>TTHERM_01142730(gene)
ATGAGACACTTACTTACCGAAGTCAACGTACCCATCCCTGATAAGGTCACCATCACTGCT
AAATAAAGAGTAGTTGAAGTCAAGGGACCCTTAGGTACCATCAAGAGAGCTTTCAGATAC
GCCTCTGTTGATATTCAAAAGCCTACCGCCGACAACGTTAAGTTATAAATCTGGTAAGCT
TCCAGAAAGGAAAGAGCCGTCCTCCAATCTATTGCTTCTCAAATCAAGAATATGATTAGA
GGTGTTACTGAAGGTTACAAATTCAAGATGAAGCTTGCCTTCGCTCACTTCCCCATTTAA
GAAGCTGTTGCTAAGGATGGTTCCTCCATTGAAATTAAGCATTTCTTGGGTGAAAAGAGA
ATTAGAAGAATCCAAGCTCTTCCTGGTGTCAAGATCTCCAGAAAGGACGAAGAAAAGAGT
AATTCATTTTTTTTTTTTTAATATTTTTTAATATAAATGTGCATGTATTCGATTAAAATA
CTAAGAGCTATTTCGCTGATAGCTTGCATTTTAAGATTAATTTGATTAGTCTATTTTACA
GTAATTAAATTTGCTTTTCTCCTTGGTTATGCAGATATTTGGAGTAATTAATAGTCGGTC
ATCAATCAATTAATCAATGTGTATAAATCAACATTAAATAAGAATTTAGAAATCAAAATC
AATTTAAGCACATTCTCCAGAAAAAAAGTTCCTTAATATGCTAATAATAGTATCCAAATT
ATAGTTTAAAACTCATACAACAGTTTAAAATAAGTGAAATTAACAAACCAAACAACTAAG
CTACCCTTTAATGAATATTAAGTGCTAATACCTATCAATCAATCAGGTGCTTGTCCTTGT
TCTATATTTAATGAACAAGTTAGTTCACGAAGTCATAATAGGTTGATAAAAAGAGAATGA
GTTAAAATGAAGAGTAGCGAAATATTTACTGAATAGCAATAATTAGCTTAATTTAATTAA
ATTAGTTAATATAGGCGGCAGCAACAGCATTATCATCATTTTTAATTATATTTTTCAGGG
AAATAAGCAATGAAAAGATTATATTTATATAAGCTGGCTGCAGCAAAAAACTCTTTCATT
TAAGGTGTGAGTAATAAATAAATCATCCTATAAAGTAGCTCAAAGTATAATAAAGGACTG
ATTCGTATGAGTTTAAATTAAATGGAATTATATTGTTGGATAGAAAATTAATTTTGAATA
ATAACCAGATATTTTGTGAATGAACAGCAAAAAACAAAAAGACAATCAAATTAATATTAA
AATAAATGAATTAATAAATAAATAAATATATTTTATTTGGTTTACTGCACAAATATTTAC
AATAAATAAATAAAATAATAATTCTTACAATCATTTCTAACAACATATCTTTATCAATTA
TTATAGATACCCTCACCCTCTAAGGTATTGACTTGAACAACGTCTCCCAAACTTGCGCTC
TCATCCACCAATCTTGTTTGGTCAAAGAAAAGGATATCAGACAATTCTTGGACGGTATTT
ACGTTTCTGATAAGAGACTCGCCATGAACGAGTGA

>TTHERM_01142730(protein)
MRHLLTEVNVPIPDKVTITAKQRVVEVKGPLGTIKRAFRYASVDIQKPTADNVKLQIWQA
SRKERAVLQSIASQIKNMIRGVTEGYKFKMKLAFAHFPIQEAVAKDGSSIEIKHFLGEKR
IRRIQALPGVKISRKDEEKNTLTLQGIDLNNVSQTCALIHQSCLVKEKDIRQFLDGIYVS
DKRLAMNE