Identifiers and Description

Gene Model Identifier

TTHERM_01299730

Standard Name

CPH4 (homolog of CAP-H or BRN1 condensin gene)

Aliases

PreTt17579 | 315.m00030

Description

CPH4 condensin complex subunit 2; condensin subunit, kleisin; Condensin complex subunit 2/barren

Genome Browser (Macronucleus)



Genome Browser (Micronucleus)

External Links

Gene Ontology Annotations

Cellular Component

Molecular Function

Biological Process

  • 3-keto-sphinganine metabolic process (IEA) | GO:0006666
  • aromatic amino acid family catabolic process (IEA) | GO:0009074
  • aromatic amino acid metabolic process (IEA) | GO:0009072
  • cell wall modification involved in fruit ripening (IEA) | GO:0009829
  • coenzyme A biosynthetic process (IEA) | GO:0015937
  • cysteine catabolic process (IEA) | GO:0009093
  • cytoplasmic translational termination (IEA) | GO:0002184
  • D-glycero-D-manno-heptose 7-phosphate metabolic process (IEA) | GO:2001060
  • donor selection (IEA) | GO:0007535
  • Factor XII activation (IEA) | GO:0002542
  • female gamete generation (IEA) | GO:0007292
  • galactose to glucose-1-phosphate metabolic process (IEA) | GO:0061612
  • germarium-derived oocyte fate determination (IEA) | GO:0007294
  • glycolytic process from glycerol (IEA) | GO:0061613
  • glycolytic process through fructose-6-phosphate (IEA) | GO:0061615
  • heme A biosynthetic process (IEA) | GO:0006784
  • heme biosynthetic process (IEA) | GO:0006783
  • homoserine metabolic process (IEA) | GO:0009092
  • induction by virus of host reticulophagy (IEA) | GO:0140883
  • induction of apoptosis by extracellular signals (IEA) | GO:0008624
  • intraciliary retrograde transport (IEA) | GO:0035721
  • leukocyte chemotaxis involved in inflammatory response (IEA) | GO:0002232
  • lysine biosynthetic process via diaminopimelate (IEA) | GO:0009089
  • maltoheptaose catabolic process (IEA) | GO:2001123
  • methane biosynthetic process from methanethiol (IEA) | GO:2001133
  • micronucleus organization (IEA) | GO:0032125
  • microtubule cytoskeleton organization involved in mitosis (IEA) | GO:1902850
  • mitochondrial membrane organization (IEA) | GO:0007006
  • mitotic S phase (IEA) | GO:0000084
  • modulation by host of symbiont molecular function (IEA) | GO:0052428
  • multicellular organism development (IEA) | GO:0007275
  • negative regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate biosynthetic process (IEA) | GO:1902647
  • negative regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolic process (IEA) | GO:1902642
  • negative regulation of cellular glucuronidation (IEA) | GO:2001030
  • negative regulation of complement-dependent cytotoxicity (IEA) | GO:1903660
  • negative regulation of intrinsic apoptotic signaling pathway (IEA) | GO:2001243
  • negative regulation of L-glutamine biosynthetic process (IEA) | GO:0062133
  • negative regulation of low-density lipoprotein particle receptor catabolic process (IEA) | GO:0032804
  • negative regulation of metanephric nephron tubule epithelial cell differentiation (IEA) | GO:0072308
  • negative regulation of mRNA binding (IEA) | GO:1904572
  • negative regulation of PERK-mediated unfolded protein response (IEA) | GO:1903898
  • negative regulation of response to drug (IEA) | GO:2001024
  • negative regulation of ubiquinone biosynthetic process (IEA) | GO:1904774
  • neutral lipid metabolic process (IEA) | GO:0006638
  • Notch signaling pathway involved in negative regulation of venous endothelial cell fate commitment (IEA) | GO:2000796
  • obsolete extracellular carbohydrate transport (IEA) | GO:0006859
  • obsolete histone H3-K56 deacetylation (IEA) | GO:0071572
  • obsolete histone H4-K20 demethylation (IEA) | GO:0035574
  • obsolete induction by organism of defense-related symbiont reactive oxygen species production (IEA) | GO:0052401
  • obsolete mRNA endonucleolytic cleavage involved in unfolded protein response (IEA) | GO:0070055
  • obsolete positive regulation of 1-phosphatidylinositol-3-kinase activity (IEA) | GO:0061903
  • obsolete regulation of cellular ketone metabolic process by regulation of transcription from RNA polymerase II promoter (IEA) | GO:0072364
  • obsolete regulation of histone H3-K27 methylation (IEA) | GO:0061085
  • obsolete reproduction (IEA) | GO:0000003
  • ommochrome biosynthetic process (IEA) | GO:0006727
  • phagocytosis (IEA) | GO:0006909
  • plant-type cell wall modification (IEA) | GO:0009827
  • positive regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolic process (IEA) | GO:1902643
  • positive regulation of dendrite extension (IEA) | GO:1903861
  • positive regulation of embryonic pattern specification (IEA) | GO:1902877
  • positive regulation of oxidative phosphorylation (IEA) | GO:1903862
  • positive regulation of phospholipid translocation (IEA) | GO:0061092
  • positive regulation of protein autoubiquitination (IEA) | GO:1902499
  • positive regulation of siRNA processing (IEA) | GO:1903705
  • pronephric glomerulus morphogenesis (IEA) | GO:0035775
  • propan-2-ol biosynthetic process (IEA) | GO:1902640
  • protein localization to old growing cell tip (IEA) | GO:1903858
  • pyrimidine nucleotide salvage (IEA) | GO:0032262
  • regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate biosynthetic process (IEA) | GO:1902646
  • regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolic process (IEA) | GO:1902641
  • regulation of beta-glucan metabolic process (IEA) | GO:0032950
  • regulation of bile acid metabolic process (IEA) | GO:1904251
  • regulation of cellular response to hepatocyte growth factor stimulus (IEA) | GO:2001112
  • regulation of complement-dependent cytotoxicity (IEA) | GO:1903659
  • regulation of cytokinin dehydrogenase activity (IEA) | GO:1903856
  • regulation of gibberellic acid mediated signaling pathway (IEA) | GO:0009937
  • regulation of long-chain fatty acid import across plasma membrane (IEA) | GO:0010746
  • regulation of microglial cell migration (IEA) | GO:1904139
  • regulation of phosphatidylcholine biosynthetic process (IEA) | GO:2001245
  • regulation of phosphorus utilization (IEA) | GO:0006795
  • regulation of plant epidermal cell differentiation (IEA) | GO:1903888
  • release of sequestered calcium ion into cytosol by endoplasmic reticulum (IEA) | GO:1903514
  • response to ethylene (IEA) | GO:0009723
  • response to reactive oxygen species (IEA) | GO:0000302
  • response to singlet oxygen (IEA) | GO:0000304
  • retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum (IEA) | GO:0006890
  • sesquiterpenoid biosynthetic process (IEA) | GO:0016106
  • somatic diversification of immune receptors (IEA) | GO:0002200
  • sperm aster formation (IEA) | GO:0035044
  • spermatogonial cell division (IEA) | GO:0007284
  • synaptic vesicle priming (IEA) | GO:0016082
  • tertiary alcohol biosynthetic process (IEA) | GO:1902645
  • transcription by RNA polymerase V (IEA) | GO:0001060

Domains

  • ( PF05786 ) Condensin complex subunit 2

Gene Expression Profile

Vegetative Cell Cycle (Zhang et al., 2023)

GeneMania

Tetrahymena Stock Center

No Data fetched for Tetrahymena Stock Center

Homologs

No Data fetched for Homologs

General Information

No Data fetched for General Information

Associated Literature

  1. Ref:29237819: Howard-Till R, Loidl J (2018) Condensins promote chromosome individualization and segregation during mitosis, meiosis, and amitosis in Tetrahymena thermophila. Molecular biology of the cell 29(4):466-478

Sequences

>TTHERM_01299730(coding)
ATGAATCGTCAGCCAAGGCGTAAAACAGAAAATAACTACAAAGATGTGATAGAGGAAGAA
ATAAACGATTTAGTAACTCATGAAGAAAATGTGTTAAATATAGCAGCTGGAAATAAATTA
AAATTGCAAAATAAAAATTCACGCAAAATTTCAAACGAAATAGATGATGACGAAGAAGAT
GAAGAAATAGATTTCATAGATTCGCAAGATGCAAGTAATGGAGCTGCTGAAAAGTTATAG
CGTGTTTATAGATAGCTATTAAAAAACAAAATTAAGGTAGACAATGTCTTCGATATTTAA
TGGGATGAAAAAACTAAATTAGCAGATTTAGATTGGTAGAGCTCTGCTAATTTCTTAGAT
ACTATTAGTAAAGTTTGGGGCATTAAGGTAGAAAAGACTCATAAAGATACCTATAGAATT
TTGGGAAACCTTATCCGTTCCGAGATCTAAGATCCGGAAGAAGAAGTTGATCCATCAAAA
AAGATAAAAGAAAACTTAGATTTAGCAAAAATATTATCTAAAGCTATTTAAAGACAAACC
AATGACTAATATGGTGCCAAAACACTTGAAAAAAATCCTGATAATTTAGATGTTGTTACA
TACGACATAGAATTTGATGTTGATCCACTCTTTAAAAAAACTTCTGCTAAATTTGACGAG
TAGGGTGCAAGTGGATTACTTATAAATAACCTTTATATGGATTCAAATATGATGCTTATG
CTTGAATCACATCAACCTAATGAGTAAAAGGCTGAAGAAGAGGAGCGTAAAGAAATGTTA
ACATAAAAATCTTTACAATAAAACTTATCTCAAGAGTGCTCTAATTATTGGAGAATTGTA
GATACTAACAATCTCTTTTCTAGCAAATGCTCAATTGCAGAAAGGTTATCAAATTTTAAA
AAACTCCTTACATCTTCAGAAGATGAAAACACTTTAGTTAAATTGAATAATGAAGTTACA
TAGATGAACAGTAAATTAAAGCAAAACTCTTAAAAAACAACAGCTTCTGAATAGAATATA
AGTGCTTAACCTGTAATTGATGAAGTTAGAGTAGATATCTTGAATGATGATGAATTATAA
GCATTATATGATTAAGGAGTAGTTGATCCATTTGGCAAAGATGAGCTTTACGGCTCTAAT
AGATAAAAAACAAGCAGCTTAGCTGGTTTTATCGTAGATGACGATGATGATGATAGTAGT
AAAAAATAAAGGTTAGGTGATAATGAATAAAAGAATAAGAAGGAAAGTGTTATAGAGGCT
ATTATTGTAGAAGAAAGTGAGGAGGACGAAGAAAAATAAAAAGCAATAAATGGTGTAGAA
GAAGCAGAGGAGAGAAAAGATTAAGAAAAACCAAACAAAAAGGTGGATGAAGGAGAGGAT
GAAGAAGACGAAGAAGAAAAAAAACTTAAATAATAAGAATAGGATGATGAAGATGACAAA
AAAGTTGTCTTATTCACTGAAGCTAAAGAAAAGTAAAGTGATGAAGAAGATGAAGATAAA
GCCAAAAGCGATGAAGAGGATTCCGTAGAAGAAATGGAAGAAGAGGAAGATGAAGAAGGT
AATATAGTTAAGAGAAGAAAAGTTAAGGGTCCCTTAGATTTTGCAGGAATCGACGAAAAA
CTTAAAACAGTAGGTAGAGGTATGCATAAGAAATTCAATGAAGAATTTAATGAGTTACCT
CAGCCTAAAACTAACAAGAAGAAGAAGAAAAACAAAAAATCTGGTGATGATGAGGAAGAA
AATAAAAAATATTTCGACTTTAATACTAAAATAACTGAAAAAGTGGATATCATTTTGGCA
AATAAAAAGAAAAGAACTATTAAAGATTATTTAAAAAGTGTTAAGTTTATATTCGAAGAT
AAAGATCATTTATTTTTGAGTGATAAAATTTTTATGAAAATGACAGAAGGTCTAACTAAT
CCATTTAATGTTAATGAAATGTACTTAGAAATGAAAAATAACAAAAACGAACCTGCAATT
AATGAAAATATTTTACCAGAAATCAATATAGATGATAATGATGATTCTTTAGATATTAAT
AATAACTTCAGAAACTTATTTGCTTTAAATTATGGTAATGATGAAGAAGACGAAGAAAAA
TTCAAAGAGCAAAAGAATCATGTTAAAATAAGAGATTTAAAGAGAAAACTTTGGGACAAA
TTAAGATCTAAAATTTTAGAAAACCATGCTAATTTCTAGAAGTAAAAACAAACAAGAAAG
AAATAAGAAAAGGAAGAAATGGAATAAATTCAATTCACTAATATGATGACTGAATTACCA
AGTATGTTCGGAGAAAGTGCTAAAAGAGTATCAATGCAATCATGCTTTATCACAATCTTG
CATTTAGCGAATGAATAAACATTAAAATTAAGCAATTAAGAAGGAGAAGACTTTGGTATA
ACAAAAGAATCTAAAGCTGACTTGGCACAGGAATTGTTAGAATTAAAGAGATAATAAGAA
TAAGAAGAAGAACAAGAAAAACTCAAAAAGATTGAAGAAGAAGAAATTAATGAAGATGAA
GAAGAAGACCTTTAAAATAGTGGTAAAAAATCTAAAGGTGTATCTGATAATTTAAATGGA
AATTAAAACATTGAAAAAATGTAGCTAGAGTGA


>TTHERM_01299730(gene)
TGAATCTTTCAAAAGTTAAGGATTATCTTTAAATAATAAATAATAAGAATAACTATAGAT
CTAATTATAAATATTCTTAAGTGTTTAATTCCCATTTTAAGTAATACGATTAGAAATATT
AGAATTATAGAAAATTAACTGAAATGAATCGTCAGCCAAGGCGTAAAACAGAAAATAACT
ACAAAGATGTGATAGAGGAAGAAATAAACGATTTAGTAACTCATGAAGAAAATGTGTTAA
ATATAGCAGCTGGAAATAAATTAAAATTGCAAAATAAAAATTCACGCAAAATTTCAAACG
AAATAGATGATGACGAAGAAGATGAAGAAATAGATTTCATAGATTCGCAAGATGCAAGTA
ATGGAGCTGCTGAAAAGTTATAGCGTGTTTATAGATAGCTATTAAAAAACAAAATTAAGG
TAGACAATGTCTTCGATATTTAATGGGATGAAAAAACTAAATTAGCAGATTTAGATTGGT
AGAGCTCTGCTAATTTCTTAGATACTATTAGTAAAGTTTGGGGCATTAAGGTAGAAAAGA
CTCATAAAGATACCTATAGAATTTTGGGAAACCTTATCCGTTCCGAGATCTAAGATCCGG
AAGAAGAAGTTGATCCATCAAAAAAGATAAAAGAAAACTTAGATTTAGCAAAAATATTAT
CTAAAGCTATTTAAAGACAAACCAATGACTAATATGGTGCCAAAACACTTGAAAAAAATC
CTGATAATTTAGATGTTGTTACATACGACATAGAATTTGATGTTGATCCACTCTTTAAAA
AAACTTCTGCTAAATTTGACGAGTAGGGTGCAAGTGGATTACTTATAAATAACCTTTATA
TGGATTCAAATATGATGCTTATGCTTGAATCACATCAACCTAATGAGTAAAAGGCTGAAG
AAGAGGAGCGTAAAGAAATGTTAACATAAAAATCTTTACAATAAAACTTATCTCAAGAGT
GCTCTAATTATTGGAGAATTGTAGATACTAACAATCTCTTTTCTAGCAAATGCTCAATTG
CAGAAAGGTTATCAAATTTTAAAAAACTCCTTACATCTTCAGAAGATGAAAACACTTTAG
TTAAATTGAATAATGAAGTTACATAGATGAACAGTAAATTAAAGCAAAACTCTTAAAAAA
CAACAGCTTCTGAATAGAATATAAGTGCTTAACCTGTAATTGATGAAGTTAGAGTAGATA
TCTTGAATGATGATGAATTATAAGCATTATATGATTAAGGAGTAGTTGATCCATTTGGCA
AAGATGAGCTTTACGGCTCTAATAGATAAAAAACAAGCAGCTTAGCTGGTTTTATCGTAG
ATGACGATGATGATGATAGTAGTAAAAAATAAAGGTTAGGTGATAATGAATAAAAGAATA
AGAAGGAAAGTGTTATAGAGGCTATTATTGTAGAAGAAAGTGAGGAGGACGAAGAAAAAT
AAAAAGCAATAAATGGTGTAGAAGAAGCAGAGGAGAGAAAAGATTAAGAAAAACCAAACA
AAAAGGTGGATGAAGGAGAGGATGAAGAAGACGAAGAAGAAAAAAAACTTAAATAATAAG
AATAGGATGATGAAGATGACAAAAAAGTTGTCTTATTCACTGAAGCTAAAGAAAAGTAAA
GTGATGAAGAAGATGAAGATAAAGCCAAAAGCGATGAAGAGGATTCCGTAGAAGAAATGG
AAGAAGAGGAAGATGAAGAAGGTAATATAGTTAAGAGAAGAAAAGTTAAGGGTCCCTTAG
ATTTTGCAGGAATCGACGAAAAACTTAAAACAGTAGGTAGAGGTATGCATAAGAAATTCA
ATGAAGAATTTAATGAGTTACCTCAGCCTAAAACTAACAAGAAGAAGAAGAAAAACAAAA
AATCTGGTGATGATGAGGAAGAAAATAAAAAATATTTCGACTTTAATACTAAAATAACTG
AAAAAGTGGATATCATTTTGGCAAATAAAAAGAAAAGAACTATTAAAGATTATTTAAAAA
GTGTTAAGTTTATATTCGAAGATAAAGATCATTTATTTTTGAGTGATAAAATTTTTATGA
AAATGACAGAAGGTCTAACTAATCCATTTAATGTTAATGAAATGTACTTAGAAATGAAAA
ATAACAAAAACGAACCTGCAATTAATGAAAATATTTTACCAGAAATCAATATAGATGATA
ATGATGATTCTTTAGATATTAATAATAACTTCAGAAACTTATTTGCTTTAAATTATGGTA
ATGATGAAGAAGACGAAGAAAAATTCAAAGAGCAAAAGAATCATGTTAAAATAAGAGATT
TAAAGAGAAAACTTTGGGACAAATTAAGATCTAAAATTTTAGAAAACCATGCTAATTTCT
AGAAGTAAAAACAAACAAGAAAGAAATAAGAAAAGGAAGAAATGGAATAAATTCAATTCA
CTAATATGATGACTGAATTACCAAGTATGTTCGGAGAAAGTGCTAAAAGAGTATCAATGC
AATCATGCTTTATCACAATCTTGCATTTAGCGAATGAATAAACATTAAAATTAAGCAATT
AAGAAGGAGAAGACTTTGGTATAACAAAAGAATCTAAAGCTGACTTGGCACAGGAATTGT
TAGAATTAAAGAGATAATAAGAATAAGAAGAAGAACAAGAAAAACTCAAAAAGATTGAAG
AAGAAGAAATTAATGAAGATGAAGAAGAAGACCTTTAAAATAGTGGTAAAAAATCTAAAG
GTGTATCTGATAATTTAAATGGAAATTAAAACATTGAAAAAATGTAGCTAGAGTGATTTA
TATTTATCAAACATAAATTCTATAGTAGATGATACATAAATACATGAATAAATAAATGAA
TATTTTTATAAATTAAATTGGCTTAAGTTAAAATAAACTTGTAATAAAATTGTTTAATTT
TTTCTGTAAAGTATCTTACTATTTAGGTGTGTTAGTTAATATTTATTTTATTTGATCATA
AAAAAAGATTAATTAATTT


>TTHERM_01299730(protein)
MNRQPRRKTENNYKDVIEEEINDLVTHEENVLNIAAGNKLKLQNKNSRKISNEIDDDEED
EEIDFIDSQDASNGAAEKLQRVYRQLLKNKIKVDNVFDIQWDEKTKLADLDWQSSANFLD
TISKVWGIKVEKTHKDTYRILGNLIRSEIQDPEEEVDPSKKIKENLDLAKILSKAIQRQT
NDQYGAKTLEKNPDNLDVVTYDIEFDVDPLFKKTSAKFDEQGASGLLINNLYMDSNMMLM
LESHQPNEQKAEEEERKEMLTQKSLQQNLSQECSNYWRIVDTNNLFSSKCSIAERLSNFK
KLLTSSEDENTLVKLNNEVTQMNSKLKQNSQKTTASEQNISAQPVIDEVRVDILNDDELQ
ALYDQGVVDPFGKDELYGSNRQKTSSLAGFIVDDDDDDSSKKQRLGDNEQKNKKESVIEA
IIVEESEEDEEKQKAINGVEEAEERKDQEKPNKKVDEGEDEEDEEEKKLKQQEQDDEDDK
KVVLFTEAKEKQSDEEDEDKAKSDEEDSVEEMEEEEDEEGNIVKRRKVKGPLDFAGIDEK
LKTVGRGMHKKFNEEFNELPQPKTNKKKKKNKKSGDDEEENKKYFDFNTKITEKVDIILA
NKKKRTIKDYLKSVKFIFEDKDHLFLSDKIFMKMTEGLTNPFNVNEMYLEMKNNKNEPAI
NENILPEINIDDNDDSLDINNNFRNLFALNYGNDEEDEEKFKEQKNHVKIRDLKRKLWDK
LRSKILENHANFQKQKQTRKKQEKEEMEQIQFTNMMTELPSMFGESAKRVSMQSCFITIL
HLANEQTLKLSNQEGEDFGITKESKADLAQELLELKRQQEQEEEQEKLKKIEEEEINEDE
EEDLQNSGKKSKGVSDNLNGNQNIEKMQLE