Identifiers and Description

Gene Model Identifier

TTHERM_01164080

Standard Name

RAB28 (RAB GTPase 28)

Aliases

PreTt18012 | 260.m00019 | 3796.m00117

Description

RAB28 small guanosine triphosphatase family Ras-related in brain (Rab) family protein; Homolog of H. sapiens Rab28; small monomeric GTPase that regulates membrane fusion and fission events

Genome Browser (Macronucleus)

Full Screen View

No Genome Browser Data Present

Genome Browser (Micronucleus)

Full Screen View

No Genome Browser Data Present

External Links

• Uniprot
• Alphafold

Gene Ontology Annotations

Cellular Component

• intracellular anatomical structure (IEA) | GO:0005622

Molecular Function

• GTP binding (IEA) | GO:0005525

Biological Process

• small GTPase-mediated signal transduction (IEA) | GO:0007264

Domains

No Data fetched for Domains

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

No results were calculated for this gene in GeneMania.

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source	Identifier	Score
Tetrahymena borealis	EI9_20814.1	3.001349705199738e-130
	Description: Ras family protein (219 aa)
WormBase	WBGene00003579	3.001349705199738e-130
	Description: locus:ndx-2 Putative nudix hydrolase 2 status:Confirmed UniProt:O61902 protein_id:CCD74269.1
Oxytricha	Contig22405.0.g93	7.998932288246191e-33
	Description: Ras family
WormBase	WBGene00004271	4.9988726541653934e-26
	Description: locus:rab-7 status:Confirmed UniProt:Q23146 protein_id:CAA91357.1
Tetrahymena borealis	EI9_21108.1	4.9988726541653934e-26
	Description: ADP-ribosylation factor, arf (179 aa)
DictyBase	DDB_G0284985	7.002116201343823e-26
	Description: rab1D on chromosome: 4 position 2756032 to 2757408
SGD	YML001W	3.001290106883431e-24
	Description: YPT7 Rab family GTPase; GTP-binding protein of the rab family; required for homotypic fusion event in vacuole inheritance, for endosome-endosome fusion, similar to mammalian Rab7
Stentor Coeruleus	SteCoe_21983	0.000000000000012664165549094176
	Description: None

General Information

No Data fetched for General Information

Associated Literature

1. Ref:16933976: Eisen JA, Coyne RS, Wu M, Wu D, Thiagarajan M, Wortman JR, Badger JH, Ren Q, Amedeo P, Jones KM, Tallon LJ, Delcher AL, Salzberg SL, Silva JC, Haas BJ, Majoros WH, Farzad M, Carlton JM, Smith RK, Garg J, Pearlman RE, Karrer KM, Sun L, Manning G, Elde NC, Turkewitz AP, Asai DJ, Wilkes DE, Wang Y, Cai H, Collins K, Stewart BA, Lee SR, Wilamowska K, Weinberg Z, Ruzzo WL, Wloga D, Gaertig J, Frankel J, Tsao CC, Gorovsky MA, Keeling PJ, Waller RF, Patron NJ, Cherry JM, Stover NA,

Sequences

>TTHERM_01164080(coding)
ATGGATCAAGAAGACAAAGAAATTAAATTTAGTAAAAAGATATTAGTTATAGGTGAAGCA
GGTGTAGGAAAGTCCGCCATCATTTAAAAGTATGTCAATAACTTCTATCCTGAAATGTAC
AAGCAATCACTTGGATGCAATTTTTTTAGCAAACAATTAGACCTTTCAAAGACTGCATCA
GTAACTTTGAGCATATGGGATTGCAGCAGTGAAAGCTTAAAATCTAAAATGCTTAATACT
TATATATATGGATCAGATGCAGTTCTTTTTGTTTACGACATAACTAACAGAAGCAGCTTT
GACTCTATTCGTAATATTATGAAGCTAGTTTAATCTGTTTTGATAGAAAATAACGATGTA
GAGTATTGTGTTTTAGGAAATAAAAATGATTTATTCAATTAAATAGCTGTTGAAGAGGAT
TAAGCGAAAGAAATGTGTAAAATACTCAATCTCCCCTACTATTCTGTTTCAGCTAAAATG
GGATCCAATCTTAACGAATGTTTTAAAAATATAGCATACAAAGTCTGCAAATTACCTTTC
CCTTCAGAAGAAAAGAAAAATGATAAAAGCTTAGAAGGATCTATTCCAGATTTAAGAAGT
GAAGTAAAGGGAAGTAATGGAGACAACAAGACATCAAGTGGATGCAACATATTTTGA

>TTHERM_01164080(gene)
ATGGATCAAGAAGACAAAGAAATTAAATTTAGTAAAAAGATATTAGTTATAGGTGAAGCA
GGTGTAGGAAAGTCCGCCATCATTTAAAAGTATGTCAATAACTTCTATCCTGAAATGTAC
AAGCAATCACTTGGATGCAATTTTTTTAGCAAAGTAAGTTAATAAATGATTTATCAATAA
ACATATGTGAAATATTATTTTAAAGCAATTAGACCTTTCAAAGACTGCATCAGTAACTTT
GAGCATATGGGATTGCAGCAGTATGATTTTTTAATATTTATAGCTAATAAAAACACAATT
TTTTATCAGGTGAAAGCTTAAAATCTAAAATGCTTAATACTTATATATATGGATCAGATG
CAGTAAAATTATTAGCTGATATATTTATTTTCATAAATTTAGAATTTTTAAATATCTAAA
TTGAGGTTCTTTTTGTTTACGACATAACTAACAGAAGCAGCTTTGACTCTATTCGTAATA
TTATGAAGCTAGTTTAATCTGTTTTGATAGAAAATAACGATGTAGAGTATTGTGTTTTAG
GAAATAAAAATGATTTATTCAATTAAATAGCTGTTGAAGAGGATTAAGCGAAAGAAGTAA
ACTTTTTTAAATAAACAAGCAATTTTTTTATTAAGTTGTCTTGCTAGCATGACATGAAAA
ATATTTTAAAATAATTATTTTAGATGTGTAAAATACTCAATCTCCCCTACTATTCTGTTT
CAGCTAAAATGGGATCCAATCTTAACGAATGTTTTAAAAATATAGCATACAAAGTCTGCA
AATTACCTTTCCCTTCAGAAGAAAAGGTATTAAACATGCAAATATTAAAATAAATTAAAA
TTATTTAATTAAAAATATAGAAAAATGATAAAAGCTTAGAAGGATCTATTCCAGATTTAA
GAAGTGAAGTAAAGGGAAGTAATGGAGACAACAAGACATCAAGTGGATGCAACATATTTT
GA

>TTHERM_01164080(protein)
MDQEDKEIKFSKKILVIGEAGVGKSAIIQKYVNNFYPEMYKQSLGCNFFSKQLDLSKTAS
VTLSIWDCSSESLKSKMLNTYIYGSDAVLFVYDITNRSSFDSIRNIMKLVQSVLIENNDV
EYCVLGNKNDLFNQIAVEEDQAKEMCKILNLPYYSVSAKMGSNLNECFKNIAYKVCKLPF
PSEEKKNDKSLEGSIPDLRSEVKGSNGDNKTSSGCNIF