Identifiers and Description

Gene Model Identifier

TTHERM_01164080

Standard Name

RAB28 (RAB GTPase 28)

Aliases

PreTt18012 | 260.m00019 | 3796.m00117

Description

RAB28 small guanosine triphosphatase family Ras-related in brain (Rab) family protein; Homolog of H; sapiens Rab28; small monomeric GTPase that regulates membrane fusion and fission events; Small GTPase

Genome Browser (Macronucleus)

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No Genome Browser Data Present

Genome Browser (Micronucleus)

Full Screen View

No Genome Browser Data Present

External Links

• Uniprot
• Alphafold

Gene Ontology Annotations

Cellular Component

• chloroplast ribosome (IEA) | GO:0043253
• extracellular membraneless organelle (IEA) | GO:0043264
• female pronucleus (IEA) | GO:0001939
• glutathione hydrolase complex (IEA) | GO:0061672
• laminin-8 complex (IEA) | GO:0043257
• MICOS complex (IEA) | GO:0061617
• obsolete ectoplasm (IEA) | GO:0043265
• obsolete integral component of mitochondrial membrane (IEA) | GO:0032592
• ubiquitin ligase complex (IEA) | GO:0000151

Molecular Function

• 11-deoxycorticosterone binding (IEA) | GO:1903878
• 17alpha-hydroxyprogesterone binding (IEA) | GO:1903880
• 2-octaprenyl-6-methoxyphenol hydroxylase activity (IEA) | GO:0008681
• 3-hydroxybutyrate dehydrogenase activity (IEA) | GO:0003858
• alpha-humulene synthase activity (IEA) | GO:0080017
• Atg12 ligase activity (IEA) | GO:0061660
• delta5-delta2,4-dienoyl-CoA isomerase activity (IEA) | GO:0008416
• FAT10 ligase activity (IEA) | GO:0061661
• folate:monoatomic anion antiporter activity (IEA) | GO:0008518
• folic acid transmembrane transporter activity (IEA) | GO:0008517
• G protein-coupled serotonin receptor binding (IEA) | GO:0031821
• insulin-like growth factor II binding (IEA) | GO:0031995
• kappa-type opioid receptor binding (IEA) | GO:0031851
• L-ascorbate:sodium symporter activity (IEA) | GO:0008520
• L-gamma-glutamyl-L-propargylglycine hydroxylase activity (IEA) | GO:0062148
• mercury ion transmembrane transporter activity (IEA) | GO:0015097
• N-acetyl-beta-D-glucosaminide beta-(1,3)-galactosyltransferase activity (IEA) | GO:0008499
• obsolete 3-HSA hydroxylase activity (IEA) | GO:0034819
• obsolete 4-chloronitrobenzene nitroreductase activity (IEA) | GO:0052602
• obsolete aminoacetone:oxygen oxidoreductase(deaminating) activity (IEA) | GO:0052594
• obsolete delta-tocopherol cyclase activity (IEA) | GO:0052604
• obsolete endogenous peptide receptor activity (IEA) | GO:0008529
• obsolete NAD(P)+ transhydrogenase activity (IEA) | GO:0008746
• obsolete RNA polymerase I transcription regulator recruiting activity (IEA) | GO:0001186
• obsolete serpin (IEA) | GO:0004868
• obsolete sodium-translocating F-type ATPase activity (IEA) | GO:0016468
• obsolete sodium-transporting two-sector ATPase activity (IEA) | GO:0015443
• phosphatidylinositol-3-phosphate binding (IEA) | GO:0032266
• phosphatidylserine decarboxylase activity (IEA) | GO:0004609
• Pup ligase activity (IEA) | GO:0061664
• replication fork barrier binding (IEA) | GO:0031634
• sodium:iodide symporter activity (IEA) | GO:0008507
• sphingomyelin phosphodiesterase activity (IEA) | GO:0004767
• sucrose:proton symporter activity (IEA) | GO:0008506
• threonine-type peptidase activity (IEA) | GO:0070003
• thrombospondin receptor activity (IEA) | GO:0070053
• type 4 neuropeptide Y receptor binding (IEA) | GO:0031844
• UFM1 ligase activity (IEA) | GO:0061666

Biological Process

• bipolar cellular bud site selection (IEA) | GO:0007121
• budding cell apical bud growth (IEA) | GO:0007118
• budding cell bud growth (IEA) | GO:0007117
• budding cell isotropic bud growth (IEA) | GO:0007119
• cell wall modification involved in fruit ripening (IEA) | GO:0009829
• cellular response to carbendazim (IEA) | GO:0072762
• cellular response to dsRNA (IEA) | GO:0071359
• cellular response to hydroxyurea (IEA) | GO:0072711
• chaperone-mediated protein folding (IEA) | GO:0061077
• chemokine (C-C motif) ligand 5 signaling pathway (IEA) | GO:0035689
• collagen metabolic process (IEA) | GO:0032963
• commissural neuron axon guidance (IEA) | GO:0071679
• epithelium regeneration (IEA) | GO:1990399
• glycolytic process from fructose through fructose-6-phosphate (IEA) | GO:0061616
• glycolytic process from glycerol (IEA) | GO:0061613
• heme A biosynthetic process (IEA) | GO:0006784
• heme biosynthetic process (IEA) | GO:0006783
• humoral immune response (IEA) | GO:0006959
• IgG immunoglobulin transcytosis in epithelial cells mediated by FcRn immunoglobulin receptor (IEA) | GO:0002416
• immunoglobulin transcytosis in epithelial cells mediated by polymeric immunoglobulin receptor (IEA) | GO:0002415
• induction of apoptosis by extracellular signals (IEA) | GO:0008624
• interleukin-19 production (IEA) | GO:0032622
• interleukin-2 production (IEA) | GO:0032623
• L-ornithine transmembrane transport (IEA) | GO:1903352
• left horn of sinus venosus development (IEA) | GO:0061079
• lung morphogenesis (IEA) | GO:0060425
• macrophage derived foam cell differentiation (IEA) | GO:0010742
• mannosyl diphosphorylinositol ceramide metabolic process (IEA) | GO:0006676
• mitotic cytokinetic cell separation (IEA) | GO:1902409
• mitotic nuclear division (IEA) | GO:0007067
• modulation by organism of defense-related cell wall thickening in other organism involved in symbiotic interaction (IEA) | GO:0052300
• negative regulation of chemokine-mediated signaling pathway (IEA) | GO:0070100
• negative regulation of epithelial cell proliferation involved in lung morphogenesis (IEA) | GO:2000795
• negative regulation of glycine secretion, neurotransmission (IEA) | GO:1904625
• negative regulation of L-glutamine biosynthetic process (IEA) | GO:0062133
• negative regulation of PERK-mediated unfolded protein response (IEA) | GO:1903898
• negative regulation of phospholipid translocation (IEA) | GO:0061093
• negative regulation of phytoalexin metabolic process (IEA) | GO:0052321
• negative regulation of postsynaptic membrane organization (IEA) | GO:1901627
• negative regulation of SCF-dependent proteasomal ubiquitin-dependent catabolic process (IEA) | GO:0062026
• neutral lipid metabolic process (IEA) | GO:0006638
• nucleocytoplasmic transport (IEA) | GO:0006913
• obsolete activation of MAPK activity (IEA) | GO:0000187
• obsolete dynamin family protein polymerization involved in mitochondrial fission (IEA) | GO:0003374
• obsolete mRNA endonucleolytic cleavage involved in unfolded protein response (IEA) | GO:0070055
• obsolete multi-organism cellular localization (IEA) | GO:1902581
• obsolete negative regulation of cGMP catabolic process (IEA) | GO:0030830
• obsolete negative regulation of histone H3-K27 methylation (IEA) | GO:0061086
• obsolete phagosome formation (IEA) | GO:0006912
• obsolete regulation of histone H3-K79 methylation (IEA) | GO:2001160
• obsolete regulation of nucleic acid-templated transcription (IEA) | GO:1903506
• obsolete reproduction (IEA) | GO:0000003
• obsolete response to long exposure to lithium ion (IEA) | GO:0043460
• ommochrome biosynthetic process (IEA) | GO:0006727
• P granule assembly (IEA) | GO:1903863
• phagocytosis (IEA) | GO:0006909
• phagocytosis, engulfment (IEA) | GO:0006911
• phenanthrene catabolic process via trans-9(R),10(R)-dihydrodiolphenanthrene (IEA) | GO:0018956
• photosynthetic NADP+ reduction (IEA) | GO:0009780
• plant-type cell wall modification (IEA) | GO:0009827
• polyamine acetylation (IEA) | GO:0032917
• positive regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolic process (IEA) | GO:1902643
• positive regulation of fibroblast growth factor receptor signaling pathway involved in ureteric bud formation (IEA) | GO:2000704
• positive regulation of forebrain neuron differentiation (IEA) | GO:2000979
• positive regulation of prostaglandin secretion involved in immune response (IEA) | GO:0061078
• positive regulation of venous endothelial cell fate commitment (IEA) | GO:2000789
• pre-replicative complex assembly involved in cell cycle DNA replication (IEA) | GO:1902299
• pronephric glomerulus morphogenesis (IEA) | GO:0035775
• propan-2-ol biosynthetic process (IEA) | GO:1902640
• prostate induction (IEA) | GO:0060514
• protein localization to old growing cell tip (IEA) | GO:1903858
• regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolic process (IEA) | GO:1902641
• regulation of antisense RNA transcription (IEA) | GO:0060194
• regulation of chitin metabolic process (IEA) | GO:0032882
• regulation of complement-dependent cytotoxicity (IEA) | GO:1903659
• regulation of cytokinin dehydrogenase activity (IEA) | GO:1903856
• regulation of lens fiber cell differentiation (IEA) | GO:1902746
• regulation of microglial cell migration (IEA) | GO:1904139
• regulation of nucleus organization (IEA) | GO:1903353
• regulation of PERK-mediated unfolded protein response (IEA) | GO:1903897
• regulation of protein deneddylation (IEA) | GO:0060625
• regulation of protein localization to cell division site (IEA) | GO:1901900
• regulation of sprouting angiogenesis (IEA) | GO:1903670
• regulation of ubiquitin homeostasis (IEA) | GO:0010993
• single-organism intracellular transport (IEA) | GO:1902582
• striated muscle contraction (IEA) | GO:0006941
• tertiary alcohol biosynthetic process (IEA) | GO:1902645

Domains

• ( PF00071 ) Ras family

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

No results were calculated for this gene in GeneMania.

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

No Data fetched for Homologs

General Information

No Data fetched for General Information

Associated Literature

1. Ref:16933976: Eisen JA, Coyne RS, Wu M, Wu D, Thiagarajan M, Wortman JR, Badger JH, Ren Q, Amedeo P, Jones KM, Tallon LJ, Delcher AL, Salzberg SL, Silva JC, Haas BJ, Majoros WH, Farzad M, Carlton JM, Smith RK, Garg J, Pearlman RE, Karrer KM, Sun L, Manning G, Elde NC, Turkewitz AP, Asai DJ, Wilkes DE, Wang Y, Cai H, Collins K, Stewart BA, Lee SR, Wilamowska K, Weinberg Z, Ruzzo WL, Wloga D, Gaertig J, Frankel J, Tsao CC, Gorovsky MA, Keeling PJ, Waller RF, Patron NJ, Cherry JM, Stover NA,

Sequences

>TTHERM_01164080(coding)
ATGGATCAAGAAGACAAAGAAATTAAATTTAGTAAAAAGATATTAGTTATAGGTGAAGCA
GGTGTAGGAAAGTCCGCCATCATTTAAAAGTATGTCAATAACTTCTATCCTGAAATGTAC
AAGCAATCACTTGGATGCAATTTTTTTAGCAAACAATTAGACCTTTCAAAGACTGCATCA
GTAACTTTGAGCATATGGGATTGCAGCAGTGAAAGCTTAAAATCTAAAATGCTTAATACT
TATATATATGGATCAGATGCAGTTCTTTTTGTTTACGACATAACTAACAGAAGCAGCTTT
GACTCTATTCGTAATATTATGAAGCTAGTTTAATCTGTTTTGATAGAAAATAACGATGTA
GAGTATTGTGTTTTAGGAAATAAAAATGATTTATTCAATTAAATAGCTGTTGAAGAGGAT
TAAGCGAAAGAAATGTGTAAAATACTCAATCTCCCCTACTATTCTGTTTCAGCTAAAATG
GGATCCAATCTTAACGAATGTTTTAAAAATATAGCATACAAAGTCTGCAAATTACCTTTC
CCTTCAGAAGAAAAGAAAAATGATAAAAGCTTAGAAGGATCTATTCCAGATTTAAGAAGT
GAAGTAAAGGGAAGTAATGGAGACAACAAGACATCAAGTGGATGCAACATATTTTGA

>TTHERM_01164080(gene)
CGCGAAAAATTGATAAGAAATCATATAAATTTAAAATTAAAAAACTTTTGTAAAAATTTA
TTAGTGTTCACACATTTTTAGTAAAATTTAGCAAATGGATCAAGAAGACAAAGAAATTAA
ATTTAGTAAAAAGATATTAGTTATAGGTGAAGCAGGTGTAGGAAAGTCCGCCATCATTTA
AAAGTATGTCAATAACTTCTATCCTGAAATGTACAAGCAATCACTTGGATGCAATTTTTT
TAGCAAACAATTAGACCTTTCAAAGACTGCATCAGTAACTTTGAGCATATGGGATTGCAG
CAGTGAAAGCTTAAAATCTAAAATGCTTAATACTTATATATATGGATCAGATGCAGTTCT
TTTTGTTTACGACATAACTAACAGAAGCAGCTTTGACTCTATTCGTAATATTATGAAGCT
AGTTTAATCTGTTTTGATAGAAAATAACGATGTAGAGTATTGTGTTTTAGGAAATAAAAA
TGATTTATTCAATTAAATAGCTGTTGAAGAGGATTAAGCGAAAGAAATGTGTAAAATACT
CAATCTCCCCTACTATTCTGTTTCAGCTAAAATGGGATCCAATCTTAACGAATGTTTTAA
AAATATAGCATACAAAGTCTGCAAATTACCTTTCCCTTCAGAAGAAAAGAAAAATGATAA
AAGCTTAGAAGGATCTATTCCAGATTTAAGAAGTGAAGTAAAGGGAAGTAATGGAGACAA
CAAGACATCAAGTGGATGCAACATATTTTGATTTAAAAATAAAAAAATATTGTATTAATT
AAATAATTTATTAATTATGTAATTCTTAAATGAAATATAATTAAATTTAAAACTGCTATA
TTTTAACAAAATAATTAGTATTTAATTCTCATAAAATAATTATAAAGAAATAATAAGAAA
TTTA

>TTHERM_01164080(protein)
MDQEDKEIKFSKKILVIGEAGVGKSAIIQKYVNNFYPEMYKQSLGCNFFSKQLDLSKTAS
VTLSIWDCSSESLKSKMLNTYIYGSDAVLFVYDITNRSSFDSIRNIMKLVQSVLIENNDV
EYCVLGNKNDLFNQIAVEEDQAKEMCKILNLPYYSVSAKMGSNLNECFKNIAYKVCKLPF
PSEEKKNDKSLEGSIPDLRSEVKGSNGDNKTSSGCNIF