Identifiers and Description

Gene Model Identifier

TTHERM_01164180

Standard Name

RAB6D

Aliases

PreTt18022 | 260.m00029 | 3796.m00127

Description

RAB6D Rab-family small GTPase; Rab VI family protein; small monomeric GTPase that regulates membrane fusion and fission events

Genome Browser (Macronucleus)

Full Screen View

No Genome Browser Data Present

Genome Browser (Micronucleus)

Full Screen View

No Genome Browser Data Present

External Links

• Uniprot
• Alphafold

Gene Ontology Annotations

Cellular Component

• intracellular anatomical structure (IEA) | GO:0005622

Molecular Function

• GTP binding (IEA) | GO:0005525

Biological Process

• small GTPase-mediated signal transduction (IEA) | GO:0007264

Domains

No Data fetched for Domains

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

No results were calculated for this gene in GeneMania.

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

Source	Identifier	Score
Tetrahymena borealis	EI9_20825.1	1.999658401959794e-176
	Description: Ras family protein (262 aa)
DictyBase	DDB_G0268068	1.0002758036576784e-62
	Description: rab6 on chromosome: 1 position 1398472 to 1399280
SGD	YLR262C	2.0002571866765887e-62
	Description: YPT6 Rab family GTPase, Ras-like GTP binding protein involved in the secretory pathway, required for fusion of endosome-derived vesicles with the late Golgi, maturation of the vacuolar carboxypeptidase Y; has similarity to the human GTPase, Rab6
WormBase	WBGene00004269	9.000460706442912e-62
	Description: locus:rab-6.1 Ras-related protein Rab-6.1 status:Confirmed UniProt:P34213 protein_id:CAA77590.1
Oxytricha	Contig5831.0.g6	1.9999167998962255e-60
	Description: Ras family
Stentor Coeruleus	SteCoe_6177	2.1705220113036395e-29
	Description: None

General Information

No Data fetched for General Information

Associated Literature

1. Ref:16933976: Eisen JA, Coyne RS, Wu M, Wu D, Thiagarajan M, Wortman JR, Badger JH, Ren Q, Amedeo P, Jones KM, Tallon LJ, Delcher AL, Salzberg SL, Silva JC, Haas BJ, Majoros WH, Farzad M, Carlton JM, Smith RK, Garg J, Pearlman RE, Karrer KM, Sun L, Manning G, Elde NC, Turkewitz AP, Asai DJ, Wilkes DE, Wang Y, Cai H, Collins K, Stewart BA, Lee SR, Wilamowska K, Weinberg Z, Ruzzo WL, Wloga D, Gaertig J, Frankel J, Tsao CC, Gorovsky MA, Keeling PJ, Waller RF, Patron NJ, Cherry JM, Stover NA,

Sequences

>TTHERM_01164180(coding)
ATGCATACAAACGATAGCAGTAGAATGACTTCTAATTTCTCGAATACATCGAGAGTTAAG
CACAAAATTATCTTTTTAGGTGATCAACATGTCGGAAAAACATGTATTATTGAACGTTTT
ATGTATGATGTATTTGACGAAAAGCCTCATCCTACTGTAGGTGTAGATTTTCTTGCAAAG
ACTCTACATATTGATGATAAGAGTATTAGACTTTCATTGTGGGATACTGCAGGATAGGAA
AGATTCAGAAGTCTTATCCCAAGTTATTTAAGAGATGCCACATGCGCAGTAATCGTATTT
GATGTTACTAACAAAGAAAGTTTTAGTAATGTAGATAGATGGATTAAGGACTATAAAGAC
AACAGAGGTAGCGAAGCACCATGCGTTTTAGTAGCAAATAAAATTGATTTAAAACTAACA
AGGGAAGTTTAATTAGCTGATTTAGAAAAGAAAGCAAAGGAAAATAATATGAAATTTTAC
GAAATATCTGCAAAAACGGGTGAAAATGTTGCTAATATGTTTAAGGATATGGCTATTTCT
CTTTAGCCTGTAGAAAATAGTATTCTTTCTCCTAACGCAGATAATCTAAATAATTAAAAA
AAAGATTACTAGTTTGCAAATCAAAATAAATAGCCCTCTACAGGTAACACAGGAGCTCCA
GCTTAGCCTGCTACAAAAGCAAGTACTTAATAAACATAAGCGAATTAAAACTTTACGTTG
AAAAACGATAAGCCCCTTTTAAATGGATAAAATTAGTAGAGTGGTGGTAATACAGGTGGT
TCTGGAAAATGCTGCTGA

>TTHERM_01164180(gene)
ATGCATACAAACGATAGCAGTAGAATGACTTCTAATTTCTCGAATACATCGAGAGTTAAG
CACAAAATTATCTTTTTAGGTGATCAACATGTCGGAAAAACATGTATTATTGAACGTTTT
ATGTATGATGTATTTGACGAAAAGCCTCATGTAAATTAACATAATTTAGCATAAGTTCAA
TTCAAAGACAGATAAAAACCAATAACTATTAATTATAAAAAAAGCCTACTGTAGGTGTAG
ATTTTCTTGCAAAGACTCTACATATTGATGATAAGAGTATTAGACTTTCATTGTGGGATA
CTGCAGGATAGGAAAGATTCAGAAGTCTTATCCCAAGTTATTTAAGAGATGCCACATGCG
CAGTAATCGTATTTGATGTTACTAGTAAATTATTTAAAAAGATAAACATTAATACATGAA
GATTTTTCAAGAAATAGTATAATTGATATACTTTAAAATTATTTTTTTATCAGAATAAAT
ACGTCTTCAATTAAATAATATATTTATATGAAACATGAAAAATCTTAATTATTCAACTAC
TATAAAAACAACTTTTTTAATAATTTTTTATTAAAAGACAAAGAAAGTTTTAGTAATGTA
GATAGATGGATTAAGGACTATAAAGACAACAGAGGTAGCGAAGCACCATGCGTTTTAGTA
GCAAATAAAATTGATTTAAAACTAAGTAAGCAGAATTAATATTTAATTGTTATGATATAT
TTAAAGCAAAGAAGGAATGCATAAAATTTAAATTCATAAAACGAAAAAAATGACTTTAAA
TCCTTAATTTTAAATTTTAATTTATAAAAATAGCAAGGGAAGTTTAATTAGCTGATTTAG
AAAAGAAAGCAAAGGAAAATAATATGAAATTTTACGAAATATCTGCAAAAACGGGTGAAA
ATGTTGCTAATATGTTTAAGGATATGGCTATTTCTCTTTAGCCTGTAGAAAATAGTATTC
TTTCTCCTAACGCAGATAATCTAAATAATTGTAAATTTATAAAAAAAGATGTAAGCAAAA
TCATAAATTTATTTTAAAATTTGTAAAATAGAAAAAAAAGATTACTAGTTTGCAAATCAA
AATAAATAGCCCTCTACAGGTAACACAGGAGCTCCAGCTTAGCCTGCTACAAAAGCAAGT
ACTTAATAAACATAAGCGAATTAAAACTTTACGTTGAAAAACGATAAGCCCCTTTTAAAT
GGATAAAATTAGTAGAGTGGTGGTAATACAGGTGGTTCTGGAAAATGCTGCTGA

>TTHERM_01164180(protein)
MHTNDSSRMTSNFSNTSRVKHKIIFLGDQHVGKTCIIERFMYDVFDEKPHPTVGVDFLAK
TLHIDDKSIRLSLWDTAGQERFRSLIPSYLRDATCAVIVFDVTNKESFSNVDRWIKDYKD
NRGSEAPCVLVANKIDLKLTREVQLADLEKKAKENNMKFYEISAKTGENVANMFKDMAIS
LQPVENSILSPNADNLNNQKKDYQFANQNKQPSTGNTGAPAQPATKASTQQTQANQNFTL
KNDKPLLNGQNQQSGGNTGGSGKCC